EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: YGL063W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 1113
Position: chrVII:383654-384766
Accession: S000003031
RBP type: canonical RBP
Summary: Mitochondrial tRNA:pseudouridine synthase%3B acts at positions 27 and 28%2C but not at position 72%3B efficiently and rapidly targeted to mitochondria%2C specifically dedicated to mitochondrial tRNA modification%3B mutation also affects pseudouridylation of some nuclear-encoded mRNAs%3B PUS2 has a paralog%2C PUS1%2C that arose from the whole genome duplication

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YGL063W_mRNA	PseudoU_synth_1	PF01416.20	1.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YGL063W_mRNA	-	1113	-	YGL063W_mRNA	370 (aa)	-	P53167

Gene Model

Click here to download YGL063W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YGL063W's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YGL063W	-	97	42.298	YPL212C	-	69	42.298

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YGL063W	-	96	31.319	ENSG00000177192	PUS1	78	31.492	Homo_sapiens
YGL063W	-	95	31.768	ENSAPOG00000007254	pus1	71	31.768	Acanthochromis_polyacanthus
YGL063W	-	94	31.285	ENSAMEG00000013715	PUS1	72	31.285	Ailuropoda_melanoleuca
YGL063W	-	95	30.532	ENSAOCG00000022207	pus1	71	30.532	Amphiprion_ocellaris
YGL063W	-	95	30.704	ENSAPEG00000006039	pus1	76	30.704	Amphiprion_percula
YGL063W	-	76	48.739	ENSATEG00000020688	pus1	73	48.739	Anabas_testudineus
YGL063W	-	95	30.471	ENSACAG00000007367	PUS1	80	30.471	Anolis_carolinensis
YGL063W	-	90	30.000	ENSANAG00000036192	PUS1	85	30.000	Aotus_nancymaae
YGL063W	-	60	46.218	ENSAMXG00000008710	pus1	53	46.218	Astyanax_mexicanus
YGL063W	-	95	31.680	ENSCAFG00000006429	PUS1	74	31.680	Canis_familiaris
YGL063W	-	95	31.680	ENSCAFG00020010737	PUS1	69	31.680	Canis_lupus_dingo
YGL063W	-	95	30.854	ENSCPOG00000001027	PUS1	70	30.854	Cavia_porcellus
YGL063W	-	95	31.215	ENSCCAG00000015879	PUS1	76	30.294	Cebus_capucinus
YGL063W	-	96	30.769	ENSCATG00000032870	PUS1	76	30.588	Cercocebus_atys
YGL063W	-	95	30.387	ENSCLAG00000011689	PUS1	70	30.854	Chinchilla_lanigera
YGL063W	-	96	31.044	ENSCSAG00000001879	PUS1	70	31.044	Chlorocebus_sabaeus
YGL063W	-	78	35.537	ENSCSAVG00000003751	-	61	35.537	Ciona_savignyi
YGL063W	-	70	47.059	ENSCVAG00000001265	pus1	64	47.059	Cyprinodon_variegatus
YGL063W	-	94	31.092	ENSDARG00000045562	pus1	71	31.092	Danio_rerio
YGL063W	-	94	31.476	ENSDNOG00000045576	PUS1	68	31.476	Dasypus_novemcinctus
YGL063W	-	89	30.178	ENSDORG00000011455	Pus1	83	30.178	Dipodomys_ordii
YGL063W	-	85	31.348	FBgn0038811	PUS1	63	31.348	Drosophila_melanogaster
YGL063W	-	97	30.435	ENSETEG00000019160	PUS1	75	30.189	Echinops_telfairi
YGL063W	-	86	32.099	ENSEBUG00000000368	-	50	32.099	Eptatretus_burgeri
YGL063W	-	95	32.231	ENSEASG00005016535	PUS1	69	32.231	Equus_asinus_asinus
YGL063W	-	95	32.231	ENSECAG00000006965	PUS1	74	32.231	Equus_caballus
YGL063W	-	97	30.435	ENSFCAG00000010780	PUS1	72	30.435	Felis_catus
YGL063W	-	98	30.108	ENSFALG00000008273	PUS1	72	30.108	Ficedula_albicollis
YGL063W	-	97	30.081	ENSFDAG00000012518	PUS1	74	30.081	Fukomys_damarensis
YGL063W	-	65	46.218	ENSFHEG00000010504	pus1	60	46.218	Fundulus_heteroclitus
YGL063W	-	65	42.857	ENSGMOG00000008143	pus1	64	42.857	Gadus_morhua
YGL063W	-	95	30.084	ENSGALG00000002354	PUS1	72	30.084	Gallus_gallus
YGL063W	-	96	31.319	ENSGGOG00000009178	PUS1	74	30.882	Gorilla_gorilla
YGL063W	-	95	30.663	ENSHGLG00000016086	PUS1	76	30.387	Heterocephalus_glaber_female
YGL063W	-	95	30.387	ENSHGLG00100019362	PUS1	76	30.110	Heterocephalus_glaber_male
YGL063W	-	95	32.133	ENSIPUG00000010387	pus1	75	32.133	Ictalurus_punctatus
YGL063W	-	94	31.755	ENSJJAG00000000088	Pus1	70	31.755	Jaculus_jaculus
YGL063W	-	66	45.378	ENSKMAG00000012702	pus1	60	45.378	Kryptolebias_marmoratus
YGL063W	-	76	45.378	ENSLBEG00000002845	pus1	71	45.378	Labrus_bergylta
YGL063W	-	98	33.333	ENSLACG00000016044	-	94	33.333	Latimeria_chalumnae
YGL063W	-	94	30.914	ENSLAFG00000028731	PUS1	84	30.914	Loxodonta_africana
YGL063W	-	95	31.215	ENSMFAG00000041194	PUS1	76	30.588	Macaca_fascicularis
YGL063W	-	95	31.492	ENSMMUG00000031463	PUS1	79	30.882	Macaca_mulatta
YGL063W	-	96	31.044	ENSMNEG00000002814	PUS1	76	30.588	Macaca_nemestrina
YGL063W	-	90	30.882	ENSMLEG00000043560	PUS1	85	30.882	Mandrillus_leucophaeus
YGL063W	-	95	30.084	ENSMAMG00000007371	pus1	71	30.084	Mastacembelus_armatus
YGL063W	-	95	30.663	ENSMICG00000030980	PUS1	74	30.663	Microcebus_murinus
YGL063W	-	85	31.153	ENSMALG00000013202	pus1	62	31.153	Monopterus_albus
YGL063W	-	95	30.110	ENSMPUG00000002314	PUS1	75	30.110	Mustela_putorius_furo
YGL063W	-	95	31.198	ENSNLEG00000008505	PUS1	87	30.678	Nomascus_leucogenys
YGL063W	-	95	30.854	ENSODEG00000008248	PUS1	78	30.854	Octodon_degus
YGL063W	-	61	30.935	ENSOANG00000000406	PUS3	54	30.935	Ornithorhynchus_anatinus
YGL063W	-	94	30.919	ENSOCUG00000007310	PUS1	64	30.919	Oryctolagus_cuniculus
YGL063W	-	94	30.168	ENSOGAG00000008720	PUS1	77	30.168	Otolemur_garnettii
YGL063W	-	96	31.593	ENSPPAG00000040971	PUS1	74	31.176	Pan_paniscus
YGL063W	-	97	30.435	ENSPPRG00000015456	PUS1	77	30.435	Panthera_pardus
YGL063W	-	95	31.111	ENSPTIG00000004201	PUS1	77	31.111	Panthera_tigris_altaica
YGL063W	-	96	31.593	ENSPTRG00000005643	PUS1	74	31.176	Pan_troglodytes
YGL063W	-	96	31.044	ENSPANG00000000376	PUS1	76	30.588	Papio_anubis
YGL063W	-	65	44.538	ENSPMGG00000004522	pus1	64	44.538	Periophthalmus_magnuspinnatus
YGL063W	-	95	31.593	ENSPMAG00000004636	pus1	90	31.593	Petromyzon_marinus
YGL063W	-	85	30.094	ENSPREG00000007231	pus1	73	30.094	Poecilia_reticulata
YGL063W	-	96	30.769	ENSPPYG00000005132	PUS1	71	30.769	Pongo_abelii
YGL063W	-	95	31.856	ENSPNAG00000003938	pus1	70	31.856	Pygocentrus_nattereri
YGL063W	-	95	30.939	ENSSBOG00000023593	PUS1	75	30.939	Saimiri_boliviensis_boliviensis
YGL063W	-	98	30.000	ENSSHAG00000013193	PUS1	75	30.000	Sarcophilus_harrisii
YGL063W	-	76	46.218	ENSSMAG00000019075	pus1	68	46.218	Scophthalmus_maximus
YGL063W	-	95	31.198	ENSSPAG00000006272	pus1	76	31.198	Stegastes_partitus
YGL063W	-	95	30.110	ENSSSCG00000009741	PUS1	74	30.110	Sus_scrofa
YGL063W	-	95	30.110	ENSTTRG00000000632	PUS1	70	30.110	Tursiops_truncatus
YGL063W	-	95	31.492	ENSUAMG00000017197	PUS1	76	31.492	Ursus_americanus
YGL063W	-	95	31.492	ENSUMAG00000002831	PUS1	89	31.389	Ursus_maritimus
YGL063W	-	95	31.680	ENSVVUG00000004199	PUS1	68	31.680	Vulpes_vulpes
YGL063W	-	74	38.710	ENSXETG00000033640	-	88	38.710	Xenopus_tropicalis
YGL063W	-	86	32.209	ENSXETG00000002030	pus1	66	32.209	Xenopus_tropicalis