EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YGL099W (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: KRE35
Full Name: Putative GTPase involved in 60S ribosomal subunit biogenesis%3B required for the release of Nmd3p from 60S subunits in the cytoplasm
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1923 bases
Position: chrVII:314631-316553
Accession: S000003067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YGL099W_mRNA	MMR_HSR1	PF01926.23	1.2e-16	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YGL099W_mRNA	-	1923	-	YGL099W_mRNA	640 (aa)	-	P53145

Gene Model

Click here to download YGL099W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YGL099W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YGL099W	LSG1	68	58.084	ENSG00000041802	LSG1	92	36.000	Homo_sapiens
YGL099W	LSG1	76	40.441	ENSAPOG00000009694	lsg1	83	40.977	Acanthochromis_polyacanthus
YGL099W	LSG1	67	56.548	ENSAMEG00000009343	LSG1	64	56.548	Ailuropoda_melanoleuca
YGL099W	LSG1	70	43.313	ENSACIG00000012406	lsg1	82	42.026	Amphilophus_citrinellus
YGL099W	LSG1	69	53.977	ENSAOCG00000016066	lsg1	83	41.011	Amphiprion_ocellaris
YGL099W	LSG1	76	41.098	ENSAPEG00000003252	lsg1	83	42.176	Amphiprion_percula
YGL099W	LSG1	70	44.135	ENSATEG00000011794	lsg1	89	42.243	Anabas_testudineus
YGL099W	LSG1	70	39.306	ENSACAG00000004222	LSG1	60	56.886	Anolis_carolinensis
YGL099W	LSG1	74	46.753	ENSANAG00000021153	LSG1	74	46.320	Aotus_nancymaae
YGL099W	LSG1	69	54.438	ENSACLG00000000520	lsg1	76	44.770	Astatotilapia_calliptera
YGL099W	LSG1	67	47.556	ENSAMXG00000008271	lsg1	78	40.232	Astyanax_mexicanus
YGL099W	LSG1	70	58.084	ENSBTAG00000008461	LSG1	63	58.084	Bos_taurus
YGL099W	LSG1	76	42.245	WBGene00016907	C53H9.2	84	44.882	Caenorhabditis_elegans
YGL099W	LSG1	74	45.887	ENSCJAG00000013962	LSG1	74	45.455	Callithrix_jacchus
YGL099W	LSG1	64	56.886	ENSCAFG00000013445	LSG1	64	56.886	Canis_familiaris
YGL099W	LSG1	68	55.882	ENSCAFG00020002216	LSG1	65	55.882	Canis_lupus_dingo
YGL099W	LSG1	65	56.886	ENSCHIG00000015769	LSG1	63	56.287	Capra_hircus
YGL099W	LSG1	68	56.287	ENSTSYG00000001447	LSG1	65	56.287	Carlito_syrichta
YGL099W	LSG1	64	51.445	ENSCAPG00000009856	LSG1	82	41.326	Cavia_aperea
YGL099W	LSG1	74	45.455	ENSCCAG00000035744	LSG1	74	45.022	Cebus_capucinus
YGL099W	LSG1	74	46.983	ENSCATG00000042060	LSG1	74	46.121	Cercocebus_atys
YGL099W	LSG1	68	58.683	ENSCSAG00000008796	LSG1	68	46.552	Chlorocebus_sabaeus
YGL099W	LSG1	65	55.294	ENSCPBG00000015941	LSG1	52	55.294	Chrysemys_picta_bellii
YGL099W	LSG1	75	43.004	ENSCING00000007079	-	98	42.769	Ciona_intestinalis
YGL099W	LSG1	70	45.676	ENSCSAVG00000002514	-	92	43.601	Ciona_savignyi
YGL099W	LSG1	68	58.084	ENSCANG00000030709	LSG1	66	58.084	Colobus_angolensis_palliatus
YGL099W	LSG1	65	58.084	ENSCGRG00001019846	Lsg1	83	40.437	Cricetulus_griseus_chok1gshd
YGL099W	LSG1	65	58.084	ENSCGRG00000014617	Lsg1	72	47.210	Cricetulus_griseus_crigri
YGL099W	LSG1	72	42.330	ENSCSEG00000008522	lsg1	85	40.325	Cynoglossus_semilaevis
YGL099W	LSG1	70	42.147	ENSCVAG00000002484	lsg1	81	41.399	Cyprinodon_variegatus
YGL099W	LSG1	64	54.706	ENSDARG00000015352	lsg1	77	41.602	Danio_rerio
YGL099W	LSG1	67	59.281	ENSDNOG00000006224	LSG1	62	59.281	Dasypus_novemcinctus
YGL099W	LSG1	74	43.762	FBgn0266284	Ns3	81	43.625	Drosophila_melanogaster
YGL099W	LSG1	58	45.497	ENSEBUG00000003119	lsg1	63	43.056	Eptatretus_burgeri
YGL099W	LSG1	68	58.683	ENSEASG00005000678	LSG1	62	58.683	Equus_asinus_asinus
YGL099W	LSG1	74	48.899	ENSECAG00000017659	LSG1	70	48.458	Equus_caballus
YGL099W	LSG1	76	41.651	ENSELUG00000023973	lsg1	82	41.651	Esox_lucius
YGL099W	LSG1	68	57.485	ENSFCAG00000024957	LSG1	65	57.485	Felis_catus
YGL099W	LSG1	64	54.645	ENSFALG00000007210	LSG1	66	49.541	Ficedula_albicollis
YGL099W	LSG1	65	56.886	ENSFDAG00000017373	LSG1	63	56.886	Fukomys_damarensis
YGL099W	LSG1	70	41.650	ENSFHEG00000003680	lsg1	82	40.590	Fundulus_heteroclitus
YGL099W	LSG1	69	46.491	ENSGMOG00000015834	lsg1	63	52.632	Gadus_morhua
YGL099W	LSG1	68	55.191	ENSGALG00000007058	LSG1	67	50.481	Gallus_gallus
YGL099W	LSG1	70	43.574	ENSGAFG00000015831	lsg1	81	41.746	Gambusia_affinis
YGL099W	LSG1	70	42.436	ENSGACG00000009323	lsg1	77	42.209	Gasterosteus_aculeatus
YGL099W	LSG1	68	57.485	ENSGGOG00000000520	LSG1	66	57.485	Gorilla_gorilla
YGL099W	LSG1	70	54.438	ENSHBUG00000005659	lsg1	82	35.609	Haplochromis_burtoni
YGL099W	LSG1	65	55.952	ENSHGLG00000017390	LSG1	65	55.952	Heterocephalus_glaber_female
YGL099W	LSG1	65	54.971	ENSHGLG00100018587	LSG1	65	54.971	Heterocephalus_glaber_male
YGL099W	LSG1	70	42.802	ENSHCOG00000016848	lsg1	77	42.023	Hippocampus_comes
YGL099W	LSG1	74	42.135	ENSIPUG00000008631	lsg1	81	41.948	Ictalurus_punctatus
YGL099W	LSG1	65	56.471	ENSJJAG00000015513	Lsg1	64	56.471	Jaculus_jaculus
YGL099W	LSG1	71	42.254	ENSKMAG00000009681	lsg1	78	43.434	Kryptolebias_marmoratus
YGL099W	LSG1	71	44.191	ENSLBEG00000024261	lsg1	82	41.829	Labrus_bergylta
YGL099W	LSG1	70	61.078	ENSLACG00000013399	LSG1	65	61.078	Latimeria_chalumnae
YGL099W	LSG1	60	59.064	ENSLOCG00000004918	lsg1	82	41.953	Lepisosteus_oculatus
YGL099W	LSG1	68	57.485	ENSLAFG00000012919	-	68	57.485	Loxodonta_africana
YGL099W	LSG1	68	58.683	ENSMFAG00000039903	LSG1	65	58.084	Macaca_fascicularis
YGL099W	LSG1	68	58.683	ENSMMUG00000010708	LSG1	66	58.683	Macaca_mulatta
YGL099W	LSG1	68	58.683	ENSMNEG00000031538	LSG1	65	58.084	Macaca_nemestrina
YGL099W	LSG1	74	47.414	ENSMLEG00000041184	LSG1	74	46.983	Mandrillus_leucophaeus
YGL099W	LSG1	75	40.267	ENSMAMG00000000470	lsg1	83	39.925	Mastacembelus_armatus
YGL099W	LSG1	70	54.438	ENSMZEG00005017865	lsg1	82	35.609	Maylandia_zebra
YGL099W	LSG1	51	56.376	ENSMGAG00000007050	LSG1	57	56.977	Meleagris_gallopavo
YGL099W	LSG1	70	56.886	ENSMAUG00000016976	Lsg1	83	41.002	Mesocricetus_auratus
YGL099W	LSG1	75	46.581	ENSMICG00000049087	LSG1	76	46.154	Microcebus_murinus
YGL099W	LSG1	65	56.886	ENSMOCG00000022136	Lsg1	62	56.886	Microtus_ochrogaster
YGL099W	LSG1	74	43.579	ENSMMOG00000008884	lsg1	80	44.008	Mola_mola
YGL099W	LSG1	76	38.256	ENSMODG00000019828	LSG1	84	35.714	Monodelphis_domestica
YGL099W	LSG1	65	58.084	MGP_CAROLIEiJ_G0020648	Lsg1	83	39.820	Mus_caroli
YGL099W	LSG1	68	57.485	ENSMUSG00000022538	Lsg1	82	40.402	Mus_musculus
YGL099W	LSG1	68	58.084	MGP_PahariEiJ_G0016352	Lsg1	66	58.084	Mus_pahari
YGL099W	LSG1	63	58.084	MGP_SPRETEiJ_G0021544	Lsg1	82	40.585	Mus_spretus
YGL099W	LSG1	68	58.683	ENSMPUG00000003734	LSG1	65	58.683	Mustela_putorius_furo
YGL099W	LSG1	70	57.738	ENSMLUG00000012548	LSG1	67	57.738	Myotis_lucifugus
YGL099W	LSG1	62	56.287	ENSNGAG00000021872	Lsg1	59	56.287	Nannospalax_galili
YGL099W	LSG1	68	57.485	ENSNLEG00000008293	LSG1	66	57.485	Nomascus_leucogenys
YGL099W	LSG1	70	53.889	ENSONIG00000002635	lsg1	78	44.856	Oreochromis_niloticus
YGL099W	LSG1	60	55.294	ENSOANG00000012742	LSG1	60	55.294	Ornithorhynchus_anatinus
YGL099W	LSG1	68	57.485	ENSOCUG00000004817	LSG1	65	57.485	Oryctolagus_cuniculus
YGL099W	LSG1	71	42.742	ENSORLG00000007695	lsg1	82	40.684	Oryzias_latipes
YGL099W	LSG1	70	41.851	ENSORLG00020016286	lsg1	82	40.075	Oryzias_latipes_hni
YGL099W	LSG1	71	42.653	ENSORLG00015012025	lsg1	82	40.962	Oryzias_latipes_hsok
YGL099W	LSG1	71	41.414	ENSOMEG00000022379	lsg1	83	39.810	Oryzias_melastigma
YGL099W	LSG1	70	47.598	ENSOGAG00000003475	LSG1	69	47.162	Otolemur_garnettii
YGL099W	LSG1	71	55.952	ENSOARG00000020403	LSG1	63	55.952	Ovis_aries
YGL099W	LSG1	68	58.084	ENSPPAG00000029271	LSG1	66	58.084	Pan_paniscus
YGL099W	LSG1	68	56.322	ENSPPRG00000010281	LSG1	66	56.322	Panthera_pardus
YGL099W	LSG1	68	58.683	ENSPTIG00000010789	LSG1	65	58.683	Panthera_tigris_altaica
YGL099W	LSG1	68	58.084	ENSPTRG00000015760	LSG1	66	58.084	Pan_troglodytes
YGL099W	LSG1	68	58.084	ENSPANG00000018249	LSG1	65	57.485	Papio_anubis
YGL099W	LSG1	70	40.755	ENSPKIG00000002895	lsg1	77	41.948	Paramormyrops_kingsleyae
YGL099W	LSG1	60	52.326	ENSPSIG00000009821	LSG1	60	52.326	Pelodiscus_sinensis
YGL099W	LSG1	70	41.800	ENSPMGG00000000931	lsg1	81	41.400	Periophthalmus_magnuspinnatus
YGL099W	LSG1	63	58.084	ENSPEMG00000012082	-	61	58.084	Peromyscus_maniculatus_bairdii
YGL099W	LSG1	75	39.432	ENSPMAG00000007451	lsg1	66	57.059	Petromyzon_marinus
YGL099W	LSG1	60	60.674	ENSPCIG00000013890	LSG1	56	60.674	Phascolarctos_cinereus
YGL099W	LSG1	70	41.929	ENSPFOG00000021882	lsg1	82	41.111	Poecilia_formosa
YGL099W	LSG1	70	42.126	ENSPLAG00000019536	lsg1	82	41.296	Poecilia_latipinna
YGL099W	LSG1	70	41.176	ENSPMEG00000017281	lsg1	82	40.406	Poecilia_mexicana
YGL099W	LSG1	70	36.986	ENSPREG00000006048	lsg1	81	37.017	Poecilia_reticulata
YGL099W	LSG1	68	58.084	ENSPPYG00000014425	LSG1	71	58.084	Pongo_abelii
YGL099W	LSG1	74	47.436	ENSPCOG00000012360	LSG1	74	47.009	Propithecus_coquereli
YGL099W	LSG1	69	54.438	ENSPNYG00000021994	lsg1	76	44.770	Pundamilia_nyererei
YGL099W	LSG1	70	41.860	ENSPNAG00000015533	lsg1	78	41.279	Pygocentrus_nattereri
YGL099W	LSG1	63	57.485	ENSRNOG00000001727	Lsg1	60	57.485	Rattus_norvegicus
YGL099W	LSG1	68	58.683	ENSRBIG00000029053	LSG1	75	46.552	Rhinopithecus_bieti
YGL099W	LSG1	68	58.683	ENSRROG00000037702	LSG1	75	46.552	Rhinopithecus_roxellana
YGL099W	LSG1	74	46.320	ENSSBOG00000034938	LSG1	74	45.887	Saimiri_boliviensis_boliviensis
YGL099W	LSG1	52	55.645	ENSSHAG00000003487	LSG1	57	56.647	Sarcophilus_harrisii
YGL099W	LSG1	75	41.068	ENSSFOG00015008955	lsg1	82	40.706	Scleropages_formosus
YGL099W	LSG1	67	51.064	ENSSDUG00000004622	lsg1	85	38.036	Seriola_dumerili
YGL099W	LSG1	73	41.699	ENSSLDG00000010869	lsg1	84	40.182	Seriola_lalandi_dorsalis
YGL099W	LSG1	69	57.647	ENSSPUG00000016347	LSG1	69	56.688	Sphenodon_punctatus
YGL099W	LSG1	69	55.030	ENSSPAG00000005508	lsg1	82	42.256	Stegastes_partitus
YGL099W	LSG1	65	52.096	ENSSSCG00000011827	LSG1	83	38.849	Sus_scrofa
YGL099W	LSG1	53	53.086	ENSTGUG00000009068	LSG1	58	53.086	Taeniopygia_guttata
YGL099W	LSG1	71	40.117	ENSTRUG00000017380	lsg1	82	39.154	Takifugu_rubripes
YGL099W	LSG1	75	41.791	ENSTNIG00000015570	lsg1	83	41.101	Tetraodon_nigroviridis
YGL099W	LSG1	69	56.051	ENSTTRG00000000559	LSG1	67	56.051	Tursiops_truncatus
YGL099W	LSG1	65	57.485	ENSUAMG00000012454	LSG1	70	57.485	Ursus_americanus
YGL099W	LSG1	65	57.485	ENSUMAG00000000855	LSG1	65	57.485	Ursus_maritimus
YGL099W	LSG1	59	56.886	ENSVPAG00000012400	LSG1	59	56.886	Vicugna_pacos
YGL099W	LSG1	64	55.689	ENSVVUG00000008956	LSG1	62	55.689	Vulpes_vulpes
YGL099W	LSG1	72	48.357	ENSXETG00000003451	lsg1	85	40.072	Xenopus_tropicalis
YGL099W	LSG1	70	42.604	ENSXCOG00000003239	lsg1	82	41.002	Xiphophorus_couchianus
YGL099W	LSG1	70	43.058	ENSXMAG00000005536	lsg1	81	41.399	Xiphophorus_maculatus