EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: YGL171W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-dependent ATPase%3B involved in pre-rRNA processing at sites A0%2C A1%2C and A2%2C and in control of cell cycle progression%3B contains two upstream open reading frames (uORFs) in 5' untranslated region which regulate translation
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 1695 bases
Position: chrVII:182390-184084
Accession: S000003139
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YGL171W_mRNA	ResIII	PF04851.15	1.8e-05	1	1
YGL171W_mRNA	DEAD	PF00270.29	2.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YGL171W_mRNA	-	1695	-	YGL171W_mRNA	564 (aa)	-	P45818

Gene Model

Click here to download YGL171W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YGL171W's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YGL171W	-	71	31.250	YHR065C	-	80	31.250
YGL171W	-	60	32.194	YMR290C	-	63	31.532
YGL171W	-	71	32.057	YPL119C	DBP1	68	31.193
YGL171W	-	71	30.714	YJL033W	HCA4	53	30.714
YGL171W	-	65	31.522	YKR059W	TIF1	89	31.522
YGL171W	-	59	32.402	YFL002C	-	60	31.635
YGL171W	-	67	33.167	YDR243C	-	66	33.167
YGL171W	-	63	32.312	YDR021W	-	87	32.312
YGL171W	-	65	31.522	YJL138C	TIF2	89	31.522
YGL171W	-	69	33.753	YGL078C	-	74	33.501
YGL171W	-	73	31.019	YOR204W	DED1	69	31.019
YGL171W	-	71	34.314	YNL112W	-	72	34.314

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YGL171W	-	99	39.216	ENSG00000278053	DDX52	98	39.934	Homo_sapiens
YGL171W	-	79	45.011	ENSAPOG00000008759	ddx52	63	45.011	Acanthochromis_polyacanthus
YGL171W	-	80	44.783	ENSAMEG00000013159	DDX52	98	39.339	Ailuropoda_melanoleuca
YGL171W	-	73	46.635	ENSACIG00000002843	ddx52	73	46.154	Amphilophus_citrinellus
YGL171W	-	79	44.766	ENSAOCG00000007983	ddx52	69	45.116	Amphiprion_ocellaris
YGL171W	-	79	44.766	ENSAOCG00000000356	-	63	45.011	Amphiprion_ocellaris
YGL171W	-	79	44.766	ENSAPEG00000023456	ddx52	63	45.011	Amphiprion_percula
YGL171W	-	81	44.301	ENSATEG00000021525	ddx52	66	44.301	Anabas_testudineus
YGL171W	-	79	41.871	ENSACAG00000006395	DDX52	85	41.871	Anolis_carolinensis
YGL171W	-	99	39.903	ENSANAG00000028587	DDX52	98	40.686	Aotus_nancymaae
YGL171W	-	81	44.828	ENSACLG00000021447	ddx52	72	44.828	Astatotilapia_calliptera
YGL171W	-	77	44.749	ENSAMXG00000024377	ddx52	71	44.176	Astyanax_mexicanus
YGL171W	-	79	45.233	ENSBTAG00000010313	DDX52	74	45.676	Bos_taurus
YGL171W	-	71	38.061	WBGene00011032	R05D11.4	95	33.277	Caenorhabditis_elegans
YGL171W	-	98	40.296	ENSCJAG00000015190	DDX52	98	40.625	Callithrix_jacchus
YGL171W	-	98	40.000	ENSCAFG00000013554	-	98	40.331	Canis_familiaris
YGL171W	-	98	39.803	ENSCAFG00000018145	-	98	40.132	Canis_familiaris
YGL171W	-	94	40.582	ENSCAFG00020003753	DDX52	96	40.925	Canis_lupus_dingo
YGL171W	-	79	45.455	ENSCHIG00000006275	DDX52	99	39.664	Capra_hircus
YGL171W	-	82	45.513	ENSTSYG00000002996	DDX52	76	45.940	Carlito_syrichta
YGL171W	-	78	39.013	ENSCAPG00000010436	DDX52	80	39.462	Cavia_aperea
YGL171W	-	96	39.629	ENSCPOG00000001232	DDX52	97	39.966	Cavia_porcellus
YGL171W	-	98	40.523	ENSCCAG00000023213	DDX52	98	40.850	Cebus_capucinus
YGL171W	-	80	46.320	ENSCATG00000041437	DDX52	98	40.264	Cercocebus_atys
YGL171W	-	91	41.199	ENSCLAG00000016292	DDX52	88	41.573	Chinchilla_lanigera
YGL171W	-	98	39.934	ENSCSAG00000006122	DDX52	98	40.264	Chlorocebus_sabaeus
YGL171W	-	71	43.382	ENSCPBG00000009806	DDX52	72	41.202	Chrysemys_picta_bellii
YGL171W	-	79	41.775	ENSCING00000016218	-	97	41.775	Ciona_intestinalis
YGL171W	-	69	43.367	ENSCSAVG00000003835	-	95	43.367	Ciona_savignyi
YGL171W	-	98	40.000	ENSCANG00000035140	DDX52	98	40.331	Colobus_angolensis_palliatus
YGL171W	-	99	39.647	ENSCGRG00001020695	Ddx52	99	40.323	Cricetulus_griseus_chok1gshd
YGL171W	-	99	39.486	ENSCGRG00000008830	Ddx52	99	40.161	Cricetulus_griseus_crigri
YGL171W	-	77	44.091	ENSCSEG00000010008	ddx52	64	44.091	Cynoglossus_semilaevis
YGL171W	-	77	46.136	ENSCVAG00000005302	ddx52	73	46.136	Cyprinodon_variegatus
YGL171W	-	77	44.091	ENSDARG00000100505	ddx52	75	43.041	Danio_rerio
YGL171W	-	79	45.676	ENSDNOG00000047454	DDX52	74	46.120	Dasypus_novemcinctus
YGL171W	-	96	40.436	ENSDORG00000004276	Ddx52	97	40.604	Dipodomys_ordii
YGL171W	-	74	45.261	FBgn0036754	CG5589	70	45.261	Drosophila_melanogaster
YGL171W	-	77	41.686	ENSETEG00000016042	DDX52	94	38.112	Echinops_telfairi
YGL171W	-	54	42.079	ENSEBUG00000010838	-	73	42.079	Eptatretus_burgeri
YGL171W	-	98	39.073	ENSEASG00005011275	DDX52	91	39.404	Equus_asinus_asinus
YGL171W	-	98	39.238	ENSECAG00000012286	DDX52	98	39.570	Equus_caballus
YGL171W	-	73	46.411	ENSELUG00000018002	ddx52	72	46.411	Esox_lucius
YGL171W	-	99	39.216	ENSFCAG00000010573	DDX52	99	39.542	Felis_catus
YGL171W	-	79	43.527	ENSFALG00000005155	DDX52	98	37.255	Ficedula_albicollis
YGL171W	-	96	38.889	ENSFDAG00000008340	-	96	39.057	Fukomys_damarensis
YGL171W	-	96	34.746	ENSFDAG00000011133	-	96	35.085	Fukomys_damarensis
YGL171W	-	82	43.441	ENSFHEG00000017239	ddx52	69	43.441	Fundulus_heteroclitus
YGL171W	-	76	45.727	ENSGMOG00000014879	ddx52	76	45.727	Gadus_morhua
YGL171W	-	79	43.046	ENSGALG00000005489	DDX52	75	42.765	Gallus_gallus
YGL171W	-	77	45.682	ENSGAFG00000000702	ddx52	68	45.682	Gambusia_affinis
YGL171W	-	77	45.701	ENSGACG00000020624	ddx52	91	45.701	Gasterosteus_aculeatus
YGL171W	-	71	44.363	ENSGAGG00000007234	DDX52	69	42.984	Gopherus_agassizii
YGL171W	-	99	39.216	ENSGGOG00000028224	DDX52	98	39.934	Gorilla_gorilla
YGL171W	-	81	44.828	ENSHBUG00000015638	ddx52	67	44.828	Haplochromis_burtoni
YGL171W	-	75	35.032	ENSHGLG00000019205	-	88	34.755	Heterocephalus_glaber_female
YGL171W	-	94	39.249	ENSHGLG00000006235	-	96	39.590	Heterocephalus_glaber_female
YGL171W	-	78	45.393	ENSHGLG00100013765	-	81	45.843	Heterocephalus_glaber_male
YGL171W	-	75	35.032	ENSHGLG00100018699	-	89	34.755	Heterocephalus_glaber_male
YGL171W	-	77	45.249	ENSHCOG00000007966	ddx52	78	45.249	Hippocampus_comes
YGL171W	-	77	43.864	ENSIPUG00000008623	ddx52	70	43.864	Ictalurus_punctatus
YGL171W	-	96	40.401	ENSJJAG00000021877	Ddx52	97	40.735	Jaculus_jaculus
YGL171W	-	79	45.111	ENSKMAG00000022270	ddx52	96	45.614	Kryptolebias_marmoratus
YGL171W	-	80	44.372	ENSLBEG00000015403	ddx52	67	44.372	Labrus_bergylta
YGL171W	-	95	37.797	ENSLACG00000012514	DDX52	97	37.480	Latimeria_chalumnae
YGL171W	-	73	53.947	ENSLOCG00000005928	ddx52	89	53.947	Lepisosteus_oculatus
YGL171W	-	70	45.771	ENSLAFG00000002635	DDX52	100	46.250	Loxodonta_africana
YGL171W	-	80	46.320	ENSMFAG00000000640	DDX52	98	40.264	Macaca_fascicularis
YGL171W	-	98	39.836	ENSMMUG00000002980	DDX52	98	40.594	Macaca_mulatta
YGL171W	-	80	46.104	ENSMNEG00000043658	DDX52	98	40.099	Macaca_nemestrina
YGL171W	-	98	40.429	ENSMLEG00000017518	DDX52	98	40.759	Mandrillus_leucophaeus
YGL171W	-	77	46.364	ENSMAMG00000019719	ddx52	64	46.364	Mastacembelus_armatus
YGL171W	-	81	44.828	ENSMZEG00005019044	ddx52	67	44.828	Maylandia_zebra
YGL171W	-	79	43.207	ENSMGAG00000008091	DDX52	79	42.981	Meleagris_gallopavo
YGL171W	-	82	45.319	ENSMAUG00000021084	Ddx52	77	45.745	Mesocricetus_auratus
YGL171W	-	77	39.863	ENSMICG00000004290	-	72	40.091	Microcebus_murinus
YGL171W	-	99	39.708	ENSMOCG00000009654	Ddx52	99	40.194	Microtus_ochrogaster
YGL171W	-	77	45.000	ENSMMOG00000018825	ddx52	70	45.000	Mola_mola
YGL171W	-	98	37.898	ENSMODG00000002493	DDX52	99	38.217	Monodelphis_domestica
YGL171W	-	77	45.682	ENSMALG00000007621	ddx52	77	44.828	Monopterus_albus
YGL171W	-	82	45.299	MGP_CAROLIEiJ_G0016888	Ddx52	76	45.726	Mus_caroli
YGL171W	-	99	39.742	ENSMUSG00000020677	Ddx52	99	40.065	Mus_musculus
YGL171W	-	99	39.677	MGP_PahariEiJ_G0018018	Ddx52	99	40.194	Mus_pahari
YGL171W	-	99	39.742	MGP_SPRETEiJ_G0017733	Ddx52	99	40.065	Mus_spretus
YGL171W	-	96	40.201	ENSMPUG00000015007	DDX52	97	40.536	Mustela_putorius_furo
YGL171W	-	78	44.989	ENSMLUG00000024480	-	90	45.657	Myotis_lucifugus
YGL171W	-	80	44.035	ENSMLUG00000007167	-	98	38.614	Myotis_lucifugus
YGL171W	-	99	40.650	ENSNGAG00000020686	Ddx52	99	40.976	Nannospalax_galili
YGL171W	-	77	45.909	ENSNBRG00000007750	ddx52	77	45.909	Neolamprologus_brichardi
YGL171W	-	96	40.369	ENSNLEG00000002826	DDX52	97	40.704	Nomascus_leucogenys
YGL171W	-	70	43.142	ENSMEUG00000011234	DDX52	98	43.641	Notamacropus_eugenii
YGL171W	-	79	36.947	ENSOPRG00000003899	DDX52	97	33.445	Ochotona_princeps
YGL171W	-	95	39.028	ENSODEG00000012814	-	99	39.363	Octodon_degus
YGL171W	-	81	43.723	ENSODEG00000002857	-	82	44.348	Octodon_degus
YGL171W	-	81	45.043	ENSONIG00000004869	ddx52	74	44.397	Oreochromis_niloticus
YGL171W	-	80	44.469	ENSOANG00000007133	DDX52	75	44.469	Ornithorhynchus_anatinus
YGL171W	-	79	45.011	ENSOCUG00000014532	DDX52	97	39.130	Oryctolagus_cuniculus
YGL171W	-	77	45.227	ENSORLG00000005241	ddx52	71	43.534	Oryzias_latipes
YGL171W	-	77	45.227	ENSORLG00015015546	ddx52	67	43.534	Oryzias_latipes_hsok
YGL171W	-	78	45.169	ENSOMEG00000017602	ddx52	66	45.169	Oryzias_melastigma
YGL171W	-	79	44.835	ENSOGAG00000000868	DDX52	76	44.835	Otolemur_garnettii
YGL171W	-	79	45.455	ENSOARG00000002998	DDX52	74	45.898	Ovis_aries
YGL171W	-	99	40.133	ENSPPAG00000028453	DDX52	98	40.871	Pan_paniscus
YGL171W	-	99	39.601	ENSPPRG00000009742	DDX52	99	39.933	Panthera_pardus
YGL171W	-	99	39.601	ENSPTIG00000013697	DDX52	99	39.933	Panthera_tigris_altaica
YGL171W	-	98	39.769	ENSPTRG00000009058	DDX52	98	40.099	Pan_troglodytes
YGL171W	-	80	46.320	ENSPANG00000022101	DDX52	98	40.264	Papio_anubis
YGL171W	-	95	38.889	ENSPKIG00000013058	ddx52	95	38.889	Paramormyrops_kingsleyae
YGL171W	-	71	43.137	ENSPSIG00000010226	DDX52	73	41.778	Pelodiscus_sinensis
YGL171W	-	77	44.773	ENSPMGG00000005458	ddx52	86	44.318	Periophthalmus_magnuspinnatus
YGL171W	-	99	39.478	ENSPEMG00000003263	Ddx52	99	39.967	Peromyscus_maniculatus_bairdii
YGL171W	-	77	44.419	ENSPCIG00000017730	DDX52	65	44.875	Phascolarctos_cinereus
YGL171W	-	77	45.455	ENSPFOG00000018378	ddx52	69	44.181	Poecilia_formosa
YGL171W	-	77	45.455	ENSPLAG00000008368	ddx52	69	44.181	Poecilia_latipinna
YGL171W	-	77	45.455	ENSPMEG00000002359	ddx52	69	44.181	Poecilia_mexicana
YGL171W	-	77	45.227	ENSPREG00000016874	ddx52	69	44.397	Poecilia_reticulata
YGL171W	-	98	40.033	ENSPPYG00000008221	DDX52	98	40.362	Pongo_abelii
YGL171W	-	63	48.066	ENSPCAG00000005814	DDX52	59	48.066	Procavia_capensis
YGL171W	-	80	44.805	ENSPVAG00000010462	DDX52	75	45.238	Pteropus_vampyrus
YGL171W	-	77	45.909	ENSPNYG00000020730	ddx52	77	45.455	Pundamilia_nyererei
YGL171W	-	77	44.545	ENSPNAG00000014707	ddx52	72	43.886	Pygocentrus_nattereri
YGL171W	-	99	40.258	ENSRNOG00000002612	Ddx52	99	40.681	Rattus_norvegicus
YGL171W	-	98	36.378	ENSRBIG00000032462	DDX52	98	36.705	Rhinopithecus_bieti
YGL171W	-	98	36.424	ENSRROG00000034760	DDX52	98	36.755	Rhinopithecus_roxellana
YGL171W	-	80	46.320	ENSSBOG00000035787	DDX52	75	46.753	Saimiri_boliviensis_boliviensis
YGL171W	-	77	45.249	ENSSHAG00000013962	DDX52	70	45.701	Sarcophilus_harrisii
YGL171W	-	74	45.863	ENSSFOG00015005055	ddx52	77	45.227	Scleropages_formosus
YGL171W	-	77	44.773	ENSSMAG00000009788	ddx52	64	44.977	Scophthalmus_maximus
YGL171W	-	77	45.455	ENSSDUG00000004022	ddx52	69	44.017	Seriola_dumerili
YGL171W	-	77	45.558	ENSSLDG00000016999	ddx52	79	44.325	Seriola_lalandi_dorsalis
YGL171W	-	77	42.727	ENSSPUG00000000720	DDX52	70	42.266	Sphenodon_punctatus
YGL171W	-	77	45.558	ENSSPAG00000014211	ddx52	64	43.939	Stegastes_partitus
YGL171W	-	80	45.000	ENSSSCG00000021275	DDX52	75	45.000	Sus_scrofa
YGL171W	-	78	43.973	ENSTGUG00000008303	-	76	44.196	Taeniopygia_guttata
YGL171W	-	82	44.492	ENSTRUG00000017071	ddx52	67	44.492	Takifugu_rubripes
YGL171W	-	77	45.682	ENSTNIG00000009990	ddx52	75	44.276	Tetraodon_nigroviridis
YGL171W	-	98	39.245	ENSTTRG00000008917	DDX52	99	39.573	Tursiops_truncatus
YGL171W	-	98	38.972	ENSVPAG00000001979	DDX52	98	39.635	Vicugna_pacos
YGL171W	-	98	39.835	ENSVVUG00000020209	DDX52	99	42.086	Vulpes_vulpes
YGL171W	-	78	45.212	ENSXETG00000025903	ddx52	99	40.100	Xenopus_tropicalis
YGL171W	-	77	45.455	ENSXMAG00000010805	ddx52	69	43.966	Xiphophorus_maculatus