EuRBPDB

Description

Ensembl ID: YGL207W (Gene tree)
Gene ID: -
Gene Symbol: SPT16
Alias: CDC68|SSF1
Full Name: Subunit of the heterodimeric FACT complex (Spt16p-Pob3p)%3B FACT associates with chromatin via interaction with Nhp6Ap and Nhp6Bp%2C and reorganizes nucleosomes to facilitate access to DNA by RNA and DNA polymerases%3B specifically required for diauxic shift-induced H2B deposition onto rDNA genes%3B mutations cause reduced nucleosome occupancy over highly transcribed regions%3B coregulates transcription with Mot1p through preinitiation complex assembly and nucleosome organization
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 3108
Position: chrVII: 98969-102076
Accession: S000003175
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YGL207W_mRNA	-	3108	-	YGL207W_mRNA	1035 (aa)	-	P32558

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YGL207W	SPT16	99	33.365	FBgn0002183	dre4	93	33.833	Drosophila_melanogaster
YGL207W	SPT16	99	34.787	ENSG00000092201	SUPT16H	96	33.804	Homo_sapiens
YGL207W	SPT16	99	34.597	ENSMUSG00000035726	Supt16	96	33.522	Mus_musculus