EuRBPDB

Description

Ensembl ID: YGL232W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 928
Position: chrVII:62075-63002
Accession: S000003201
RBP type: canonical RBP
Summary: Putative tRNA acetyltransferase%3B RNA-binding protein required for the formation of the modified nucleoside N(4)-acetylcytidine in serine and leucine tRNAs but not required for the same modification in 18S rRNA%3B protein abundance increases in response to DNA replication stress

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YGL232W_mRNA	THUMP	PF02926.17	2.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YGL232W_mRNA	-	870	-	YGL232W_mRNA	289 (aa)	-	P53072

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YGL232W	-	94	30.182	ENSAPOG00000008440	thumpd1	79	30.182	Acanthochromis_polyacanthus
YGL232W	-	94	30.882	ENSACLG00000004830	thumpd1	79	30.357	Astatotilapia_calliptera
YGL232W	-	94	30.292	ENSCSEG00000002041	thumpd1	81	31.387	Cynoglossus_semilaevis
YGL232W	-	86	30.859	ENSCVAG00000014960	thumpd1	71	30.859	Cyprinodon_variegatus
YGL232W	-	96	30.824	ENSELUG00000013612	thumpd1	61	31.786	Esox_lucius
YGL232W	-	91	30.855	ENSGMOG00000003369	thumpd1	77	30.855	Gadus_morhua
YGL232W	-	94	30.545	ENSHBUG00000017996	thumpd1	79	30.357	Haplochromis_burtoni
YGL232W	-	94	31.884	ENSLBEG00000009349	thumpd1	79	31.884	Labrus_bergylta
YGL232W	-	94	30.037	ENSMAMG00000006858	thumpd1	77	30.037	Mastacembelus_armatus
YGL232W	-	94	30.545	ENSMZEG00005013693	thumpd1	79	30.357	Maylandia_zebra
YGL232W	-	54	30.968	ENSMGAG00000010340	THUMPD1	70	30.968	Meleagris_gallopavo
YGL232W	-	50	30.345	ENSOCUG00000025354	-	61	30.345	Oryctolagus_cuniculus
YGL232W	-	94	30.258	ENSOMEG00000019361	thumpd1	76	30.258	Oryzias_melastigma
YGL232W	-	54	30.968	ENSPPYG00000007160	-	52	30.968	Pongo_abelii
YGL232W	-	54	30.323	ENSPCAG00000001534	THUMPD1	51	30.323	Procavia_capensis
YGL232W	-	94	30.545	ENSPNYG00000007061	thumpd1	78	30.357	Pundamilia_nyererei
YGL232W	-	94	30.182	ENSSDUG00000014502	thumpd1	79	30.357	Seriola_dumerili
YGL232W	-	94	30.545	ENSSLDG00000007694	thumpd1	79	30.909	Seriola_lalandi_dorsalis