EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YGR063C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 309
Position: chrVII:617516-617824
Accession: S000003295
RBP type: canonical RBP
Summary: Spt4p/5p (DSIF) transcription elongation factor complex subunit%3B the Spt4/5 complex binds to ssRNA in a sequence-specific manner%2C and along with RNAP I and II has multiple roles regulating transcriptional elongation%2C RNA processing%2C quality control%2C and transcription-coupled repair%3B localizes to kinetochores and heterochromatin%2C influencing chromosomal dynamics and silencing%3B required for transcription through long trinucleotide repeats in ORFs and non-protein coding regions

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YGR063C_mRNA	Spt4	PF06093.13	2.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YGR063C_mRNA	-	309	-	YGR063C_mRNA	102 (aa)	-	P32914

Gene Model

Click here to download YGR063C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YGR063C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YGR063C	-	91	43.434	ENSG00000213246	SUPT4H1	85	43.434	Homo_sapiens
YGR063C	-	81	43.820	ENSAPOG00000006828	supt4h1	95	43.820	Acanthochromis_polyacanthus
YGR063C	-	91	43.434	ENSAMEG00000011686	SUPT4H1	85	43.434	Ailuropoda_melanoleuca
YGR063C	-	81	42.697	ENSACIG00000012162	supt4h1	95	42.697	Amphilophus_citrinellus
YGR063C	-	91	45.455	ENSAOCG00000022349	supt4h1	85	45.455	Amphiprion_ocellaris
YGR063C	-	91	45.455	ENSAPEG00000013170	supt4h1	85	45.455	Amphiprion_percula
YGR063C	-	91	45.455	ENSATEG00000005317	supt4h1	85	45.455	Anabas_testudineus
YGR063C	-	81	40.449	ENSAPLG00000012497	SUPT4H1	75	40.449	Anas_platyrhynchos
YGR063C	-	91	43.434	ENSANAG00000026628	SUPT4H1	85	43.434	Aotus_nancymaae
YGR063C	-	91	45.455	ENSACLG00000005475	supt4h1	85	45.455	Astatotilapia_calliptera
YGR063C	-	91	45.455	ENSAMXG00000041272	supt4h1	85	45.455	Astyanax_mexicanus
YGR063C	-	93	36.893	WBGene00005014	spt-4	86	36.893	Caenorhabditis_elegans
YGR063C	-	91	43.434	ENSCJAG00000017369	SUPT4H1	85	43.434	Callithrix_jacchus
YGR063C	-	91	43.434	ENSCAFG00000017524	SUPT4H1	85	43.434	Canis_familiaris
YGR063C	-	91	43.434	ENSCAFG00020025803	SUPT4H1	66	43.434	Canis_lupus_dingo
YGR063C	-	91	43.434	ENSCHIG00000026783	SUPT4H1	85	43.434	Capra_hircus
YGR063C	-	91	43.434	ENSTSYG00000030004	SUPT4H1	85	43.434	Carlito_syrichta
YGR063C	-	91	43.434	ENSCPOG00000031227	SUPT4H1	85	43.434	Cavia_porcellus
YGR063C	-	91	43.434	ENSCCAG00000034799	SUPT4H1	85	43.434	Cebus_capucinus
YGR063C	-	91	43.434	ENSCATG00000042435	SUPT4H1	85	43.434	Cercocebus_atys
YGR063C	-	90	34.375	ENSCATG00000024314	-	84	33.333	Cercocebus_atys
YGR063C	-	91	43.434	ENSCLAG00000011223	SUPT4H1	85	43.434	Chinchilla_lanigera
YGR063C	-	91	43.434	ENSCSAG00000005761	SUPT4H1	85	43.434	Chlorocebus_sabaeus
YGR063C	-	91	35.354	ENSCHOG00000000246	SUPT4H1	85	35.354	Choloepus_hoffmanni
YGR063C	-	94	42.157	ENSCING00000019520	spt4	84	42.157	Ciona_intestinalis
YGR063C	-	94	43.137	ENSCSAVG00000009479	-	84	43.137	Ciona_savignyi
YGR063C	-	91	43.434	ENSCANG00000034430	SUPT4H1	85	43.434	Colobus_angolensis_palliatus
YGR063C	-	91	43.434	ENSCGRG00001018056	Supt4a	85	43.434	Cricetulus_griseus_chok1gshd
YGR063C	-	91	43.434	ENSCGRG00000014047	Supt4a	85	43.434	Cricetulus_griseus_crigri
YGR063C	-	91	46.465	ENSCSEG00000010897	supt4h1	85	46.465	Cynoglossus_semilaevis
YGR063C	-	91	45.455	ENSCVAG00000014190	supt4h1	85	45.455	Cyprinodon_variegatus
YGR063C	-	91	44.444	ENSDARG00000113969	supt4h1	85	44.444	Danio_rerio
YGR063C	-	91	43.434	ENSDNOG00000032349	SUPT4H1	85	43.434	Dasypus_novemcinctus
YGR063C	-	91	43.434	ENSDORG00000002826	-	85	43.434	Dipodomys_ordii
YGR063C	-	76	38.750	ENSDORG00000030049	-	81	38.710	Dipodomys_ordii
YGR063C	-	94	36.275	FBgn0028683	spt4	88	36.275	Drosophila_melanogaster
YGR063C	-	59	48.438	ENSEBUG00000006884	supt4h1	84	48.438	Eptatretus_burgeri
YGR063C	-	91	43.434	ENSEASG00005002787	SUPT4H1	67	43.434	Equus_asinus_asinus
YGR063C	-	91	43.434	ENSECAG00000016585	SUPT4H1	85	43.434	Equus_caballus
YGR063C	-	91	45.455	ENSELUG00000019831	supt4h1	85	45.455	Esox_lucius
YGR063C	-	91	43.434	ENSFCAG00000018732	SUPT4H1	85	43.434	Felis_catus
YGR063C	-	81	40.449	ENSFALG00000013757	SUPT4H1	95	40.449	Ficedula_albicollis
YGR063C	-	91	43.434	ENSFDAG00000016718	SUPT4H1	85	43.434	Fukomys_damarensis
YGR063C	-	91	45.455	ENSFHEG00000009114	supt4h1	85	45.455	Fundulus_heteroclitus
YGR063C	-	95	43.689	ENSGMOG00000014619	supt4h1	88	43.689	Gadus_morhua
YGR063C	-	91	42.424	ENSGALG00000000944	SUPT4H1	85	42.424	Gallus_gallus
YGR063C	-	91	46.465	ENSGAFG00000014374	supt4h1	85	46.465	Gambusia_affinis
YGR063C	-	91	45.455	ENSGACG00000020237	supt4h1	85	45.455	Gasterosteus_aculeatus
YGR063C	-	91	43.434	ENSGGOG00000007232	SUPT4H1	85	43.434	Gorilla_gorilla
YGR063C	-	81	43.820	ENSHBUG00000022528	supt4h1	95	43.820	Haplochromis_burtoni
YGR063C	-	90	45.361	ENSHBUG00000000848	-	83	45.361	Haplochromis_burtoni
YGR063C	-	91	43.434	ENSHGLG00000005007	SUPT4H1	85	43.434	Heterocephalus_glaber_female
YGR063C	-	91	43.434	ENSHGLG00100018961	SUPT4H1	85	43.434	Heterocephalus_glaber_male
YGR063C	-	91	44.444	ENSHCOG00000010739	supt4h1	85	44.444	Hippocampus_comes
YGR063C	-	91	45.455	ENSIPUG00000012062	supt4h1	85	45.455	Ictalurus_punctatus
YGR063C	-	91	43.434	ENSJJAG00000010938	Supt4a	85	43.434	Jaculus_jaculus
YGR063C	-	91	45.455	ENSKMAG00000013119	supt4h1	85	45.455	Kryptolebias_marmoratus
YGR063C	-	91	46.465	ENSLBEG00000018308	supt4h1	85	46.465	Labrus_bergylta
YGR063C	-	93	43.564	ENSLACG00000016364	SUPT4H1	86	43.564	Latimeria_chalumnae
YGR063C	-	91	43.434	ENSLOCG00000002970	supt4h1	85	43.434	Lepisosteus_oculatus
YGR063C	-	91	43.434	ENSLAFG00000020718	SUPT4H1	85	43.434	Loxodonta_africana
YGR063C	-	92	33.673	ENSMFAG00000045087	-	84	33.333	Macaca_fascicularis
YGR063C	-	91	43.434	ENSMFAG00000003856	SUPT4H1	85	43.434	Macaca_fascicularis
YGR063C	-	91	43.434	ENSMMUG00000040655	SUPT4H1	85	43.434	Macaca_mulatta
YGR063C	-	92	33.673	ENSMMUG00000049176	-	83	33.673	Macaca_mulatta
YGR063C	-	90	34.375	ENSMNEG00000034957	-	84	33.333	Macaca_nemestrina
YGR063C	-	78	36.145	ENSMNEG00000032891	-	82	35.714	Macaca_nemestrina
YGR063C	-	91	43.434	ENSMNEG00000037471	SUPT4H1	85	43.434	Macaca_nemestrina
YGR063C	-	91	43.434	ENSMLEG00000013750	SUPT4H1	85	43.434	Mandrillus_leucophaeus
YGR063C	-	91	35.417	ENSMLEG00000040145	-	83	35.632	Mandrillus_leucophaeus
YGR063C	-	92	31.633	ENSMLEG00000031477	-	83	31.633	Mandrillus_leucophaeus
YGR063C	-	91	46.465	ENSMAMG00000006148	supt4h1	85	46.465	Mastacembelus_armatus
YGR063C	-	91	45.455	ENSMZEG00005023783	supt4h1	85	45.455	Maylandia_zebra
YGR063C	-	91	43.434	ENSMAUG00000013090	Supt4a	85	43.434	Mesocricetus_auratus
YGR063C	-	91	43.434	ENSMICG00000043219	SUPT4H1	85	43.434	Microcebus_murinus
YGR063C	-	91	43.434	ENSMOCG00000005545	Supt4a	85	43.434	Microtus_ochrogaster
YGR063C	-	81	44.944	ENSMMOG00000005411	supt4h1	95	44.944	Mola_mola
YGR063C	-	84	43.182	ENSMODG00000024427	-	75	43.182	Monodelphis_domestica
YGR063C	-	91	43.434	ENSMODG00000024938	-	85	43.434	Monodelphis_domestica
YGR063C	-	91	45.455	ENSMALG00000013156	supt4h1	85	45.455	Monopterus_albus
YGR063C	-	91	43.434	ENSMUSG00000020485	Supt4a	85	43.434	Mus_musculus
YGR063C	-	91	43.434	ENSMPUG00000015326	SUPT4H1	83	43.434	Mustela_putorius_furo
YGR063C	-	91	43.434	ENSMLUG00000025583	-	85	43.434	Myotis_lucifugus
YGR063C	-	91	41.414	ENSMLUG00000027172	-	85	41.414	Myotis_lucifugus
YGR063C	-	91	41.414	ENSMLUG00000028057	-	85	41.414	Myotis_lucifugus
YGR063C	-	91	42.424	ENSMLUG00000024867	-	85	42.424	Myotis_lucifugus
YGR063C	-	91	43.434	ENSNGAG00000015537	-	85	43.434	Nannospalax_galili
YGR063C	-	91	45.455	ENSNBRG00000016146	supt4h1	85	45.455	Neolamprologus_brichardi
YGR063C	-	95	37.864	ENSNLEG00000033851	-	93	37.864	Nomascus_leucogenys
YGR063C	-	91	43.434	ENSNLEG00000008159	-	85	43.434	Nomascus_leucogenys
YGR063C	-	91	34.021	ENSNLEG00000028366	-	67	34.021	Nomascus_leucogenys
YGR063C	-	91	43.434	ENSMEUG00000010164	SUPT4H1	85	43.434	Notamacropus_eugenii
YGR063C	-	91	43.434	ENSODEG00000011183	SUPT4H1	85	43.434	Octodon_degus
YGR063C	-	91	43.434	ENSOCUG00000025823	SUPT4H1	85	43.434	Oryctolagus_cuniculus
YGR063C	-	91	45.455	ENSORLG00000011097	supt4h1	85	45.455	Oryzias_latipes
YGR063C	-	91	45.455	ENSORLG00020018918	supt4h1	85	45.455	Oryzias_latipes_hni
YGR063C	-	91	45.455	ENSORLG00015001908	supt4h1	85	45.455	Oryzias_latipes_hsok
YGR063C	-	91	45.455	ENSOMEG00000009103	supt4h1	85	45.455	Oryzias_melastigma
YGR063C	-	91	43.434	ENSOGAG00000031972	SUPT4H1	85	43.434	Otolemur_garnettii
YGR063C	-	91	43.434	ENSOARG00000010021	SUPT4H1	85	43.434	Ovis_aries
YGR063C	-	91	43.434	ENSPPRG00000010997	SUPT4H1	85	43.434	Panthera_pardus
YGR063C	-	91	43.434	ENSPTIG00000006503	SUPT4H1	85	43.434	Panthera_tigris_altaica
YGR063C	-	91	43.434	ENSPTRG00000009451	SUPT4H1	85	43.434	Pan_troglodytes
YGR063C	-	92	31.633	ENSPANG00000031534	-	84	31.034	Papio_anubis
YGR063C	-	91	43.434	ENSPANG00000022280	SUPT4H1	85	43.434	Papio_anubis
YGR063C	-	91	41.414	ENSPKIG00000017008	supt4h1	83	41.414	Paramormyrops_kingsleyae
YGR063C	-	82	42.222	ENSPSIG00000008272	SUPT4H1	92	42.222	Pelodiscus_sinensis
YGR063C	-	84	43.478	ENSPMGG00000013558	supt4h1	95	43.478	Periophthalmus_magnuspinnatus
YGR063C	-	91	43.434	ENSPEMG00000001651	Supt4a	85	43.434	Peromyscus_maniculatus_bairdii
YGR063C	-	91	43.434	ENSPCIG00000015610	-	85	43.434	Phascolarctos_cinereus
YGR063C	-	80	38.095	ENSPCIG00000007509	-	74	38.095	Phascolarctos_cinereus
YGR063C	-	91	46.465	ENSPFOG00000018406	supt4h1	85	46.465	Poecilia_formosa
YGR063C	-	91	46.465	ENSPLAG00000012498	supt4h1	85	46.465	Poecilia_latipinna
YGR063C	-	91	46.465	ENSPMEG00000011887	supt4h1	85	46.465	Poecilia_mexicana
YGR063C	-	82	45.556	ENSPREG00000008031	supt4h1	71	45.556	Poecilia_reticulata
YGR063C	-	91	43.434	ENSPPYG00000008233	SUPT4H1	85	43.434	Pongo_abelii
YGR063C	-	91	43.434	ENSPCOG00000016589	SUPT4H1	85	43.434	Propithecus_coquereli
YGR063C	-	91	43.434	ENSPVAG00000002320	SUPT4H1	85	43.434	Pteropus_vampyrus
YGR063C	-	91	45.455	ENSPNYG00000016837	supt4h1	85	45.455	Pundamilia_nyererei
YGR063C	-	81	42.697	ENSPNAG00000009422	supt4h1	95	42.697	Pygocentrus_nattereri
YGR063C	-	91	43.434	ENSRNOG00000007845	Supt4h1	85	43.434	Rattus_norvegicus
YGR063C	-	91	43.434	ENSRBIG00000043489	SUPT4H1	85	43.434	Rhinopithecus_bieti
YGR063C	-	91	43.434	ENSRROG00000045659	SUPT4H1	85	43.434	Rhinopithecus_roxellana
YGR063C	-	91	43.434	ENSSBOG00000031578	SUPT4H1	85	43.434	Saimiri_boliviensis_boliviensis
YGR063C	-	57	48.387	ENSSFOG00015001230	supt4h1	82	48.387	Scleropages_formosus
YGR063C	-	91	45.455	ENSSMAG00000000422	supt4h1	85	45.455	Scophthalmus_maximus
YGR063C	-	91	45.455	ENSSDUG00000017639	supt4h1	85	45.455	Seriola_dumerili
YGR063C	-	91	45.455	ENSSLDG00000019831	supt4h1	85	45.455	Seriola_lalandi_dorsalis
YGR063C	-	91	42.424	ENSSPUG00000001513	SUPT4H1	85	42.424	Sphenodon_punctatus
YGR063C	-	91	45.455	ENSSPAG00000017849	supt4h1	85	45.455	Stegastes_partitus
YGR063C	-	91	43.434	ENSSSCG00000034752	SUPT4H1	85	43.434	Sus_scrofa
YGR063C	-	91	45.455	ENSTRUG00000021118	supt4h1	85	45.455	Takifugu_rubripes
YGR063C	-	91	45.455	ENSTNIG00000008553	supt4h1	85	45.455	Tetraodon_nigroviridis
YGR063C	-	91	43.434	ENSUAMG00000005160	SUPT4H1	85	43.434	Ursus_americanus
YGR063C	-	91	43.434	ENSUMAG00000022805	SUPT4H1	85	43.434	Ursus_maritimus
YGR063C	-	81	41.573	ENSVPAG00000009628	SUPT4H1	95	41.573	Vicugna_pacos
YGR063C	-	91	43.434	ENSVVUG00000012505	SUPT4H1	85	43.434	Vulpes_vulpes
YGR063C	-	93	34.653	ENSXETG00000025331	supt4h1	86	34.653	Xenopus_tropicalis
YGR063C	-	81	44.944	ENSXCOG00000005652	supt4h1	95	44.944	Xiphophorus_couchianus
YGR063C	-	91	46.465	ENSXMAG00000005633	supt4h1	85	46.465	Xiphophorus_maculatus