EuRBPDB

Description

Ensembl ID: YGR093W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1524
Position: chrVII:670388-671911
Accession: S000003325
RBP type: canonical RBP
Summary: Splicing factor that modulates turnover of branched RNAs by Dbr1p%3B interacts with spliceosomal components and branched RNA splicing products%3B enhances Dbr1p debranching in vitro%3B conserved protein with domain organization identical from yeast to human%3B N-terminal homology to Dbr1p N-terminus%2C but Dbr1p catalytic residues not conserved%3B relocalizes to the cytosol in response to hypoxia

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YGR093W_mRNA	CwfJ_C_1	PF04677.15	1.1e-42	1	1
YGR093W_mRNA	CwfJ_C_2	PF04676.14	3.7e-15	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YGR093W_mRNA	-	1524	-	YGR093W_mRNA	507 (aa)	-	P53255

Gene Model

Protein-Protein Interaction (PPI)