EuRBPDB

Description

Ensembl ID: YGR095C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Exosome non-catalytic core component%3B involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm%3B has similarity to E. coli RNase PH and to human hRrp46p (EXOSC5)
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 672 bases
Position: chrVII:675671-676342
Accession: S000003327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YGR095C_mRNA	RNase_PH	PF01138.21	5.2e-20	1	1
YGR095C_mRNA	RNase_PH_C	PF03725.15	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YGR095C_mRNA	-	672	-	YGR095C_mRNA	223 (aa)	-	P53256

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YGR095C	-	86	30.890	ENSATEG00000008886	exosc5	88	30.890	Anabas_testudineus
YGR095C	-	83	30.811	ENSEEUG00000007299	EXOSC5	72	30.811	Erinaceus_europaeus
YGR095C	-	96	30.047	ENSFDAG00000001207	EXOSC5	85	30.047	Fukomys_damarensis
YGR095C	-	67	32.000	ENSMFAG00000045851	EXOSC5	62	31.788	Macaca_fascicularis
YGR095C	-	96	30.137	ENSMODG00000008642	EXOSC5	84	30.137	Monodelphis_domestica
YGR095C	-	83	31.746	ENSNLEG00000013696	EXOSC5	85	30.415	Nomascus_leucogenys
YGR095C	-	74	30.000	ENSPCIG00000016745	EXOSC5	78	30.000	Phascolarctos_cinereus
YGR095C	-	97	30.045	ENSPMEG00000020815	exosc5	88	30.045	Poecilia_mexicana
YGR095C	-	67	32.667	ENSSBOG00000031753	EXOSC5	70	32.450	Saimiri_boliviensis_boliviensis
YGR095C	-	97	30.455	ENSSPAG00000018306	exosc5	90	30.455	Stegastes_partitus
YGR095C	-	83	30.811	ENSSSCG00000003015	EXOSC5	77	30.811	Sus_scrofa