EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YGR145W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Component of the SSU%3B required for pre-18S rRNA processing%2C biogenesis of the small ribosomal subunit%3B interacts with U3 snoRNA%2C Mpp10p and Bfr2p%3B contains WD repeats%2C and has homology to Spb1p
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 2124 bases
Position: chrVII:781767-783890
Accession: S000003377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YGR145W_mRNA	NUC153	PF08159.12	1.5e-11	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YGR145W_mRNA	-	2124	-	YGR145W_mRNA	707 (aa)	-	P48234

Gene Model

Click here to download YGR145W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YGR145W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YGR145W	-	74	46.011	ENSG00000115761	NOL10	95	40.762	Homo_sapiens
YGR145W	-	75	44.280	ENSAPOG00000006771	nol10	76	44.649	Acanthochromis_polyacanthus
YGR145W	-	72	46.374	ENSAMEG00000011438	NOL10	79	44.784	Ailuropoda_melanoleuca
YGR145W	-	75	43.796	ENSACIG00000011256	nol10	74	44.259	Amphilophus_citrinellus
YGR145W	-	75	44.022	ENSAOCG00000001044	nol10	75	44.022	Amphiprion_ocellaris
YGR145W	-	75	44.669	ENSAPEG00000023044	nol10	77	44.669	Amphiprion_percula
YGR145W	-	75	44.444	ENSATEG00000011452	nol10	77	44.424	Anabas_testudineus
YGR145W	-	72	47.137	ENSAPLG00000009885	NOL10	80	44.938	Anas_platyrhynchos
YGR145W	-	88	41.793	ENSACAG00000012738	NOL10	78	45.455	Anolis_carolinensis
YGR145W	-	74	46.197	ENSANAG00000024937	NOL10	95	41.275	Aotus_nancymaae
YGR145W	-	75	44.444	ENSACLG00000026238	nol10	78	44.444	Astatotilapia_calliptera
YGR145W	-	72	45.541	ENSAMXG00000014006	nol10	71	45.731	Astyanax_mexicanus
YGR145W	-	74	45.672	ENSBTAG00000002716	NOL10	77	45.672	Bos_taurus
YGR145W	-	70	36.660	WBGene00017989	nol-10	68	37.214	Caenorhabditis_elegans
YGR145W	-	74	46.197	ENSCJAG00000006602	NOL10	95	41.202	Callithrix_jacchus
YGR145W	-	74	46.197	ENSCAFG00000003435	NOL10	79	45.324	Canis_familiaris
YGR145W	-	74	46.197	ENSCAFG00020026722	NOL10	79	45.324	Canis_lupus_dingo
YGR145W	-	74	41.468	ENSCHIG00000012935	NOL10	77	41.468	Capra_hircus
YGR145W	-	74	46.041	ENSTSYG00000010119	NOL10	88	42.654	Carlito_syrichta
YGR145W	-	82	42.320	ENSCAPG00000011046	NOL10	78	45.009	Cavia_aperea
YGR145W	-	87	43.218	ENSCPOG00000007706	NOL10	89	43.218	Cavia_porcellus
YGR145W	-	92	40.620	ENSCCAG00000027373	NOL10	95	40.382	Cebus_capucinus
YGR145W	-	74	46.382	ENSCATG00000043643	NOL10	94	41.298	Cercocebus_atys
YGR145W	-	78	44.930	ENSCLAG00000002234	NOL10	79	45.601	Chinchilla_lanigera
YGR145W	-	74	46.382	ENSCSAG00000007229	NOL10	94	41.298	Chlorocebus_sabaeus
YGR145W	-	73	42.243	ENSCHOG00000002784	NOL10	83	41.667	Choloepus_hoffmanni
YGR145W	-	83	39.546	ENSCING00000005632	-	74	41.948	Ciona_intestinalis
YGR145W	-	85	40.645	ENSCSAVG00000004855	-	75	44.299	Ciona_savignyi
YGR145W	-	74	36.989	ENSCANG00000041386	NOL10	68	43.719	Colobus_angolensis_palliatus
YGR145W	-	74	46.041	ENSCGRG00001009928	Nol10	77	46.041	Cricetulus_griseus_chok1gshd
YGR145W	-	74	46.041	ENSCGRG00000013251	Nol10	77	46.041	Cricetulus_griseus_crigri
YGR145W	-	72	43.654	ENSCSEG00000017227	nol10	76	42.726	Cynoglossus_semilaevis
YGR145W	-	72	47.238	ENSCVAG00000003369	nol10	75	45.833	Cyprinodon_variegatus
YGR145W	-	76	44.065	ENSDARG00000020077	nol10	89	40.441	Danio_rerio
YGR145W	-	74	42.569	ENSDNOG00000003577	NOL10	79	42.171	Dasypus_novemcinctus
YGR145W	-	68	47.495	ENSDORG00000001331	Nol10	77	46.756	Dipodomys_ordii
YGR145W	-	80	37.024	FBgn0261535	l(2)34Fd	69	39.096	Drosophila_melanogaster
YGR145W	-	71	40.156	ENSETEG00000009068	NOL10	76	40.156	Echinops_telfairi
YGR145W	-	88	39.596	ENSEBUG00000015283	nol10	87	38.794	Eptatretus_burgeri
YGR145W	-	97	39.777	ENSEASG00005004919	NOL10	95	40.909	Equus_asinus_asinus
YGR145W	-	93	41.176	ENSECAG00000015177	NOL10	95	40.909	Equus_caballus
YGR145W	-	68	42.857	ENSEEUG00000006076	NOL10	65	42.857	Erinaceus_europaeus
YGR145W	-	84	43.042	ENSELUG00000014763	nol10	78	45.115	Esox_lucius
YGR145W	-	74	46.382	ENSFCAG00000009255	NOL10	79	45.504	Felis_catus
YGR145W	-	68	47.305	ENSFALG00000006658	NOL10	76	46.578	Ficedula_albicollis
YGR145W	-	74	46.111	ENSFDAG00000021249	NOL10	75	46.084	Fukomys_damarensis
YGR145W	-	84	42.766	ENSFHEG00000008899	nol10	84	43.106	Fundulus_heteroclitus
YGR145W	-	74	45.656	ENSGMOG00000004291	nol10	79	45.161	Gadus_morhua
YGR145W	-	72	47.048	ENSGALG00000016445	NOL10	78	46.182	Gallus_gallus
YGR145W	-	75	45.471	ENSGAFG00000019507	nol10	77	44.245	Gambusia_affinis
YGR145W	-	75	45.173	ENSGACG00000013000	nol10	78	45.173	Gasterosteus_aculeatus
YGR145W	-	85	42.605	ENSGAGG00000013214	NOL10	78	45.719	Gopherus_agassizii
YGR145W	-	70	46.498	ENSGGOG00000034826	NOL10	94	40.944	Gorilla_gorilla
YGR145W	-	75	44.123	ENSHBUG00000014831	nol10	77	44.000	Haplochromis_burtoni
YGR145W	-	74	45.926	ENSHGLG00000001564	NOL10	78	45.902	Heterocephalus_glaber_female
YGR145W	-	74	45.926	ENSHGLG00100008143	NOL10	79	45.242	Heterocephalus_glaber_male
YGR145W	-	74	43.970	ENSHCOG00000011240	nol10	71	43.761	Hippocampus_comes
YGR145W	-	75	44.973	ENSIPUG00000008691	nol10	78	43.015	Ictalurus_punctatus
YGR145W	-	72	46.565	ENSSTOG00000005485	NOL10	78	45.620	Ictidomys_tridecemlineatus
YGR145W	-	74	41.220	ENSJJAG00000013166	Nol10	94	36.919	Jaculus_jaculus
YGR145W	-	72	41.333	ENSKMAG00000003400	nol10	73	45.200	Kryptolebias_marmoratus
YGR145W	-	84	42.626	ENSLBEG00000023587	nol10	73	43.972	Labrus_bergylta
YGR145W	-	86	42.296	ENSLACG00000004450	NOL10	88	42.453	Latimeria_chalumnae
YGR145W	-	74	45.826	ENSLOCG00000016660	nol10	86	43.590	Lepisosteus_oculatus
YGR145W	-	72	46.756	ENSLAFG00000010489	NOL10	78	45.620	Loxodonta_africana
YGR145W	-	74	46.382	ENSMFAG00000041289	NOL10	94	41.298	Macaca_fascicularis
YGR145W	-	74	46.568	ENSMMUG00000010671	NOL10	94	41.445	Macaca_mulatta
YGR145W	-	74	46.382	ENSMNEG00000039685	NOL10	94	41.298	Macaca_nemestrina
YGR145W	-	74	46.382	ENSMLEG00000011854	NOL10	94	41.298	Mandrillus_leucophaeus
YGR145W	-	84	42.434	ENSMAMG00000014932	nol10	85	41.460	Mastacembelus_armatus
YGR145W	-	75	44.123	ENSMZEG00005009662	nol10	75	44.123	Maylandia_zebra
YGR145W	-	72	46.768	ENSMGAG00000014012	NOL10	78	45.917	Meleagris_gallopavo
YGR145W	-	74	46.041	ENSMAUG00000010862	Nol10	77	46.041	Mesocricetus_auratus
YGR145W	-	74	46.011	ENSMICG00000004805	NOL10	84	43.021	Microcebus_murinus
YGR145W	-	74	45.856	ENSMOCG00000021564	Nol10	77	45.856	Microtus_ochrogaster
YGR145W	-	72	45.038	ENSMMOG00000004871	nol10	70	45.038	Mola_mola
YGR145W	-	72	46.756	ENSMODG00000014784	NOL10	79	44.964	Monodelphis_domestica
YGR145W	-	66	43.802	ENSMALG00000012150	nol10	72	43.611	Monopterus_albus
YGR145W	-	74	46.011	MGP_CAROLIEiJ_G0017636	Nol10	78	45.985	Mus_caroli
YGR145W	-	74	45.826	ENSMUSG00000061458	Nol10	78	45.803	Mus_musculus
YGR145W	-	74	42.222	MGP_PahariEiJ_G0029393	Nol10	77	42.077	Mus_pahari
YGR145W	-	74	46.011	MGP_SPRETEiJ_G0018478	Nol10	78	45.985	Mus_spretus
YGR145W	-	72	45.817	ENSMPUG00000013325	-	79	44.265	Mustela_putorius_furo
YGR145W	-	74	46.011	ENSMLUG00000012309	NOL10	79	45.504	Myotis_lucifugus
YGR145W	-	74	46.382	ENSNGAG00000015506	Nol10	79	45.504	Nannospalax_galili
YGR145W	-	75	44.000	ENSNBRG00000011660	nol10	77	44.000	Neolamprologus_brichardi
YGR145W	-	74	46.011	ENSNLEG00000013851	NOL10	94	41.003	Nomascus_leucogenys
YGR145W	-	56	44.483	ENSMEUG00000005659	-	62	42.857	Notamacropus_eugenii
YGR145W	-	72	46.756	ENSODEG00000000508	NOL10	79	45.144	Octodon_degus
YGR145W	-	75	44.404	ENSONIG00000019556	nol10	78	44.404	Oreochromis_niloticus
YGR145W	-	64	40.466	ENSOANG00000014497	-	73	42.963	Ornithorhynchus_anatinus
YGR145W	-	74	45.556	ENSOCUG00000016892	NOL10	95	40.087	Oryctolagus_cuniculus
YGR145W	-	82	42.000	ENSORLG00000017767	nol10	87	41.270	Oryzias_latipes
YGR145W	-	75	45.372	ENSORLG00020015571	nol10	90	41.311	Oryzias_latipes_hni
YGR145W	-	75	45.091	ENSORLG00015011988	nol10	82	42.240	Oryzias_latipes_hsok
YGR145W	-	74	44.301	ENSOMEG00000008584	nol10	78	42.857	Oryzias_melastigma
YGR145W	-	76	45.683	ENSOGAG00000010494	NOL10	77	46.168	Otolemur_garnettii
YGR145W	-	74	45.488	ENSOARG00000015507	NOL10	77	45.488	Ovis_aries
YGR145W	-	74	46.011	ENSPPAG00000010631	NOL10	95	40.762	Pan_paniscus
YGR145W	-	74	46.197	ENSPPRG00000017868	NOL10	79	45.324	Panthera_pardus
YGR145W	-	70	46.887	ENSPTIG00000012456	NOL10	75	45.951	Panthera_tigris_altaica
YGR145W	-	93	40.882	ENSPTRG00000011651	NOL10	99	40.882	Pan_troglodytes
YGR145W	-	93	41.324	ENSPANG00000006259	NOL10	94	41.298	Papio_anubis
YGR145W	-	84	42.553	ENSPKIG00000023459	nol10	98	38.336	Paramormyrops_kingsleyae
YGR145W	-	79	42.361	ENSPSIG00000015359	NOL10	76	46.748	Pelodiscus_sinensis
YGR145W	-	76	43.986	ENSPMGG00000006105	nol10	77	44.909	Periophthalmus_magnuspinnatus
YGR145W	-	74	46.011	ENSPEMG00000008676	Nol10	79	45.144	Peromyscus_maniculatus_bairdii
YGR145W	-	76	43.739	ENSPMAG00000002809	nol10	84	43.563	Petromyzon_marinus
YGR145W	-	72	47.137	ENSPCIG00000022730	NOL10	83	45.324	Phascolarctos_cinereus
YGR145W	-	76	45.586	ENSPFOG00000009689	nol10	75	45.586	Poecilia_formosa
YGR145W	-	76	45.225	ENSPLAG00000023264	nol10	77	45.355	Poecilia_latipinna
YGR145W	-	76	45.586	ENSPMEG00000022288	nol10	77	45.719	Poecilia_mexicana
YGR145W	-	76	45.405	ENSPREG00000004461	nol10	77	45.537	Poecilia_reticulata
YGR145W	-	74	46.324	ENSPPYG00000012653	NOL10	77	46.041	Pongo_abelii
YGR145W	-	54	39.286	ENSPCAG00000002635	NOL10	68	39.286	Procavia_capensis
YGR145W	-	74	36.466	ENSPCOG00000024792	NOL10	75	35.662	Propithecus_coquereli
YGR145W	-	74	44.278	ENSPVAG00000006339	NOL10	78	43.911	Pteropus_vampyrus
YGR145W	-	75	44.727	ENSPNYG00000020549	nol10	77	44.727	Pundamilia_nyererei
YGR145W	-	85	40.735	ENSPNAG00000001397	nol10	73	44.084	Pygocentrus_nattereri
YGR145W	-	74	46.197	ENSRNOG00000005344	Nol10	77	45.956	Rattus_norvegicus
YGR145W	-	72	46.374	ENSRBIG00000043507	NOL10	81	44.760	Rhinopithecus_bieti
YGR145W	-	74	46.197	ENSRROG00000043208	NOL10	94	41.150	Rhinopithecus_roxellana
YGR145W	-	74	37.453	ENSSBOG00000025651	NOL10	77	38.489	Saimiri_boliviensis_boliviensis
YGR145W	-	72	46.667	ENSSFOG00015003083	nol10	82	39.614	Scleropages_formosus
YGR145W	-	72	46.374	ENSSMAG00000014757	nol10	80	43.607	Scophthalmus_maximus
YGR145W	-	74	44.815	ENSSDUG00000019201	nol10	75	44.304	Seriola_dumerili
YGR145W	-	76	42.105	ENSSLDG00000015011	nol10	85	40.843	Seriola_lalandi_dorsalis
YGR145W	-	67	44.634	ENSSARG00000005947	NOL10	84	37.520	Sorex_araneus
YGR145W	-	85	42.114	ENSSPUG00000015811	NOL10	77	44.917	Sphenodon_punctatus
YGR145W	-	75	43.978	ENSSPAG00000019552	nol10	77	43.978	Stegastes_partitus
YGR145W	-	74	46.011	ENSSSCG00000008635	NOL10	84	42.810	Sus_scrofa
YGR145W	-	72	46.578	ENSTGUG00000013047	NOL10	78	45.735	Taeniopygia_guttata
YGR145W	-	75	38.000	ENSTRUG00000007365	nol10	76	38.000	Takifugu_rubripes
YGR145W	-	75	44.283	ENSTNIG00000005411	nol10	78	44.283	Tetraodon_nigroviridis
YGR145W	-	74	35.622	ENSTBEG00000000452	NOL10	88	35.072	Tupaia_belangeri
YGR145W	-	70	44.553	ENSTTRG00000013158	NOL10	78	43.691	Tursiops_truncatus
YGR145W	-	72	43.403	ENSUAMG00000012342	NOL10	95	37.662	Ursus_americanus
YGR145W	-	72	46.756	ENSUMAG00000003385	NOL10	76	45.144	Ursus_maritimus
YGR145W	-	74	46.197	ENSVVUG00000001394	NOL10	79	45.324	Vulpes_vulpes
YGR145W	-	72	42.750	ENSXETG00000003518	nol10	78	42.086	Xenopus_tropicalis
YGR145W	-	76	45.000	ENSXMAG00000018498	nol10	77	45.537	Xiphophorus_maculatus