EuRBPDB

Description

Ensembl ID: YGR162W (Gene tree)
Gene ID: -
Gene Symbol: TIF4631
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 2859
Position: chrVII:824059-826917
Accession: S000003394
RBP type: canonical RBP
Summary: Translation initiation factor eIF4G%3B subunit of the mRNA cap-binding protein complex (eIF4F) that also contains eIF4E (Cdc33p)%3B interacts with Pab1p and with eIF4A (Tif1p)%3B also has a role in biogenesis of the large ribosomal subunit%3B TIF4631 has a paralog%2C TIF4632%2C that arose from the whole genome duplication

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YGR162W_mRNA	eIF_4G1	PF12152.8	1.6e-25	1	1
YGR162W_mRNA	MIF4G	PF02854.19	2.1e-51	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468
20844764	Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiae	MS & yeast	2010 Sep 10	Tsvetanova NG	DOI: 10.1371/journal.pone.0012671

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YGR162W_mRNA	-	2859	-	YGR162W_mRNA	952 (aa)	-	P39935

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YGR162W	TIF4631	58	67.965	YGL049C	TIF4632	58	68.864