EuRBPDB

Description

Ensembl ID: YGR178C (Gene tree)
Gene ID: -
Gene Symbol: PBP1
Alias: MRS16
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 2169
Position: chrVII:851047-853215
Accession: S000003410
RBP type: canonical RBP
Summary: Component of glucose deprivation induced stress granules%3B involved in P-body-dependent granule assembly%3B similar to human ataxin-2%3B interacts with Pab1p to regulate mRNA polyadenylation%3B interacts with Mkt1p to regulate HO translation%3B protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YGR178C_mRNA	LsmAD	PF06741.13	1.3e-30	1	1
YGR178C_mRNA	SM-ATX	PF14438.6	3.3e-14	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468
20844764	Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiae	MS & yeast	2010 Sep 10	Tsvetanova NG	DOI: 10.1371/journal.pone.0012671

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YGR178C_mRNA	-	2169	-	YGR178C_mRNA	722 (aa)	-	P53297

Gene Model

Protein-Protein Interaction (PPI)