EuRBPDB

Description

Ensembl ID: YGR192C (Gene tree)
Gene ID: -
Gene Symbol: TDH3
Alias: GLD1|HSP35|HSP36|SSS2
Full Name: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)%2C isozyme 3%3B involved in glycolysis and gluconeogenesis%3B tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1%2C3 bis-phosphoglycerate%3B detected in the cytoplasm and cell wall%3B GAPDH-derived antimicrobial peptides secreted by S. cerevisiae are active against a wide variety of wine-related yeasts and bacteria%3B binds AU-rich RNA
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 999
Position: chrVII: 882812-883810
Accession: S000003424
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YGR192C_mRNA	-	999	-	YGR192C_mRNA	332 (aa)	-	P00359

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YGR192C	TDH3	98	67.267	WBGene00001683	gpd-1	98	67.267	Caenorhabditis_elegans
YGR192C	TDH3	98	65.766	WBGene00001684	gpd-2	98	65.766	Caenorhabditis_elegans
YGR192C	TDH3	98	66.667	WBGene00001686	gpd-4	98	66.667	Caenorhabditis_elegans
YGR192C	TDH3	99	65.046	ENSG00000111640	GAPDH	98	69.020	Homo_sapiens
YGR192C	TDH3	99	66.364	ENSMUSG00000057666	Gapdh	100	67.857	Mus_musculus
YGR192C	TDH3	100	96.386	YJR009C	TDH2	100	96.386	Saccharomyces_cerevisiae
YGR192C	TDH3	100	88.253	YJL052W	TDH1	100	88.253	Saccharomyces_cerevisiae