EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YGR195W (Gene tree)
Gene ID: -
Gene Symbol: SKI6
Alias: ECM20|RRP41
Full Name: Exosome non-catalytic core component%3B involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm%3B has similarity to E. coli RNase PH and to human hRrp41p (EXOSC4)
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 741 bases
Position: chrVII:888882-889622
Accession: S000003427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YGR195W_mRNA	RNase_PH	PF01138.21	4.1e-25	1	1
YGR195W_mRNA	RNase_PH_C	PF03725.15	4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YGR195W_mRNA	-	741	-	YGR195W_mRNA	246 (aa)	-	P46948

Gene Model

Click here to download YGR195W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YGR195W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YGR195W	SKI6	96	35.865	ENSG00000178896	EXOSC4	96	35.865	Homo_sapiens
YGR195W	SKI6	97	36.667	ENSAPOG00000000255	exosc4	97	36.667	Acanthochromis_polyacanthus
YGR195W	SKI6	96	35.865	ENSAMEG00000006093	EXOSC4	96	35.865	Ailuropoda_melanoleuca
YGR195W	SKI6	97	36.250	ENSACIG00000017924	exosc4	97	36.250	Amphilophus_citrinellus
YGR195W	SKI6	97	36.667	ENSAOCG00000005105	exosc4	97	36.667	Amphiprion_ocellaris
YGR195W	SKI6	97	36.667	ENSAPEG00000003972	exosc4	97	36.667	Amphiprion_percula
YGR195W	SKI6	97	36.250	ENSATEG00000007766	exosc4	97	36.250	Anabas_testudineus
YGR195W	SKI6	69	32.558	ENSACAG00000004017	EXOSC4	90	32.558	Anolis_carolinensis
YGR195W	SKI6	96	35.865	ENSANAG00000026123	EXOSC4	96	35.865	Aotus_nancymaae
YGR195W	SKI6	97	36.667	ENSACLG00000020071	exosc4	97	36.667	Astatotilapia_calliptera
YGR195W	SKI6	97	34.583	ENSAMXG00000030867	exosc4	97	34.583	Astyanax_mexicanus
YGR195W	SKI6	97	35.000	ENSBTAG00000014607	EXOSC4	97	35.000	Bos_taurus
YGR195W	SKI6	96	35.865	ENSCJAG00000021458	EXOSC4	96	35.865	Callithrix_jacchus
YGR195W	SKI6	96	35.443	ENSCAFG00000001521	EXOSC4	96	35.443	Canis_familiaris
YGR195W	SKI6	96	35.443	ENSCAFG00020018820	EXOSC4	96	35.443	Canis_lupus_dingo
YGR195W	SKI6	97	35.000	ENSCHIG00000021121	EXOSC4	97	35.000	Capra_hircus
YGR195W	SKI6	96	35.865	ENSTSYG00000029697	EXOSC4	96	35.865	Carlito_syrichta
YGR195W	SKI6	69	33.333	ENSCAPG00000017958	EXOSC4	78	33.333	Cavia_aperea
YGR195W	SKI6	96	36.287	ENSCPOG00000022671	EXOSC4	96	36.287	Cavia_porcellus
YGR195W	SKI6	68	33.929	ENSCCAG00000025515	EXOSC4	81	33.929	Cebus_capucinus
YGR195W	SKI6	96	35.865	ENSCATG00000029965	EXOSC4	96	35.865	Cercocebus_atys
YGR195W	SKI6	96	36.287	ENSCLAG00000014676	EXOSC4	96	36.287	Chinchilla_lanigera
YGR195W	SKI6	96	35.865	ENSCSAG00000008802	EXOSC4	96	35.865	Chlorocebus_sabaeus
YGR195W	SKI6	97	37.083	ENSCPBG00000018860	EXOSC4	97	37.083	Chrysemys_picta_bellii
YGR195W	SKI6	72	38.889	ENSCING00000009562	-	72	38.889	Ciona_intestinalis
YGR195W	SKI6	62	30.968	ENSCSAVG00000002563	-	55	30.968	Ciona_savignyi
YGR195W	SKI6	74	36.612	ENSCSAVG00000008006	-	73	36.612	Ciona_savignyi
YGR195W	SKI6	96	35.865	ENSCANG00000035733	EXOSC4	96	35.865	Colobus_angolensis_palliatus
YGR195W	SKI6	97	36.250	ENSCGRG00001020452	Exosc4	97	36.250	Cricetulus_griseus_chok1gshd
YGR195W	SKI6	97	36.250	ENSCGRG00000016505	Exosc4	97	36.250	Cricetulus_griseus_crigri
YGR195W	SKI6	97	35.833	ENSCSEG00000010906	exosc4	97	35.833	Cynoglossus_semilaevis
YGR195W	SKI6	97	35.417	ENSCVAG00000006625	exosc4	97	35.417	Cyprinodon_variegatus
YGR195W	SKI6	96	34.599	ENSDARG00000103432	exosc4	98	34.599	Danio_rerio
YGR195W	SKI6	96	36.287	ENSDNOG00000009800	EXOSC4	96	36.287	Dasypus_novemcinctus
YGR195W	SKI6	96	35.865	ENSDORG00000008461	Exosc4	96	35.865	Dipodomys_ordii
YGR195W	SKI6	95	32.340	FBgn0032487	Ski6	93	32.340	Drosophila_melanogaster
YGR195W	SKI6	87	34.722	ENSEBUG00000014277	exosc4	88	34.722	Eptatretus_burgeri
YGR195W	SKI6	96	35.865	ENSEASG00005010166	EXOSC4	96	35.865	Equus_asinus_asinus
YGR195W	SKI6	96	35.865	ENSECAG00000013658	EXOSC4	96	35.865	Equus_caballus
YGR195W	SKI6	97	35.000	ENSELUG00000021011	exosc4	97	35.000	Esox_lucius
YGR195W	SKI6	96	36.287	ENSFCAG00000034465	EXOSC4	96	36.287	Felis_catus
YGR195W	SKI6	96	36.287	ENSFDAG00000006708	EXOSC4	96	36.287	Fukomys_damarensis
YGR195W	SKI6	96	34.599	ENSFHEG00000013533	exosc4	96	34.599	Fundulus_heteroclitus
YGR195W	SKI6	97	36.402	ENSGMOG00000002113	exosc4	95	36.402	Gadus_morhua
YGR195W	SKI6	70	31.111	ENSGMOG00000008151	exosc6	62	31.111	Gadus_morhua
YGR195W	SKI6	97	35.417	ENSGAFG00000021407	exosc4	97	35.417	Gambusia_affinis
YGR195W	SKI6	97	35.833	ENSGACG00000017838	exosc4	94	35.833	Gasterosteus_aculeatus
YGR195W	SKI6	96	35.865	ENSGGOG00000044212	-	96	35.865	Gorilla_gorilla
YGR195W	SKI6	96	35.865	ENSGGOG00000040193	-	96	35.865	Gorilla_gorilla
YGR195W	SKI6	97	36.667	ENSHBUG00000006605	exosc4	97	36.667	Haplochromis_burtoni
YGR195W	SKI6	96	36.287	ENSHGLG00000016299	EXOSC4	96	36.287	Heterocephalus_glaber_female
YGR195W	SKI6	96	36.287	ENSHGLG00100018786	EXOSC4	96	36.287	Heterocephalus_glaber_male
YGR195W	SKI6	97	35.833	ENSHCOG00000018875	exosc4	93	35.833	Hippocampus_comes
YGR195W	SKI6	97	34.583	ENSIPUG00000011922	Exosc4	97	34.583	Ictalurus_punctatus
YGR195W	SKI6	96	35.000	ENSSTOG00000002632	EXOSC4	96	35.000	Ictidomys_tridecemlineatus
YGR195W	SKI6	96	36.287	ENSJJAG00000009655	Exosc4	96	36.287	Jaculus_jaculus
YGR195W	SKI6	97	35.417	ENSKMAG00000015373	exosc4	97	35.417	Kryptolebias_marmoratus
YGR195W	SKI6	97	36.250	ENSLBEG00000012754	exosc4	97	36.250	Labrus_bergylta
YGR195W	SKI6	52	36.923	ENSLACG00000009217	EXOSC4	99	36.923	Latimeria_chalumnae
YGR195W	SKI6	97	32.917	ENSLOCG00000008878	exosc4	97	32.917	Lepisosteus_oculatus
YGR195W	SKI6	96	35.865	ENSLAFG00000030187	EXOSC4	96	35.865	Loxodonta_africana
YGR195W	SKI6	96	35.865	ENSMFAG00000000161	EXOSC4	96	35.865	Macaca_fascicularis
YGR195W	SKI6	96	35.865	ENSMMUG00000007160	EXOSC4	96	35.865	Macaca_mulatta
YGR195W	SKI6	96	35.865	ENSMNEG00000033938	EXOSC4	96	35.865	Macaca_nemestrina
YGR195W	SKI6	96	35.865	ENSMLEG00000041197	EXOSC4	96	35.865	Mandrillus_leucophaeus
YGR195W	SKI6	97	36.250	ENSMAMG00000014749	exosc4	97	36.250	Mastacembelus_armatus
YGR195W	SKI6	74	30.159	ENSMAMG00000016983	exosc6	71	30.159	Mastacembelus_armatus
YGR195W	SKI6	97	36.667	ENSMZEG00005025086	exosc4	97	36.667	Maylandia_zebra
YGR195W	SKI6	97	36.250	ENSMAUG00000007911	Exosc4	97	36.250	Mesocricetus_auratus
YGR195W	SKI6	97	36.250	ENSMOCG00000020295	Exosc4	97	36.250	Microtus_ochrogaster
YGR195W	SKI6	97	35.000	ENSMMOG00000016779	exosc4	97	35.000	Mola_mola
YGR195W	SKI6	87	36.744	ENSMODG00000010435	EXOSC4	99	36.744	Monodelphis_domestica
YGR195W	SKI6	97	35.833	ENSMALG00000020564	exosc4	97	35.833	Monopterus_albus
YGR195W	SKI6	97	36.250	MGP_CAROLIEiJ_G0019919	Exosc4	97	36.250	Mus_caroli
YGR195W	SKI6	97	36.250	ENSMUSG00000034259	Exosc4	97	36.250	Mus_musculus
YGR195W	SKI6	97	36.250	MGP_PahariEiJ_G0019929	Exosc4	97	36.250	Mus_pahari
YGR195W	SKI6	97	36.250	MGP_SPRETEiJ_G0020822	Exosc4	97	36.250	Mus_spretus
YGR195W	SKI6	69	32.749	ENSMPUG00000007260	EXOSC4	85	32.749	Mustela_putorius_furo
YGR195W	SKI6	97	36.250	ENSNGAG00000022428	Exosc4	97	36.250	Nannospalax_galili
YGR195W	SKI6	97	36.667	ENSNBRG00000012326	exosc4	97	36.667	Neolamprologus_brichardi
YGR195W	SKI6	96	35.865	ENSNLEG00000010449	EXOSC4	96	35.865	Nomascus_leucogenys
YGR195W	SKI6	96	36.709	ENSMEUG00000011002	EXOSC4	96	36.709	Notamacropus_eugenii
YGR195W	SKI6	72	32.022	ENSOPRG00000016625	EXOSC4	95	32.022	Ochotona_princeps
YGR195W	SKI6	96	36.287	ENSODEG00000013951	EXOSC4	96	36.287	Octodon_degus
YGR195W	SKI6	97	36.250	ENSONIG00000009617	exosc4	97	36.250	Oreochromis_niloticus
YGR195W	SKI6	97	37.083	ENSOANG00000014904	EXOSC4	97	37.083	Ornithorhynchus_anatinus
YGR195W	SKI6	96	36.287	ENSOCUG00000021243	EXOSC4	96	36.287	Oryctolagus_cuniculus
YGR195W	SKI6	97	34.167	ENSORLG00000017295	exosc4	98	34.167	Oryzias_latipes
YGR195W	SKI6	97	34.167	ENSORLG00020009788	exosc4	98	34.167	Oryzias_latipes_hni
YGR195W	SKI6	97	34.167	ENSORLG00015009754	exosc4	98	34.167	Oryzias_latipes_hsok
YGR195W	SKI6	97	34.167	ENSOMEG00000005800	exosc4	98	34.167	Oryzias_melastigma
YGR195W	SKI6	96	35.865	ENSOGAG00000007411	EXOSC4	96	35.865	Otolemur_garnettii
YGR195W	SKI6	97	34.298	ENSOARG00000015188	EXOSC4	97	34.298	Ovis_aries
YGR195W	SKI6	96	35.865	ENSPPAG00000035746	EXOSC4	96	35.865	Pan_paniscus
YGR195W	SKI6	96	36.287	ENSPPRG00000019782	EXOSC4	96	36.287	Panthera_pardus
YGR195W	SKI6	68	34.524	ENSPTIG00000020006	EXOSC4	68	34.524	Panthera_tigris_altaica
YGR195W	SKI6	96	35.865	ENSPTRG00000020677	EXOSC4	96	35.865	Pan_troglodytes
YGR195W	SKI6	96	35.865	ENSPANG00000023276	EXOSC4	96	35.865	Papio_anubis
YGR195W	SKI6	97	33.333	ENSPKIG00000018362	exosc4	97	33.333	Paramormyrops_kingsleyae
YGR195W	SKI6	97	35.417	ENSPMGG00000019307	exosc4	97	35.417	Periophthalmus_magnuspinnatus
YGR195W	SKI6	70	30.168	ENSPMGG00000016974	exosc6	71	30.168	Periophthalmus_magnuspinnatus
YGR195W	SKI6	97	36.250	ENSPEMG00000017031	Exosc4	97	36.250	Peromyscus_maniculatus_bairdii
YGR195W	SKI6	98	36.475	ENSPMAG00000001175	exosc4	99	36.475	Petromyzon_marinus
YGR195W	SKI6	96	37.131	ENSPCIG00000009102	EXOSC4	96	37.131	Phascolarctos_cinereus
YGR195W	SKI6	97	35.417	ENSPFOG00000015214	exosc4	97	35.417	Poecilia_formosa
YGR195W	SKI6	97	35.417	ENSPLAG00000018751	exosc4	97	35.417	Poecilia_latipinna
YGR195W	SKI6	97	35.417	ENSPMEG00000023116	exosc4	97	35.417	Poecilia_mexicana
YGR195W	SKI6	97	35.000	ENSPREG00000009632	exosc4	97	35.000	Poecilia_reticulata
YGR195W	SKI6	93	35.652	ENSPPYG00000018959	EXOSC4	95	35.652	Pongo_abelii
YGR195W	SKI6	97	35.833	ENSPCAG00000014920	EXOSC4	97	35.833	Procavia_capensis
YGR195W	SKI6	96	35.443	ENSPCOG00000020992	EXOSC4	96	35.443	Propithecus_coquereli
YGR195W	SKI6	96	35.443	ENSPVAG00000007100	EXOSC4	96	35.443	Pteropus_vampyrus
YGR195W	SKI6	97	36.667	ENSPNYG00000014429	exosc4	97	36.667	Pundamilia_nyererei
YGR195W	SKI6	97	30.000	ENSPNAG00000013750	exosc4	97	30.000	Pygocentrus_nattereri
YGR195W	SKI6	97	36.250	ENSRNOG00000012348	Exosc4	97	36.250	Rattus_norvegicus
YGR195W	SKI6	96	35.865	ENSRBIG00000038476	EXOSC4	96	35.865	Rhinopithecus_bieti
YGR195W	SKI6	96	35.865	ENSRROG00000038556	EXOSC4	96	35.865	Rhinopithecus_roxellana
YGR195W	SKI6	96	36.709	ENSSHAG00000005397	EXOSC4	96	36.709	Sarcophilus_harrisii
YGR195W	SKI6	97	34.583	ENSSFOG00015004133	exosc4	97	34.583	Scleropages_formosus
YGR195W	SKI6	97	36.250	ENSSMAG00000020020	exosc4	97	36.250	Scophthalmus_maximus
YGR195W	SKI6	97	36.250	ENSSDUG00000018966	exosc4	97	36.250	Seriola_dumerili
YGR195W	SKI6	97	36.250	ENSSLDG00000008003	exosc4	97	36.250	Seriola_lalandi_dorsalis
YGR195W	SKI6	69	33.918	ENSSLDG00000006678	-	87	33.918	Seriola_lalandi_dorsalis
YGR195W	SKI6	69	35.088	ENSSPUG00000009644	EXOSC4	84	35.088	Sphenodon_punctatus
YGR195W	SKI6	97	36.250	ENSSPAG00000016707	exosc4	90	36.250	Stegastes_partitus
YGR195W	SKI6	97	36.250	ENSSSCG00000005925	EXOSC4	97	36.250	Sus_scrofa
YGR195W	SKI6	97	35.000	ENSTRUG00000025054	exosc4	97	35.000	Takifugu_rubripes
YGR195W	SKI6	97	34.583	ENSTNIG00000008519	exosc4	97	34.583	Tetraodon_nigroviridis
YGR195W	SKI6	68	33.929	ENSTBEG00000000727	EXOSC4	89	33.929	Tupaia_belangeri
YGR195W	SKI6	96	35.865	ENSUAMG00000020173	EXOSC4	96	35.865	Ursus_americanus
YGR195W	SKI6	54	34.586	ENSUMAG00000020831	EXOSC4	90	34.586	Ursus_maritimus
YGR195W	SKI6	96	35.443	ENSVVUG00000009675	EXOSC4	96	35.443	Vulpes_vulpes
YGR195W	SKI6	72	32.584	ENSXETG00000004668	exosc4	92	32.584	Xenopus_tropicalis
YGR195W	SKI6	97	35.000	ENSXCOG00000015017	exosc4	97	35.000	Xiphophorus_couchianus
YGR195W	SKI6	97	35.000	ENSXMAG00000016287	exosc4	97	35.000	Xiphophorus_maculatus