EuRBPDB

Description

Ensembl ID: YHL034C (Gene tree)
Gene ID: -
Gene Symbol: SBP1
Alias: SSB1|SSBR1
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 885
Position: chrVIII:33193-34077
Accession: S000001026
RBP type: canonical RBP
Summary: Protein that binds eIF4G and has a role in repression of translation%3B has an RGG motif%3B found in cytoplasmic P bodies%3B binds to mRNAs under glucose starvation stress%2C most often in the 5' UTR%3B found associated with small nucleolar RNAs snR10 and snR11%3B SBP1 has a paralog%2C RNP1%2C that arose from the whole genome duplication

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YHL034C_mRNA	RRM_1	PF00076.22	1.1e-20	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl.PAR_CL & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468
20844764	Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiae	MS & yeast	2010 Sep 10	Tsvetanova NG	DOI: 10.1371/journal.pone.0012671

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YHL034C_mRNA	-	885	-	YHL034C_mRNA	294 (aa)	-	P10080

Gene Model

Protein-Protein Interaction (PPI)