EuRBPDB

Description

Ensembl ID: YHR021C (Gene tree)
Gene ID: -
Gene Symbol: RPS27B
Alias: -
Full Name: Protein component of the small (40S) ribosomal subunit%3B homologous to mammalian ribosomal protein S27%2C no bacterial homolog%3B RPS27B has a paralog%2C RPS27A%2C that arose from the whole genome duplication
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 799 bases
Position: chrVIII:147871-148669
Accession: S000001063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YHR021C_mRNA	Ribosomal_S27e	PF01667.17	1.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YHR021C_mRNA	-	249	-	YHR021C_mRNA	82 (aa)	-	P38711

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YHR021C	RPS27B	100	98.780	YKL156W	RPS27A	100	98.780

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YHR021C	RPS27B	100	65.854	WBGene00004496	rps-27	99	65.854	Caenorhabditis_elegans
YHR021C	RPS27B	100	70.732	FBgn0039300	RpS27	98	70.732	Drosophila_melanogaster
YHR021C	RPS27B	93	59.211	ENSFHEG00000004295	-	55	59.211	Fundulus_heteroclitus
YHR021C	RPS27B	100	57.317	ENSGAFG00000016054	-	59	57.317	Gambusia_affinis
YHR021C	RPS27B	95	60.256	ENSGACG00000011286	-	92	60.256	Gasterosteus_aculeatus
YHR021C	RPS27B	99	60.494	ENSMMOG00000020318	-	98	60.494	Mola_mola
YHR021C	RPS27B	95	58.974	ENSPFOG00000004190	-	98	58.974	Poecilia_formosa
YHR021C	RPS27B	100	58.537	ENSPLAG00000023590	-	98	58.537	Poecilia_latipinna
YHR021C	RPS27B	100	58.537	ENSPLAG00000013332	-	98	58.537	Poecilia_latipinna
YHR021C	RPS27B	98	57.500	ENSPMEG00000017808	-	83	59.211	Poecilia_mexicana
YHR021C	RPS27B	94	71.429	ENSSLDG00000003982	-	88	71.429	Seriola_lalandi_dorsalis
YHR021C	RPS27B	100	57.317	ENSXCOG00000010263	-	98	58.025	Xiphophorus_couchianus
YHR021C	RPS27B	93	59.211	ENSXMAG00000003387	-	88	59.211	Xiphophorus_maculatus