EuRBPDB

Description

Ensembl ID: YHR027C (Gene tree)
Gene ID: -
Gene Symbol: RPN1
Alias: HRD2|NAS1
Full Name: Non-ATPase base subunit of the 19S RP of the 26S proteasome%3B may participate in the recognition of several ligands of the proteasome%3B contains a leucine-rich repeat (LRR) domain%2C a site for protein-protein interactions%3B RP is the acronym for regulatory particle
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 2982
Position: chrVIII: 161730-164711
Accession: S000001069
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
20844764	Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiae	MS & yeast	2010 Sep 10	Tsvetanova NG	DOI: 10.1371/journal.pone.0012671

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YHR027C_mRNA	-	2982	-	YHR027C_mRNA	993 (aa)	-	P38764

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YHR027C	RPN1	85	51.575	FBgn0028695	Rpn1	95	40.580	Drosophila_melanogaster
YHR027C	RPN1	87	55.118	ENSG00000175166	PSMD2	83	58.947	Homo_sapiens