EuRBPDB

Description

Ensembl ID: YHR086W (Gene tree)
Gene ID: -
Gene Symbol: NAM8
Alias: MRE2|MUD15
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1572
Position: chrVIII:278153-279724
Accession: S000001128
RBP type: canonical RBP
Summary: RNA binding protein%2C component of the U1 snRNP protein%3B mutants are defective in meiotic recombination and in formation of viable spores%2C involved in the formation of DSBs through meiosis-specific splicing of REC107 pre-mRNA%3B Nam8p regulon embraces the meiotic pre-mRNAs of REC107%2C HFM1%2C AMA1 SPO22 and PCH2%3B the putative RNA binding domains RRM2 and RRM3 are required for Nam8p meiotic function

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YHR086W_mRNA	RRM_1	PF00076.22	1.9e-43	1	2
YHR086W_mRNA	RRM_1	PF00076.22	1.9e-43	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468
21124907	A screen for RNA binding proteins in yeast indicates dual functions for many enzymes	ProtoArray & yeast	2010 Nov 11	DOI: 10.1371/journal.pone.0015499

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YHR086W_mRNA	-	1572	-	YHR086W_mRNA	523 (aa)	-	Q00539

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YHR086W	NAM8	67	30.282	YBR212W	NGR1	63	31.148