EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YHR148W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Component of the SSU processome%3B SSU processome is required for pre-18S rRNA processing%2C essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 552 bases
Position: chrVIII:393534-394085
Accession: S000001191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YHR148W_mRNA	S4	PF01479.25	9.2e-13	1	1
YHR148W_mRNA	Ribosomal_S4	PF00163.19	5.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YHR148W_mRNA	-	552	-	YHR148W_mRNA	183 (aa)	-	P32899

Gene Model

Click here to download YHR148W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YHR148W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YHR148W	-	99	53.297	ENSAPOG00000014720	imp3	99	53.297	Acanthochromis_polyacanthus
YHR148W	-	99	54.098	ENSAMEG00000019247	IMP3	99	54.098	Ailuropoda_melanoleuca
YHR148W	-	98	54.444	ENSACIG00000022070	imp3	96	54.444	Amphilophus_citrinellus
YHR148W	-	99	53.846	ENSAOCG00000015761	imp3	99	53.846	Amphiprion_ocellaris
YHR148W	-	99	53.297	ENSAPEG00000005250	imp3	99	53.297	Amphiprion_percula
YHR148W	-	99	56.044	ENSATEG00000020021	imp3	99	56.044	Anabas_testudineus
YHR148W	-	100	47.594	ENSACAG00000016259	IMP3	99	47.594	Anolis_carolinensis
YHR148W	-	99	46.995	ENSANAG00000036874	-	99	46.995	Aotus_nancymaae
YHR148W	-	99	53.552	ENSANAG00000016669	-	99	53.552	Aotus_nancymaae
YHR148W	-	99	54.945	ENSACLG00000009929	imp3	99	54.945	Astatotilapia_calliptera
YHR148W	-	97	51.977	ENSAMXG00000018715	imp3	100	51.977	Astyanax_mexicanus
YHR148W	-	99	44.505	WBGene00016740	C48B6.2	99	44.505	Caenorhabditis_elegans
YHR148W	-	99	53.552	ENSCJAG00000044585	IMP3	99	53.552	Callithrix_jacchus
YHR148W	-	99	53.552	ENSCAFG00000018039	IMP3	81	53.552	Canis_familiaris
YHR148W	-	99	42.077	ENSCAFG00020006737	-	99	44.565	Canis_lupus_dingo
YHR148W	-	99	53.552	ENSCAFG00020003760	-	99	53.552	Canis_lupus_dingo
YHR148W	-	99	54.098	ENSCHIG00000006295	IMP3	99	54.098	Capra_hircus
YHR148W	-	99	54.098	ENSTSYG00000005503	IMP3	99	54.098	Carlito_syrichta
YHR148W	-	99	54.098	ENSCPOG00000012016	IMP3	99	54.098	Cavia_porcellus
YHR148W	-	99	47.514	ENSCCAG00000023378	-	97	47.674	Cebus_capucinus
YHR148W	-	99	53.552	ENSCCAG00000002712	-	99	53.552	Cebus_capucinus
YHR148W	-	99	53.552	ENSCATG00000015188	IMP3	99	53.552	Cercocebus_atys
YHR148W	-	99	53.552	ENSCSAG00000019732	IMP3	99	53.552	Chlorocebus_sabaeus
YHR148W	-	99	53.552	ENSCHOG00000012046	IMP3	99	53.552	Choloepus_hoffmanni
YHR148W	-	100	46.486	ENSCPBG00000021662	IMP3	99	46.486	Chrysemys_picta_bellii
YHR148W	-	99	51.934	ENSCING00000004233	-	99	51.934	Ciona_intestinalis
YHR148W	-	99	51.381	ENSCSAVG00000000698	-	99	51.381	Ciona_savignyi
YHR148W	-	99	53.552	ENSCANG00000018342	IMP3	99	53.552	Colobus_angolensis_palliatus
YHR148W	-	99	53.005	ENSCGRG00001001326	Imp3	99	53.005	Cricetulus_griseus_chok1gshd
YHR148W	-	99	53.005	ENSCGRG00000018907	Imp3	99	53.005	Cricetulus_griseus_crigri
YHR148W	-	99	54.396	ENSCSEG00000017200	imp3	99	54.396	Cynoglossus_semilaevis
YHR148W	-	99	49.735	ENSCVAG00000019511	imp3	99	49.735	Cyprinodon_variegatus
YHR148W	-	99	56.044	ENSDARG00000115266	imp3	99	57.738	Danio_rerio
YHR148W	-	99	54.645	ENSDNOG00000015787	IMP3	80	54.645	Dasypus_novemcinctus
YHR148W	-	99	53.552	ENSDORG00000029301	Imp3	99	53.552	Dipodomys_ordii
YHR148W	-	98	53.333	FBgn0034232	CG4866	99	53.333	Drosophila_melanogaster
YHR148W	-	99	53.552	ENSETEG00000004278	IMP3	99	53.552	Echinops_telfairi
YHR148W	-	100	51.913	ENSEBUG00000002343	imp3	100	51.913	Eptatretus_burgeri
YHR148W	-	99	53.552	ENSEASG00005015693	IMP3	99	53.552	Equus_asinus_asinus
YHR148W	-	99	54.098	ENSECAG00000015786	IMP3	99	54.098	Equus_caballus
YHR148W	-	99	54.945	ENSELUG00000023264	imp3	99	54.945	Esox_lucius
YHR148W	-	99	54.098	ENSFCAG00000040328	IMP3	99	54.098	Felis_catus
YHR148W	-	71	41.985	ENSFALG00000014811	IMP3	98	41.985	Ficedula_albicollis
YHR148W	-	99	53.552	ENSFDAG00000018422	IMP3	99	53.552	Fukomys_damarensis
YHR148W	-	99	56.593	ENSFHEG00000016954	imp3	99	56.593	Fundulus_heteroclitus
YHR148W	-	99	53.846	ENSGMOG00000018162	imp3	99	53.846	Gadus_morhua
YHR148W	-	100	42.162	ENSGALG00000040238	IMP3	99	42.162	Gallus_gallus
YHR148W	-	99	54.945	ENSGAFG00000007425	imp3	99	54.945	Gambusia_affinis
YHR148W	-	99	55.495	ENSGACG00000015998	imp3	99	55.495	Gasterosteus_aculeatus
YHR148W	-	100	47.568	ENSGAGG00000008163	IMP3	99	47.568	Gopherus_agassizii
YHR148W	-	99	53.552	ENSGGOG00000025122	IMP3	99	53.552	Gorilla_gorilla
YHR148W	-	99	54.945	ENSHBUG00000018453	imp3	99	54.945	Haplochromis_burtoni
YHR148W	-	99	53.005	ENSHGLG00000019824	IMP3	99	53.005	Heterocephalus_glaber_female
YHR148W	-	99	53.005	ENSHGLG00100020660	IMP3	99	53.005	Heterocephalus_glaber_male
YHR148W	-	99	54.945	ENSHCOG00000020565	imp3	99	54.945	Hippocampus_comes
YHR148W	-	99	53.297	ENSIPUG00000013142	imp3	99	53.297	Ictalurus_punctatus
YHR148W	-	99	54.098	ENSSTOG00000030143	IMP3	99	54.098	Ictidomys_tridecemlineatus
YHR148W	-	99	53.297	ENSKMAG00000001956	imp3	99	53.297	Kryptolebias_marmoratus
YHR148W	-	99	54.396	ENSLBEG00000008178	imp3	99	54.396	Labrus_bergylta
YHR148W	-	100	53.005	ENSLACG00000022148	imp3	99	53.005	Latimeria_chalumnae
YHR148W	-	99	52.198	ENSLOCG00000010237	imp3	99	52.198	Lepisosteus_oculatus
YHR148W	-	99	53.552	ENSLAFG00000004425	IMP3	99	53.552	Loxodonta_africana
YHR148W	-	99	53.552	ENSMFAG00000008867	IMP3	99	53.552	Macaca_fascicularis
YHR148W	-	99	53.552	ENSMMUG00000016103	IMP3	99	53.552	Macaca_mulatta
YHR148W	-	99	53.552	ENSMNEG00000026328	IMP3	99	53.552	Macaca_nemestrina
YHR148W	-	99	56.044	ENSMAMG00000003215	imp3	99	56.044	Mastacembelus_armatus
YHR148W	-	99	54.945	ENSMZEG00005005544	imp3	99	54.945	Maylandia_zebra
YHR148W	-	99	53.552	ENSMAUG00000010279	Imp3	99	53.552	Mesocricetus_auratus
YHR148W	-	99	54.645	ENSMICG00000044149	IMP3	99	54.645	Microcebus_murinus
YHR148W	-	99	53.552	ENSMOCG00000008647	Imp3	99	53.552	Microtus_ochrogaster
YHR148W	-	98	54.749	ENSMMOG00000018117	imp3	85	54.749	Mola_mola
YHR148W	-	99	55.191	ENSMODG00000025193	IMP3	99	55.191	Monodelphis_domestica
YHR148W	-	99	54.945	ENSMALG00000006505	imp3	99	54.945	Monopterus_albus
YHR148W	-	99	53.005	MGP_CAROLIEiJ_G0032258	Imp3	99	53.005	Mus_caroli
YHR148W	-	99	53.552	ENSMUSG00000032288	Imp3	99	53.552	Mus_musculus
YHR148W	-	99	53.005	MGP_PahariEiJ_G0015125	Imp3	99	53.005	Mus_pahari
YHR148W	-	99	53.552	MGP_SPRETEiJ_G0033398	Imp3	99	53.552	Mus_spretus
YHR148W	-	99	53.552	ENSMPUG00000020147	IMP3	99	53.552	Mustela_putorius_furo
YHR148W	-	99	54.645	ENSMLUG00000014032	IMP3	99	54.645	Myotis_lucifugus
YHR148W	-	99	53.005	ENSNGAG00000017248	Imp3	99	53.005	Nannospalax_galili
YHR148W	-	99	54.945	ENSNBRG00000004060	imp3	99	54.945	Neolamprologus_brichardi
YHR148W	-	99	54.098	ENSOPRG00000015906	-	99	54.098	Ochotona_princeps
YHR148W	-	99	54.098	ENSODEG00000020194	IMP3	99	54.098	Octodon_degus
YHR148W	-	99	54.396	ENSONIG00000010661	imp3	99	54.396	Oreochromis_niloticus
YHR148W	-	99	54.098	ENSOCUG00000004690	IMP3	99	54.098	Oryctolagus_cuniculus
YHR148W	-	100	53.005	ENSORLG00000004484	imp3	99	53.005	Oryzias_latipes
YHR148W	-	100	53.005	ENSORLG00020003771	imp3	99	53.005	Oryzias_latipes_hni
YHR148W	-	100	52.459	ENSORLG00015006933	imp3	99	52.459	Oryzias_latipes_hsok
YHR148W	-	100	53.005	ENSOMEG00000016160	imp3	99	53.005	Oryzias_melastigma
YHR148W	-	99	54.098	ENSOGAG00000004917	IMP3	99	54.098	Otolemur_garnettii
YHR148W	-	99	53.552	ENSPPAG00000009241	IMP3	99	53.552	Pan_paniscus
YHR148W	-	99	54.098	ENSPPRG00000018701	IMP3	99	54.098	Panthera_pardus
YHR148W	-	99	53.552	ENSPTRG00000052235	IMP3	99	53.552	Pan_troglodytes
YHR148W	-	99	53.552	ENSPANG00000013668	IMP3	99	53.552	Papio_anubis
YHR148W	-	99	56.044	ENSPKIG00000007169	imp3	99	56.044	Paramormyrops_kingsleyae
YHR148W	-	99	50.270	ENSPMGG00000009379	imp3	99	50.270	Periophthalmus_magnuspinnatus
YHR148W	-	99	53.005	ENSPEMG00000013003	Imp3	99	53.005	Peromyscus_maniculatus_bairdii
YHR148W	-	99	54.945	ENSPFOG00000016529	imp3	99	54.945	Poecilia_formosa
YHR148W	-	99	54.945	ENSPLAG00000013831	imp3	99	54.945	Poecilia_latipinna
YHR148W	-	99	54.945	ENSPMEG00000000797	imp3	99	54.945	Poecilia_mexicana
YHR148W	-	99	54.396	ENSPREG00000006885	imp3	99	54.396	Poecilia_reticulata
YHR148W	-	99	53.552	ENSPPYG00000006664	IMP3	99	53.552	Pongo_abelii
YHR148W	-	99	53.552	ENSPCAG00000006920	IMP3	99	53.552	Procavia_capensis
YHR148W	-	99	54.645	ENSPCOG00000012367	IMP3	99	54.645	Propithecus_coquereli
YHR148W	-	99	53.552	ENSPVAG00000010036	IMP3	99	53.552	Pteropus_vampyrus
YHR148W	-	99	54.945	ENSPNYG00000000324	imp3	99	54.945	Pundamilia_nyererei
YHR148W	-	99	53.846	ENSPNAG00000017113	imp3	99	53.846	Pygocentrus_nattereri
YHR148W	-	99	53.005	ENSRNOG00000017460	Imp3	99	53.005	Rattus_norvegicus
YHR148W	-	99	53.552	ENSRBIG00000024522	IMP3	99	53.552	Rhinopithecus_bieti
YHR148W	-	99	53.552	ENSRROG00000024157	IMP3	99	53.552	Rhinopithecus_roxellana
YHR148W	-	99	53.552	ENSSBOG00000006542	-	99	53.552	Saimiri_boliviensis_boliviensis
YHR148W	-	98	48.619	ENSSBOG00000026404	-	98	48.619	Saimiri_boliviensis_boliviensis
YHR148W	-	99	54.645	ENSSHAG00000006200	IMP3	99	54.645	Sarcophilus_harrisii
YHR148W	-	99	53.297	ENSSFOG00015012483	imp3	99	53.297	Scleropages_formosus
YHR148W	-	99	54.945	ENSSMAG00000007865	imp3	99	54.945	Scophthalmus_maximus
YHR148W	-	99	55.495	ENSSDUG00000010594	imp3	99	55.495	Seriola_dumerili
YHR148W	-	99	54.945	ENSSLDG00000015587	imp3	99	54.945	Seriola_lalandi_dorsalis
YHR148W	-	99	54.098	ENSSARG00000009657	IMP3	99	54.098	Sorex_araneus
YHR148W	-	99	53.846	ENSSPAG00000002088	imp3	99	53.846	Stegastes_partitus
YHR148W	-	100	41.622	ENSTGUG00000013228	IMP3	99	41.622	Taeniopygia_guttata
YHR148W	-	99	55.495	ENSTRUG00000025783	imp3	99	55.495	Takifugu_rubripes
YHR148W	-	99	54.098	ENSUAMG00000022724	IMP3	99	54.098	Ursus_americanus
YHR148W	-	99	54.098	ENSUMAG00000003736	IMP3	99	54.098	Ursus_maritimus
YHR148W	-	99	53.552	ENSVVUG00000019589	IMP3	99	53.552	Vulpes_vulpes
YHR148W	-	97	53.672	ENSXCOG00000007392	imp3	96	53.672	Xiphophorus_couchianus
YHR148W	-	99	54.945	ENSXMAG00000023049	imp3	99	54.945	Xiphophorus_maculatus