EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YHR189W (Gene tree)
Gene ID: -
Gene Symbol: PTH1
Alias: -
Full Name: One of two mitochondrially-localized peptidyl-tRNA hydrolases%3B dispensable for respiratory growth on rich medium%2C but required for respiratory growth on minimal medium%3B see also PTH2
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 573 bases
Position: chrVIII:484028-484600
Accession: S000001232
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YHR189W_mRNA	Pept_tRNA_hydro	PF01195.19	2.3e-34	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
21124907	A screen for RNA binding proteins in yeast indicates dual functions for many enzymes	ProtoArray & yeast	2010 Nov 11	DOI: 10.1371/journal.pone.0015499

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YHR189W_mRNA	-	573	-	YHR189W_mRNA	190 (aa)	-	P38876

Gene Model

Click here to download YHR189W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YHR189W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YHR189W	PTH1	65	31.200	ENSG00000187024	PTRH1	70	31.200	Homo_sapiens
YHR189W	PTH1	90	33.333	ENSAPOG00000003014	-	57	33.333	Acanthochromis_polyacanthus
YHR189W	PTH1	90	33.333	ENSAPOG00000000947	PTRH1	57	33.333	Acanthochromis_polyacanthus
YHR189W	PTH1	90	33.333	ENSAPOG00000010719	ptrh1	57	33.333	Acanthochromis_polyacanthus
YHR189W	PTH1	88	30.357	ENSAMEG00000016791	PTRH1	75	30.357	Ailuropoda_melanoleuca
YHR189W	PTH1	90	36.571	ENSACIG00000006734	ptrh1	71	36.571	Amphilophus_citrinellus
YHR189W	PTH1	88	32.143	ENSAOCG00000009725	ptrh1	57	32.143	Amphiprion_ocellaris
YHR189W	PTH1	88	32.143	ENSAPEG00000020993	ptrh1	57	32.143	Amphiprion_percula
YHR189W	PTH1	97	33.333	ENSATEG00000010003	ptrh1	64	33.333	Anabas_testudineus
YHR189W	PTH1	88	31.953	ENSANAG00000025547	PTRH1	74	31.953	Aotus_nancymaae
YHR189W	PTH1	91	35.227	ENSACLG00000025462	ptrh1	71	34.392	Astatotilapia_calliptera
YHR189W	PTH1	94	30.645	ENSAMXG00000034117	ptrh1	68	30.645	Astyanax_mexicanus
YHR189W	PTH1	88	30.769	ENSCAFG00000020123	PTRH1	74	30.769	Canis_familiaris
YHR189W	PTH1	88	30.769	ENSCAFG00020015776	PTRH1	72	30.769	Canis_lupus_dingo
YHR189W	PTH1	88	32.164	ENSCHIG00000008188	PTRH1	74	32.164	Capra_hircus
YHR189W	PTH1	60	33.333	ENSCAPG00000015926	PTRH1	76	33.333	Cavia_aperea
YHR189W	PTH1	91	32.759	ENSCPOG00000023968	PTRH1	76	32.759	Cavia_porcellus
YHR189W	PTH1	88	30.994	ENSCCAG00000023134	PTRH1	74	30.994	Cebus_capucinus
YHR189W	PTH1	88	31.609	ENSCLAG00000011155	PTRH1	74	31.609	Chinchilla_lanigera
YHR189W	PTH1	91	30.508	ENSCGRG00001013108	Ptrh1	81	30.508	Cricetulus_griseus_chok1gshd
YHR189W	PTH1	95	30.055	ENSCGRG00000016553	Ptrh1	94	30.055	Cricetulus_griseus_crigri
YHR189W	PTH1	91	32.955	ENSCSEG00000010332	ptrh1	61	32.955	Cynoglossus_semilaevis
YHR189W	PTH1	54	30.769	ENSCVAG00000003873	-	74	30.769	Cyprinodon_variegatus
YHR189W	PTH1	92	34.637	ENSCVAG00000010701	ptrh1	67	33.854	Cyprinodon_variegatus
YHR189W	PTH1	98	33.862	ENSDARG00000098206	ptrh1	77	33.862	Danio_rerio
YHR189W	PTH1	88	31.765	ENSDNOG00000024194	PTRH1	74	31.765	Dasypus_novemcinctus
YHR189W	PTH1	88	31.579	ENSDORG00000013321	Ptrh1	74	31.579	Dipodomys_ordii
YHR189W	PTH1	93	31.285	ENSEASG00005020466	PTRH1	78	31.285	Equus_asinus_asinus
YHR189W	PTH1	94	32.967	ENSECAG00000007615	PTRH1	62	32.967	Equus_caballus
YHR189W	PTH1	88	35.503	ENSELUG00000015467	ptrh1	59	35.503	Esox_lucius
YHR189W	PTH1	85	33.742	ENSFCAG00000001483	PTRH1	77	34.286	Felis_catus
YHR189W	PTH1	99	32.461	ENSFHEG00000010590	ptrh1	69	32.812	Fundulus_heteroclitus
YHR189W	PTH1	97	32.804	ENSGAFG00000016215	ptrh1	69	32.948	Gambusia_affinis
YHR189W	PTH1	93	34.637	ENSGACG00000014682	ptrh1	88	35.676	Gasterosteus_aculeatus
YHR189W	PTH1	93	31.461	ENSGAGG00000022860	PTRH1	75	31.461	Gopherus_agassizii
YHR189W	PTH1	88	30.769	ENSGGOG00000011033	PTRH1	74	30.769	Gorilla_gorilla
YHR189W	PTH1	91	34.857	ENSHBUG00000020824	ptrh1	64	34.043	Haplochromis_burtoni
YHR189W	PTH1	97	32.086	ENSHGLG00000019147	PTRH1	85	32.086	Heterocephalus_glaber_female
YHR189W	PTH1	97	33.155	ENSHGLG00100003681	PTRH1	88	33.155	Heterocephalus_glaber_male
YHR189W	PTH1	90	35.673	ENSHCOG00000014772	ptrh1	61	35.673	Hippocampus_comes
YHR189W	PTH1	92	30.460	ENSIPUG00000015364	ptrh1	64	30.460	Ictalurus_punctatus
YHR189W	PTH1	88	31.361	ENSSTOG00000008942	PTRH1	74	31.361	Ictidomys_tridecemlineatus
YHR189W	PTH1	88	32.164	ENSJJAG00000014338	Ptrh1	77	32.164	Jaculus_jaculus
YHR189W	PTH1	92	35.556	ENSKMAG00000003253	ptrh1	64	34.054	Kryptolebias_marmoratus
YHR189W	PTH1	64	33.607	ENSLBEG00000028842	ptrh1	70	33.607	Labrus_bergylta
YHR189W	PTH1	87	31.765	ENSLACG00000016741	PTRH1	67	31.765	Latimeria_chalumnae
YHR189W	PTH1	88	32.941	ENSMAMG00000017386	ptrh1	66	32.105	Mastacembelus_armatus
YHR189W	PTH1	91	35.795	ENSMZEG00005020001	ptrh1	71	34.921	Maylandia_zebra
YHR189W	PTH1	93	30.769	ENSMAUG00000006266	Ptrh1	83	30.769	Mesocricetus_auratus
YHR189W	PTH1	88	30.588	ENSMICG00000005611	PTRH1	74	30.588	Microcebus_murinus
YHR189W	PTH1	91	35.795	ENSMMOG00000014747	ptrh1	63	34.921	Mola_mola
YHR189W	PTH1	53	33.663	ENSMALG00000005392	ptrh1	55	33.663	Monopterus_albus
YHR189W	PTH1	97	30.270	ENSMUSG00000053746	Ptrh1	85	30.270	Mus_musculus
YHR189W	PTH1	93	32.584	ENSMPUG00000013790	PTRH1	78	32.584	Mustela_putorius_furo
YHR189W	PTH1	92	30.108	ENSMLUG00000013454	PTRH1	80	31.217	Myotis_lucifugus
YHR189W	PTH1	91	34.857	ENSNBRG00000015590	ptrh1	64	34.043	Neolamprologus_brichardi
YHR189W	PTH1	88	33.136	ENSODEG00000004012	PTRH1	75	33.136	Octodon_degus
YHR189W	PTH1	91	33.714	ENSONIG00000013912	ptrh1	69	32.979	Oreochromis_niloticus
YHR189W	PTH1	88	30.588	ENSOCUG00000006894	PTRH1	69	30.588	Oryctolagus_cuniculus
YHR189W	PTH1	88	31.844	ENSOARG00000011808	PTRH1	75	31.844	Ovis_aries
YHR189W	PTH1	85	34.356	ENSPPRG00000007889	PTRH1	77	34.857	Panthera_pardus
YHR189W	PTH1	97	32.086	ENSPKIG00000005449	ptrh1	58	32.086	Paramormyrops_kingsleyae
YHR189W	PTH1	91	34.054	ENSPMGG00000002148	ptrh1	60	33.523	Periophthalmus_magnuspinnatus
YHR189W	PTH1	97	33.333	ENSPFOG00000003715	ptrh1	67	33.333	Poecilia_formosa
YHR189W	PTH1	95	32.609	ENSPLAG00000023354	ptrh1	70	32.609	Poecilia_latipinna
YHR189W	PTH1	97	33.333	ENSPMEG00000000447	ptrh1	67	33.333	Poecilia_mexicana
YHR189W	PTH1	97	32.275	ENSPREG00000012612	ptrh1	67	32.275	Poecilia_reticulata
YHR189W	PTH1	88	31.176	ENSPCAG00000007016	PTRH1	74	31.176	Procavia_capensis
YHR189W	PTH1	88	30.994	ENSPCOG00000014541	PTRH1	74	30.994	Propithecus_coquereli
YHR189W	PTH1	88	30.994	ENSPVAG00000000954	PTRH1	74	30.994	Pteropus_vampyrus
YHR189W	PTH1	91	34.286	ENSPNYG00000007789	ptrh1	64	33.511	Pundamilia_nyererei
YHR189W	PTH1	96	32.609	ENSPNAG00000029930	ptrh1	66	32.609	Pygocentrus_nattereri
YHR189W	PTH1	97	30.645	ENSRNOG00000049034	Ptrh1	85	30.645	Rattus_norvegicus
YHR189W	PTH1	100	32.124	ENSSFOG00015007053	ptrh1	84	33.880	Scleropages_formosus
YHR189W	PTH1	89	32.948	ENSSMAG00000016747	ptrh1	69	32.948	Scophthalmus_maximus
YHR189W	PTH1	91	34.091	ENSSDUG00000013471	ptrh1	82	34.375	Seriola_dumerili
YHR189W	PTH1	89	33.526	ENSSLDG00000024662	ptrh1	78	32.796	Seriola_lalandi_dorsalis
YHR189W	PTH1	92	31.148	ENSSPUG00000000040	PTRH1	74	31.148	Sphenodon_punctatus
YHR189W	PTH1	97	33.333	ENSSPAG00000003298	ptrh1	87	32.787	Stegastes_partitus
YHR189W	PTH1	87	31.361	ENSSSCG00000005615	PTRH1	74	31.361	Sus_scrofa
YHR189W	PTH1	92	35.393	ENSTRUG00000019801	PTRH1	62	35.393	Takifugu_rubripes
YHR189W	PTH1	92	34.270	ENSTNIG00000016735	ptrh1	75	34.270	Tetraodon_nigroviridis
YHR189W	PTH1	88	31.361	ENSUAMG00000023948	-	72	31.361	Ursus_americanus
YHR189W	PTH1	88	30.769	ENSVVUG00000013198	PTRH1	72	30.769	Vulpes_vulpes
YHR189W	PTH1	89	31.953	ENSXETG00000009980	ptrh1	85	31.953	Xenopus_tropicalis
YHR189W	PTH1	94	32.240	ENSXCOG00000011498	ptrh1	74	32.240	Xiphophorus_couchianus
YHR189W	PTH1	97	33.333	ENSXMAG00000009256	ptrh1	67	33.333	Xiphophorus_maculatus