EuRBPDB

Description

Ensembl ID: YIL052C (Gene tree)
Gene ID: -
Gene Symbol: RPL34B
Alias: -
Full Name: Ribosomal 60S subunit protein L34B%3B homologous to mammalian ribosomal protein L34%2C no bacterial homolog%3B RPL34B has a paralog%2C RPL34A%2C that arose from the whole genome duplication
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 838 bases
Position: chrIX:256226-257063
Accession: S000001314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YIL052C_mRNA	Ribosomal_L34e	PF01199.18	2.4e-43	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YIL052C_mRNA	-	366	-	YIL052C_mRNA	121 (aa)	-	P40525

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YIL052C	RPL34B	100	98.347	YER056C-A	RPL34A	100	98.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YIL052C	RPL34B	91	54.545	WBGene00004448	rpl-34	98	55.556	Caenorhabditis_elegans
YIL052C	RPL34B	91	50.909	ENSCING00000000338	-	97	51.852	Ciona_intestinalis
YIL052C	RPL34B	91	52.727	ENSCSAVG00000009906	-	97	53.704	Ciona_savignyi
YIL052C	RPL34B	92	59.459	FBgn0037686	RpL34b	61	60.784	Drosophila_melanogaster
YIL052C	RPL34B	92	59.459	FBgn0039406	RpL34a	63	60.784	Drosophila_melanogaster
YIL052C	RPL34B	90	55.856	ENSSLDG00000008715	-	95	55.856	Seriola_lalandi_dorsalis