EuRBPDB

Description

Ensembl ID: YIL061C (Gene tree)
Gene ID: -
Gene Symbol: SNP1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 903
Position: chrIX:244657-245559
Accession: S000001323
RBP type: canonical RBP
Summary: Component of U1 snRNP required for mRNA splicing via spliceosome%3B substrate of the arginine methyltransferase Hmt1p%3B may interact with poly(A) polymerase to regulate polyadenylation%3B homolog of human U1 70K protein%3B protein abundance increases in response to DNA replication stress

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YIL061C_mRNA	RRM_1	PF00076.22	5e-16	1	1
YIL061C_mRNA	U1snRNP70_N	PF12220.8	4.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YIL061C_mRNA	-	903	-	YIL061C_mRNA	300 (aa)	-	Q00916

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YIL061C	SNP1	65	33.498	WBGene00004390	rnp-7	54	31.746	Caenorhabditis_elegans
YIL061C	SNP1	63	30.256	ENSGMOG00000011492	snrnp70	81	31.795	Gadus_morhua
YIL061C	SNP1	63	30.256	ENSGACG00000000448	snrnp70	56	32.275	Gasterosteus_aculeatus
YIL061C	SNP1	62	31.016	ENSMMUG00000004928	SNRNP70	89	30.573	Macaca_mulatta