EuRBPDB

Description

Ensembl ID: YIR002C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 2982
Position: chrIX:357415-360396
Accession: S000001441
RBP type: canonical RBP
Summary: 3'-5' DNA helicase involved in error-free bypass of DNA lesions%3B binds flap DNA%2C stimulates activity of Rad27p and Dna2p%3B prevents crossovers between ectopic sequences by removing substrates for Mus81-Mms4 or Rad1-Rad10 cleavage%3B homolog of human FANCM Fanconi anemia protein that is involved in stabilizing and remodeling blocked replication forks%3B member of SF2 DExD/H superfamily of helicases%3B nonsense or missense mutations in FANCM can make people more likely to get cancer

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YIR002C_mRNA	ResIII	PF04851.15	2.3e-21	1	1
YIR002C_mRNA	DEAD	PF00270.29	1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YIR002C_mRNA	-	2982	-	YIR002C_mRNA	993 (aa)	-	P40562

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YIR002C	-	60	31.270	ENSG00000187790	FANCM	85	31.220	Homo_sapiens
YIR002C	-	60	32.057	ENSACIG00000005444	-	86	32.057	Amphilophus_citrinellus
YIR002C	-	60	31.062	ENSBTAG00000002612	FANCM	60	49.776	Bos_taurus
YIR002C	-	60	31.571	ENSCAFG00020022069	-	85	31.782	Canis_lupus_dingo
YIR002C	-	60	31.761	ENSTSYG00000036497	-	84	31.761	Carlito_syrichta
YIR002C	-	55	44.030	ENSEASG00005007781	FANCM	87	31.013	Equus_asinus_asinus
YIR002C	-	60	31.379	ENSFCAG00000022146	-	84	31.479	Felis_catus
YIR002C	-	67	30.963	ENSHCOG00000013769	-	88	30.815	Hippocampus_comes
YIR002C	-	61	30.174	ENSIPUG00000014629	fancm	54	47.945	Ictalurus_punctatus
YIR002C	-	60	31.369	ENSMUSG00000055884	Fancm	85	31.250	Mus_musculus
YIR002C	-	60	31.487	ENSPPRG00000011952	-	84	31.587	Panthera_pardus
YIR002C	-	60	31.646	ENSPTIG00000018621	-	84	31.646	Panthera_tigris_altaica
YIR002C	-	60	32.803	ENSPCIG00000005354	-	84	32.803	Phascolarctos_cinereus
YIR002C	-	60	32.006	ENSRNOG00000056721	Fancm	56	31.529	Rattus_norvegicus
YIR002C	-	61	32.432	ENSSMAG00000019903	-	54	49.107	Scophthalmus_maximus
YIR002C	-	63	32.067	ENSSDUG00000016682	-	87	32.848	Seriola_dumerili
YIR002C	-	60	33.227	ENSTRUG00000009756	-	86	33.227	Takifugu_rubripes
YIR002C	-	55	43.704	ENSUMAG00000007704	-	82	30.968	Ursus_maritimus