EuRBPDB

Description

Ensembl ID: YIR005W (Gene tree)
Gene ID: -
Gene Symbol: IST3
Alias: SNU17
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 447
Position: chrIX:364889-365335
Accession: S000001444
RBP type: canonical RBP
Summary: Component of the U2 snRNP%3B required for the first catalytic step of splicing and for spliceosomal assembly%3B interacts with Rds3p and is required for Mer1p-activated splicing%3B diploid mutants have a specific defect in MATa1 pre-mRNA splicing which leads to haploid gene expression in diploids

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YIR005W_mRNA	RRM_1	PF00076.22	1.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YIR005W_mRNA	-	447	-	YIR005W_mRNA	148 (aa)	-	P40565

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YIR005W	IST3	75	56.637	ENSG00000134597	RBMX2	84	52.000	Homo_sapiens
YIR005W	IST3	53	59.494	ENSAPLG00000010127	RBMX2	74	55.056	Anas_platyrhynchos
YIR005W	IST3	100	42.282	FBgn0032822	CG10466	95	42.282	Drosophila_melanogaster
YIR005W	IST3	76	50.000	ENSGMOG00000000253	rbmx2	52	50.000	Gadus_morhua
YIR005W	IST3	76	49.123	ENSGACG00000001855	rbmx2	52	49.123	Gasterosteus_aculeatus
YIR005W	IST3	98	46.897	ENSHGLG00000008080	RBMX2	50	46.897	Heterocephalus_glaber_female
YIR005W	IST3	53	56.962	ENSMGAG00000001801	RBMX2	63	56.962	Meleagris_gallopavo
YIR005W	IST3	85	38.686	ENSMODG00000011981	-	83	38.686	Monodelphis_domestica
YIR005W	IST3	75	56.637	ENSMLUG00000023163	-	64	56.637	Myotis_lucifugus
YIR005W	IST3	84	46.825	ENSOCUG00000020937	-	72	46.825	Oryctolagus_cuniculus
YIR005W	IST3	64	42.609	ENSOMEG00000013873	RBMX2	84	42.609	Oryzias_melastigma
YIR005W	IST3	64	39.837	ENSPKIG00000008614	-	86	39.837	Paramormyrops_kingsleyae
YIR005W	IST3	74	54.955	ENSPCIG00000013378	-	71	54.955	Phascolarctos_cinereus
YIR005W	IST3	98	47.586	ENSPCOG00000026182	RBMX2	51	47.586	Propithecus_coquereli
YIR005W	IST3	51	55.263	ENSTGUG00000005239	RBMX2	64	55.263	Taeniopygia_guttata
YIR005W	IST3	74	54.955	ENSTNIG00000007672	rbmx2	70	54.955	Tetraodon_nigroviridis