EuRBPDB

Description

Ensembl ID: YJL052W (Gene tree)
Gene ID: -
Gene Symbol: TDH1
Alias: GLD3
Full Name: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)%2C isozyme 1%3B involved in glycolysis and gluconeogenesis%3B tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1%2C3 bis-phosphoglycerate%3B detected in the cytoplasm and cell wall%3B protein abundance increases in response to DNA replication stress%3B GAPDH-derived antimicrobial peptides secreted by S. cerevisiae are active against a wide variety of wine-related yeasts and bateria
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 999
Position: chrX: 338271-339269
Accession: S000003588
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YJL052W_mRNA	-	999	-	YJL052W_mRNA	332 (aa)	-	P00360

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YJL052W	TDH1	99	67.964	WBGene00001683	gpd-1	98	67.964	Caenorhabditis_elegans
YJL052W	TDH1	98	66.967	WBGene00001684	gpd-2	98	66.967	Caenorhabditis_elegans
YJL052W	TDH1	99	67.365	WBGene00001686	gpd-4	98	67.365	Caenorhabditis_elegans
YJL052W	TDH1	99	64.438	ENSG00000111640	GAPDH	98	69.020	Homo_sapiens
YJL052W	TDH1	99	65.455	ENSMUSG00000057666	Gapdh	100	68.214	Mus_musculus
YJL052W	TDH1	100	88.554	YJR009C	TDH2	100	88.554	Saccharomyces_cerevisiae
YJL052W	TDH1	100	88.253	YGR192C	TDH3	100	88.253	Saccharomyces_cerevisiae