EuRBPDB

Description

Ensembl ID: YJL087C (Gene tree)
Gene ID: -
Gene Symbol: TRL1
Alias: LIG1|RLG1
Full Name: tRNA ligase%3B required for tRNA splicing and for both splicing and translation of HAC1 mRNA in the UPR%3B has phosphodiesterase%2C polynucleotide kinase%2C and ligase activities%3B localized at the inner nuclear envelope and partially to polysomes
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 2484 bases
Position: chrX:270002-272485
Accession: S000003623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YJL087C_mRNA	tRNA_lig_kinase	PF08303.11	2.2e-77	1	1
YJL087C_mRNA	tRNA_lig_CPD	PF08302.11	7.5e-63	1	1
YJL087C_mRNA	RNA_lig_T4_1	PF09511.10	1.7e-83	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YJL087C_mRNA	-	2484	-	YJL087C_mRNA	827 (aa)	-	P09880

Gene Model

Protein-Protein Interaction (PPI)