EuRBPDB

Description

Ensembl ID: YJR009C (Gene tree)
Gene ID: -
Gene Symbol: TDH2
Alias: GLD2
Full Name: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)%2C isozyme 2%3B involved in glycolysis and gluconeogenesis%3B tetramer that catalyzes reaction of glyceraldehyde-3-phosphate to 1%2C3 bis-phosphoglycerate%3B detected in cytoplasm and cell wall%3B protein abundance increases in response to DNA replication stress%3B GAPDH-derived antimicrobial peptides are active against a wide variety of wine-related yeasts and bateria%3B TDH2 has a paralog%2C TDH3%2C that arose from the whole genome duplication
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 999
Position: chrX: 453683-454681
Accession: S000003769
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YJR009C_mRNA	-	999	-	YJR009C_mRNA	332 (aa)	-	P00358

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YJR009C	TDH2	98	66.667	WBGene00001683	gpd-1	98	66.667	Caenorhabditis_elegans
YJR009C	TDH2	98	65.165	WBGene00001684	gpd-2	98	65.165	Caenorhabditis_elegans
YJR009C	TDH2	98	66.066	WBGene00001686	gpd-4	98	66.066	Caenorhabditis_elegans
YJR009C	TDH2	99	64.742	ENSG00000111640	GAPDH	98	68.235	Homo_sapiens
YJR009C	TDH2	99	65.758	ENSMUSG00000057666	Gapdh	100	67.143	Mus_musculus
YJR009C	TDH2	100	96.386	YGR192C	TDH3	100	96.386	Saccharomyces_cerevisiae
YJR009C	TDH2	100	88.554	YJL052W	TDH1	100	88.554	Saccharomyces_cerevisiae