EuRBPDB

Description

Ensembl ID: YJR091C (Gene tree)
Gene ID: -
Gene Symbol: JSN1
Alias: PUF1
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 3276
Position: chrX:595061-598336
Accession: S000003851
RBP type: canonical RBP
Summary: Member of the Puf family of RNA-binding proteins%3B interacts with mRNAs encoding membrane-associated proteins%3B involved in localizing the Arp2/3 complex to mitochondria%3B overexpression causes increased sensitivity to benomyl%3B JSN1 has a paralog%2C PUF2%2C that arose from the whole genome duplication

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YJR091C_mRNA	RRM_1	PF00076.22	4.5e-08	1	1
YJR091C_mRNA	PUF	PF00806.19	1.1e-33	1	3
YJR091C_mRNA	PUF	PF00806.19	1.1e-33	2	3
YJR091C_mRNA	PUF	PF00806.19	1.1e-33	3	3

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YJR091C_mRNA	-	3276	-	YJR091C_mRNA	1091 (aa)	-	P47135

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YJR091C	JSN1	96	44.393	YPR042C	-	94	45.059