EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: YJR123W (Gene tree)
Gene ID: -
Gene Symbol: RPS5
Alias: -
Full Name: Protein component of the small (40S) ribosomal subunit%3B least basic of non-acidic ribosomal proteins%3B phosphorylated in vivo%3B essential for viability%3B homologous to mammalian ribosomal protein S5 and bacterial S7
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 678 bases
Position: chrX:651901-652578
Accession: S000003884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YJR123W_mRNA	Ribosomal_S7	PF00177.21	1.6e-37	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl.PAR_CL & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YJR123W_mRNA	-	678	-	YJR123W_mRNA	225 (aa)	-	P26783

Gene Model

Click here to download YJR123W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YJR123W's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YJR123W	RPS5	60	30.147	YJR113C	-	52	30.147

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YJR123W	RPS5	92	67.143	ENSG00000083845	RPS5	98	67.143	Homo_sapiens
YJR123W	RPS5	92	67.464	ENSAPOG00000023785	rps5	98	67.464	Acanthochromis_polyacanthus
YJR123W	RPS5	92	67.143	ENSAMEG00000007431	RPS5	98	67.143	Ailuropoda_melanoleuca
YJR123W	RPS5	92	67.464	ENSACIG00000007319	rps5	98	67.464	Amphilophus_citrinellus
YJR123W	RPS5	84	63.542	ENSAOCG00000021297	rps5	78	63.542	Amphiprion_ocellaris
YJR123W	RPS5	92	67.464	ENSAOCG00000010721	RPS5	98	67.464	Amphiprion_ocellaris
YJR123W	RPS5	85	61.224	ENSAPEG00000010045	rps5	95	61.224	Amphiprion_percula
YJR123W	RPS5	92	67.464	ENSATEG00000007911	rps5	98	67.464	Anabas_testudineus
YJR123W	RPS5	92	67.943	ENSACAG00000010996	RPS5	98	67.943	Anolis_carolinensis
YJR123W	RPS5	96	64.220	ENSANAG00000023153	-	96	64.220	Aotus_nancymaae
YJR123W	RPS5	92	67.143	ENSANAG00000020231	-	98	67.143	Aotus_nancymaae
YJR123W	RPS5	83	53.968	ENSANAG00000035789	-	97	53.371	Aotus_nancymaae
YJR123W	RPS5	92	67.464	ENSACLG00000007312	rps5	98	67.464	Astatotilapia_calliptera
YJR123W	RPS5	92	67.943	ENSAMXG00000029764	rps5	98	67.943	Astyanax_mexicanus
YJR123W	RPS5	92	67.143	ENSBTAG00000015989	RPS5	98	67.143	Bos_taurus
YJR123W	RPS5	83	68.783	WBGene00004474	rps-5	90	68.783	Caenorhabditis_elegans
YJR123W	RPS5	92	67.143	ENSCJAG00000000304	RPS5	95	67.143	Callithrix_jacchus
YJR123W	RPS5	92	67.143	ENSCAFG00000002366	RPS5	98	67.143	Canis_familiaris
YJR123W	RPS5	92	64.679	ENSCAFG00020014863	-	98	64.679	Canis_lupus_dingo
YJR123W	RPS5	92	67.143	ENSCHIG00000019536	RPS5	98	67.143	Capra_hircus
YJR123W	RPS5	96	65.596	ENSTSYG00000000076	-	98	67.143	Carlito_syrichta
YJR123W	RPS5	74	74.405	ENSCAPG00000017186	RPS5	82	74.405	Cavia_aperea
YJR123W	RPS5	92	67.143	ENSCPOG00000023995	RPS5	98	67.143	Cavia_porcellus
YJR123W	RPS5	92	52.174	ENSCCAG00000021605	-	97	52.174	Cebus_capucinus
YJR123W	RPS5	92	67.143	ENSCCAG00000020744	-	98	67.143	Cebus_capucinus
YJR123W	RPS5	96	54.587	ENSCCAG00000036875	-	96	54.587	Cebus_capucinus
YJR123W	RPS5	92	67.143	ENSCATG00000030198	RPS5	98	67.143	Cercocebus_atys
YJR123W	RPS5	83	63.830	ENSCATG00000040451	-	87	63.830	Cercocebus_atys
YJR123W	RPS5	92	67.143	ENSCLAG00000000313	RPS5	98	67.143	Chinchilla_lanigera
YJR123W	RPS5	92	52.133	ENSCSAG00000009927	-	97	52.133	Chlorocebus_sabaeus
YJR123W	RPS5	92	67.143	ENSCSAG00000001598	RPS5	98	67.143	Chlorocebus_sabaeus
YJR123W	RPS5	64	50.345	ENSCSAG00000015430	-	91	50.345	Chlorocebus_sabaeus
YJR123W	RPS5	92	67.464	ENSCPBG00000013028	RPS5	98	67.464	Chrysemys_picta_bellii
YJR123W	RPS5	83	67.725	ENSCING00000002448	-	93	67.725	Ciona_intestinalis
YJR123W	RPS5	83	67.725	ENSCSAVG00000005966	-	98	62.745	Ciona_savignyi
YJR123W	RPS5	92	67.143	ENSCANG00000032591	RPS5	98	67.143	Colobus_angolensis_palliatus
YJR123W	RPS5	92	48.341	ENSCANG00000028788	-	97	48.341	Colobus_angolensis_palliatus
YJR123W	RPS5	82	53.514	ENSCANG00000003782	-	84	53.514	Colobus_angolensis_palliatus
YJR123W	RPS5	92	67.619	ENSCGRG00001014197	Rps5	98	67.619	Cricetulus_griseus_chok1gshd
YJR123W	RPS5	83	60.317	ENSCGRG00000011329	Rps5	92	60.317	Cricetulus_griseus_crigri
YJR123W	RPS5	92	67.464	ENSCSEG00000011153	rps5	98	67.464	Cynoglossus_semilaevis
YJR123W	RPS5	52	74.138	ENSCVAG00000008716	rps5	93	74.138	Cyprinodon_variegatus
YJR123W	RPS5	52	49.606	ENSCVAG00000023171	RPS5	74	49.606	Cyprinodon_variegatus
YJR123W	RPS5	95	65.278	ENSDARG00000043453	rps5	99	65.278	Danio_rerio
YJR123W	RPS5	84	54.211	ENSDNOG00000037158	-	83	54.211	Dasypus_novemcinctus
YJR123W	RPS5	92	66.667	ENSDNOG00000047505	-	98	66.667	Dasypus_novemcinctus
YJR123W	RPS5	92	67.619	ENSDORG00000002165	-	98	67.619	Dipodomys_ordii
YJR123W	RPS5	82	56.452	ENSDORG00000023488	-	91	56.452	Dipodomys_ordii
YJR123W	RPS5	98	65.315	FBgn0002590	RpS5a	93	65.315	Drosophila_melanogaster
YJR123W	RPS5	92	64.286	FBgn0038277	RpS5b	91	64.286	Drosophila_melanogaster
YJR123W	RPS5	92	54.067	ENSETEG00000013543	-	98	54.067	Echinops_telfairi
YJR123W	RPS5	80	57.923	ENSEBUG00000008049	-	68	57.923	Eptatretus_burgeri
YJR123W	RPS5	92	67.143	ENSEASG00005020216	RPS5	98	67.143	Equus_asinus_asinus
YJR123W	RPS5	73	68.862	ENSECAG00000016340	RPS5	51	66.857	Equus_caballus
YJR123W	RPS5	83	71.429	ENSELUG00000007427	rs5	94	71.429	Esox_lucius
YJR123W	RPS5	92	66.986	ENSELUG00000007527	RS5	97	67.476	Esox_lucius
YJR123W	RPS5	92	67.143	ENSFCAG00000027978	RPS5	98	67.143	Felis_catus
YJR123W	RPS5	92	67.143	ENSFDAG00000010753	RPS5	98	67.143	Fukomys_damarensis
YJR123W	RPS5	92	67.464	ENSFHEG00000009134	rps5	98	67.464	Fundulus_heteroclitus
YJR123W	RPS5	83	71.429	ENSGMOG00000015218	rps5	93	71.429	Gadus_morhua
YJR123W	RPS5	92	67.464	ENSGAFG00000002691	rps5	98	67.464	Gambusia_affinis
YJR123W	RPS5	83	71.958	ENSGACG00000002835	rps5	93	71.958	Gasterosteus_aculeatus
YJR123W	RPS5	92	67.464	ENSGAGG00000008180	RPS5	98	67.464	Gopherus_agassizii
YJR123W	RPS5	82	58.065	ENSGGOG00000026021	-	94	58.065	Gorilla_gorilla
YJR123W	RPS5	83	62.234	ENSGGOG00000041414	-	87	62.234	Gorilla_gorilla
YJR123W	RPS5	76	59.770	ENSGGOG00000025551	-	86	60.452	Gorilla_gorilla
YJR123W	RPS5	92	45.024	ENSGGOG00000022062	-	98	45.024	Gorilla_gorilla
YJR123W	RPS5	92	67.143	ENSGGOG00000004258	RPS5	98	67.143	Gorilla_gorilla
YJR123W	RPS5	87	62.121	ENSGGOG00000024360	-	90	62.121	Gorilla_gorilla
YJR123W	RPS5	92	67.464	ENSHBUG00000009305	rps5	98	67.464	Haplochromis_burtoni
YJR123W	RPS5	92	67.143	ENSHGLG00000007229	RPS5	98	67.143	Heterocephalus_glaber_female
YJR123W	RPS5	92	67.143	ENSHGLG00100013944	RPS5	98	67.143	Heterocephalus_glaber_male
YJR123W	RPS5	92	67.464	ENSHCOG00000007396	rps5	98	67.464	Hippocampus_comes
YJR123W	RPS5	92	67.464	ENSIPUG00000004835	rps5	98	67.464	Ictalurus_punctatus
YJR123W	RPS5	80	57.692	ENSSTOG00000029731	-	86	57.692	Ictidomys_tridecemlineatus
YJR123W	RPS5	92	67.143	ENSSTOG00000005935	-	98	67.143	Ictidomys_tridecemlineatus
YJR123W	RPS5	92	67.143	ENSJJAG00000002076	Rps5	98	67.143	Jaculus_jaculus
YJR123W	RPS5	92	67.464	ENSKMAG00000012994	rps5	98	67.464	Kryptolebias_marmoratus
YJR123W	RPS5	92	62.201	ENSLBEG00000019288	rps5	98	62.201	Labrus_bergylta
YJR123W	RPS5	93	66.509	ENSLBEG00000007150	RPS5	98	67.464	Labrus_bergylta
YJR123W	RPS5	95	66.512	ENSLACG00000009935	RPS5	99	66.512	Latimeria_chalumnae
YJR123W	RPS5	68	38.065	ENSLOCG00000000731	-	97	38.065	Lepisosteus_oculatus
YJR123W	RPS5	92	67.143	ENSLAFG00000008734	RPS5	98	67.143	Loxodonta_africana
YJR123W	RPS5	92	47.393	ENSMFAG00000002785	-	98	47.393	Macaca_fascicularis
YJR123W	RPS5	83	54.011	ENSMFAG00000042136	-	86	54.595	Macaca_fascicularis
YJR123W	RPS5	92	67.143	ENSMFAG00000002766	RPS5	98	67.143	Macaca_fascicularis
YJR123W	RPS5	83	53.476	ENSMMUG00000018997	-	91	53.476	Macaca_mulatta
YJR123W	RPS5	92	67.143	ENSMMUG00000008729	RPS5	98	67.143	Macaca_mulatta
YJR123W	RPS5	92	47.393	ENSMMUG00000042835	-	98	47.393	Macaca_mulatta
YJR123W	RPS5	92	67.143	ENSMNEG00000039816	RPS5	98	67.143	Macaca_nemestrina
YJR123W	RPS5	82	54.595	ENSMNEG00000031381	-	84	54.595	Macaca_nemestrina
YJR123W	RPS5	83	65.426	ENSMNEG00000042225	-	89	65.426	Macaca_nemestrina
YJR123W	RPS5	83	56.383	ENSMLEG00000035638	-	91	56.383	Mandrillus_leucophaeus
YJR123W	RPS5	83	54.545	ENSMLEG00000031826	-	86	55.135	Mandrillus_leucophaeus
YJR123W	RPS5	98	63.556	ENSMLEG00000028037	RPS5	98	67.143	Mandrillus_leucophaeus
YJR123W	RPS5	92	46.919	ENSMLEG00000040248	-	97	46.919	Mandrillus_leucophaeus
YJR123W	RPS5	92	67.464	ENSMAMG00000002747	rps5	98	67.464	Mastacembelus_armatus
YJR123W	RPS5	92	67.464	ENSMZEG00005026435	rps5	98	67.464	Maylandia_zebra
YJR123W	RPS5	92	67.619	ENSMAUG00000010731	Rps5	98	67.619	Mesocricetus_auratus
YJR123W	RPS5	92	67.143	ENSMICG00000016512	RPS5	98	67.143	Microcebus_murinus
YJR123W	RPS5	83	58.201	ENSMOCG00000017884	-	100	58.201	Microtus_ochrogaster
YJR123W	RPS5	92	67.619	ENSMOCG00000022992	-	98	67.619	Microtus_ochrogaster
YJR123W	RPS5	92	66.986	ENSMMOG00000014650	rps5	98	66.986	Mola_mola
YJR123W	RPS5	92	67.464	ENSMALG00000009648	rps5	98	67.464	Monopterus_albus
YJR123W	RPS5	92	67.619	MGP_CAROLIEiJ_G0029192	Rps5	98	67.619	Mus_caroli
YJR123W	RPS5	92	67.619	ENSMUSG00000012848	Rps5	98	67.619	Mus_musculus
YJR123W	RPS5	92	67.619	MGP_PahariEiJ_G0021054	Rps5	98	67.619	Mus_pahari
YJR123W	RPS5	92	67.619	MGP_SPRETEiJ_G0030268	Rps5	98	67.619	Mus_spretus
YJR123W	RPS5	74	74.405	ENSMPUG00000008308	RPS5	99	74.405	Mustela_putorius_furo
YJR123W	RPS5	92	65.877	ENSMLUG00000012641	RPS5	98	65.877	Myotis_lucifugus
YJR123W	RPS5	92	67.619	ENSNGAG00000015766	Rps5	98	67.619	Nannospalax_galili
YJR123W	RPS5	92	67.464	ENSNBRG00000018402	rps5	98	67.464	Neolamprologus_brichardi
YJR123W	RPS5	87	61.111	ENSNLEG00000018478	-	90	61.111	Nomascus_leucogenys
YJR123W	RPS5	84	58.031	ENSNLEG00000031782	-	88	58.031	Nomascus_leucogenys
YJR123W	RPS5	82	63.102	ENSNLEG00000034160	-	91	63.102	Nomascus_leucogenys
YJR123W	RPS5	56	77.778	ENSMEUG00000015400	-	66	77.778	Notamacropus_eugenii
YJR123W	RPS5	82	60.753	ENSODEG00000018813	-	91	60.753	Octodon_degus
YJR123W	RPS5	91	67.961	ENSODEG00000000899	-	96	67.961	Octodon_degus
YJR123W	RPS5	92	67.464	ENSONIG00000019659	rps5	98	67.464	Oreochromis_niloticus
YJR123W	RPS5	74	74.405	ENSOANG00000011921	RPS5	99	74.405	Ornithorhynchus_anatinus
YJR123W	RPS5	92	67.143	ENSOCUG00000024505	RPS5	98	67.143	Oryctolagus_cuniculus
YJR123W	RPS5	92	67.464	ENSORLG00000022059	rps5	98	67.464	Oryzias_latipes
YJR123W	RPS5	92	67.464	ENSORLG00020008989	rps5	98	67.464	Oryzias_latipes_hni
YJR123W	RPS5	92	67.464	ENSORLG00015016306	rps5	98	67.464	Oryzias_latipes_hsok
YJR123W	RPS5	92	67.464	ENSOMEG00000008257	rps5	98	67.464	Oryzias_melastigma
YJR123W	RPS5	92	67.143	ENSOGAG00000013088	RPS5	98	67.143	Otolemur_garnettii
YJR123W	RPS5	92	67.143	ENSOARG00000003848	RPS5	98	67.143	Ovis_aries
YJR123W	RPS5	92	67.143	ENSPPAG00000039568	RPS5	98	67.143	Pan_paniscus
YJR123W	RPS5	92	46.919	ENSPPAG00000037379	-	98	46.919	Pan_paniscus
YJR123W	RPS5	82	56.989	ENSPPAG00000029021	-	94	56.989	Pan_paniscus
YJR123W	RPS5	96	59.447	ENSPPAG00000037203	-	80	59.447	Pan_paniscus
YJR123W	RPS5	92	67.143	ENSPPRG00000003031	RPS5	98	67.143	Panthera_pardus
YJR123W	RPS5	92	67.143	ENSPTIG00000019819	RPS5	98	67.143	Panthera_tigris_altaica
YJR123W	RPS5	92	47.393	ENSPTRG00000051381	-	98	47.393	Pan_troglodytes
YJR123W	RPS5	94	60.849	ENSPTRG00000051033	-	80	60.849	Pan_troglodytes
YJR123W	RPS5	92	67.143	ENSPTRG00000011591	RPS5	98	67.143	Pan_troglodytes
YJR123W	RPS5	83	62.766	ENSPTRG00000049193	-	92	62.766	Pan_troglodytes
YJR123W	RPS5	81	56.216	ENSPTRG00000045137	-	94	56.216	Pan_troglodytes
YJR123W	RPS5	74	74.405	ENSPANG00000014392	RPS5	85	82.828	Papio_anubis
YJR123W	RPS5	83	55.080	ENSPANG00000029789	-	86	55.676	Papio_anubis
YJR123W	RPS5	92	67.464	ENSPKIG00000011575	rps5	98	67.464	Paramormyrops_kingsleyae
YJR123W	RPS5	92	67.464	ENSPMGG00000000854	rps5	98	67.961	Periophthalmus_magnuspinnatus
YJR123W	RPS5	92	67.619	ENSPEMG00000015167	Rps5	98	67.619	Peromyscus_maniculatus_bairdii
YJR123W	RPS5	92	67.143	ENSPCIG00000026774	RPS5	98	67.143	Phascolarctos_cinereus
YJR123W	RPS5	92	67.464	ENSPFOG00000002010	rps5	98	67.464	Poecilia_formosa
YJR123W	RPS5	92	67.464	ENSPLAG00000009866	rps5	98	67.464	Poecilia_latipinna
YJR123W	RPS5	92	67.464	ENSPMEG00000005285	rps5	98	67.464	Poecilia_mexicana
YJR123W	RPS5	92	67.464	ENSPREG00000001896	rps5	81	67.464	Poecilia_reticulata
YJR123W	RPS5	92	66.667	ENSPPYG00000010500	RPS5	98	66.667	Pongo_abelii
YJR123W	RPS5	92	67.143	ENSPCAG00000011034	RPS5	98	67.143	Procavia_capensis
YJR123W	RPS5	96	65.138	ENSPCOG00000016007	RPS5	98	67.143	Propithecus_coquereli
YJR123W	RPS5	92	67.143	ENSPVAG00000013966	RPS5	98	67.143	Pteropus_vampyrus
YJR123W	RPS5	92	67.464	ENSPNYG00000016183	rps5	98	67.464	Pundamilia_nyererei
YJR123W	RPS5	92	67.464	ENSPNAG00000014022	rps5	98	67.464	Pygocentrus_nattereri
YJR123W	RPS5	92	67.619	ENSRNOG00000019453	Rps5	98	67.619	Rattus_norvegicus
YJR123W	RPS5	95	65.741	ENSRBIG00000027783	RPS5	98	67.143	Rhinopithecus_bieti
YJR123W	RPS5	83	50.000	ENSRBIG00000031827	-	91	50.000	Rhinopithecus_bieti
YJR123W	RPS5	92	48.341	ENSRROG00000039369	-	97	48.341	Rhinopithecus_roxellana
YJR123W	RPS5	95	65.741	ENSRROG00000036995	RPS5	93	65.741	Rhinopithecus_roxellana
YJR123W	RPS5	79	62.011	ENSSBOG00000033455	-	89	72.727	Saimiri_boliviensis_boliviensis
YJR123W	RPS5	92	67.143	ENSSBOG00000030947	-	98	67.143	Saimiri_boliviensis_boliviensis
YJR123W	RPS5	92	67.143	ENSSHAG00000000092	RPS5	98	67.143	Sarcophilus_harrisii
YJR123W	RPS5	92	67.464	ENSSFOG00015016609	rps5	98	67.464	Scleropages_formosus
YJR123W	RPS5	92	66.029	ENSSFOG00015019773	rps5	99	66.029	Scleropages_formosus
YJR123W	RPS5	92	66.986	ENSSMAG00000020321	rps5	98	66.986	Scophthalmus_maximus
YJR123W	RPS5	92	67.464	ENSSDUG00000019721	rps5	98	67.464	Seriola_dumerili
YJR123W	RPS5	84	57.895	ENSSLDG00000006453	-	97	57.895	Seriola_lalandi_dorsalis
YJR123W	RPS5	92	67.464	ENSSLDG00000024207	rps5	98	67.464	Seriola_lalandi_dorsalis
YJR123W	RPS5	92	67.143	ENSSARG00000001506	RPS5	98	67.143	Sorex_araneus
YJR123W	RPS5	92	67.464	ENSSPUG00000014897	RPS5	98	67.464	Sphenodon_punctatus
YJR123W	RPS5	92	55.024	ENSSPAG00000005082	rps5	96	55.024	Stegastes_partitus
YJR123W	RPS5	92	67.143	ENSSSCG00000004002	RPS5	98	67.143	Sus_scrofa
YJR123W	RPS5	83	72.487	ENSTRUG00000023565	rps5	93	72.487	Takifugu_rubripes
YJR123W	RPS5	60	65.441	ENSTNIG00000001130	rps5	91	65.441	Tetraodon_nigroviridis
YJR123W	RPS5	80	62.431	ENSTBEG00000016955	RPS5	95	62.431	Tupaia_belangeri
YJR123W	RPS5	92	62.857	ENSTTRG00000001991	RPS5	98	62.857	Tursiops_truncatus
YJR123W	RPS5	92	67.143	ENSUAMG00000019475	RPS5	98	67.143	Ursus_americanus
YJR123W	RPS5	92	67.143	ENSUMAG00000003934	RPS5	98	67.143	Ursus_maritimus
YJR123W	RPS5	68	59.355	ENSVPAG00000000903	RPS5	97	59.355	Vicugna_pacos
YJR123W	RPS5	92	67.143	ENSVVUG00000002269	RPS5	93	67.143	Vulpes_vulpes
YJR123W	RPS5	95	66.512	ENSXETG00000020355	rps5	98	66.512	Xenopus_tropicalis
YJR123W	RPS5	92	67.464	ENSXCOG00000019549	rps5	98	67.464	Xiphophorus_couchianus
YJR123W	RPS5	92	67.464	ENSXMAG00000014201	rps5	98	67.464	Xiphophorus_maculatus