EuRBPDB

Description

Ensembl ID: YKL145W (Gene tree)
Gene ID: -
Gene Symbol: RPT1
Alias: CIM5|YTA3
Full Name: ATPase of the 19S regulatory particle of the 26S proteasome%3B one of six ATPases of the regulatory particle%3B involved in the degradation of ubiquitinated substrates%3B required for optimal CDC20 transcription%3B interacts with Rpn12p and Ubr1p%3B mutant has aneuploidy tolerance
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 1404
Position: chrXI: 174213-175616
Accession: S000001628
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YKL145W_mRNA	-	1404	-	YKL145W_mRNA	467 (aa)	-	P33299

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YKL145W	RPT1	97	70.732	WBGene00004501	rpt-1	94	71.526	Caenorhabditis_elegans
YKL145W	RPT1	70	46.319	WBGene00004502	rpt-2	70	47.115	Caenorhabditis_elegans
YKL145W	RPT1	57	50.943	WBGene00004503	rpt-3	64	50.943	Caenorhabditis_elegans
YKL145W	RPT1	96	72.197	ENSG00000161057	PSMC2	99	72.365	Homo_sapiens
YKL145W	RPT1	66	54.870	ENSG00000087191	PSMC5	90	52.344	Homo_sapiens
YKL145W	RPT1	69	48.750	ENSG00000100519	PSMC6	99	53.030	Homo_sapiens
YKL145W	RPT1	58	53.532	ENSG00000100764	PSMC1	95	61.250	Homo_sapiens
YKL145W	RPT1	63	48.148	ENSG00000165916	PSMC3	74	48.148	Homo_sapiens
YKL145W	RPT1	67	51.768	YGL048C	RPT6	76	51.780	Saccharomyces_cerevisiae
YKL145W	RPT1	67	45.048	YDL007W	RPT2	65	47.887	Saccharomyces_cerevisiae
YKL145W	RPT1	59	49.821	YDR394W	RPT3	65	49.821	Saccharomyces_cerevisiae