EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
YLR022C (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Saccharomyces_cerevisiae
Status
confidence
Strand
Minus strand
Length
753
Position
chrXII:184174-184926
Accession
S000004012
RBP type
canonical RBP
Summary
Guanine nucleotide exchange factor (GEF) for Ria1p%3B essential protein involved in ribosome maturation%3B with Ria1p%2C promotes release of Tif6p from 60S ribosomal subunits in the cytoplasm so that they can assemble with 40S subunits to generate mature ribosomes%3B ortholog of the human protein (SBDS) responsible for autosomal recessive Shwachman-Bodian-Diamond Syndrome%3B highly conserved across archaea and eukaryotes
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
YLR022C_mRNASBDSPF01172.183.1e-3411
YLR022C_mRNASBDS_CPF09377.103e-3011
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26632259The RNA-binding proteomes from yeast to man harbour conserved enigmRBPsRIC.PAR_CL & yeast2015 Dec 3Beckmann BMDOI: 10.1038/ncomms10127
21124907A screen for RNA binding proteins in yeast indicates dual functions for many enzymesProtoArray & yeast2010 Nov 11DOI: 10.1371/journal.pone.0015499
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
YLR022C_mRNA-753-YLR022C_mRNA250 (aa)-Q07953
Gene Model
Click here to download YLR022C's gene model file
Protein-Protein Interaction (PPI)

Clik here to download YLR022C's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
YLR022C-9643.320ENSG00000126524SBDS9066.234Homo_sapiens
YLR022C-9643.496ENSAPOG00000014285sbds9643.496Acanthochromis_polyacanthus
YLR022C-9642.449ENSAMEG00000018167SBDS9643.673Ailuropoda_melanoleuca
YLR022C-9643.089ENSACIG00000007308sbds9643.089Amphilophus_citrinellus
YLR022C-9643.089ENSAOCG00000016770sbds9643.089Amphiprion_ocellaris
YLR022C-9643.496ENSAPEG00000015897sbds9643.496Amphiprion_percula
YLR022C-9643.902ENSATEG00000006901sbds9643.902Anabas_testudineus
YLR022C-7145.763ENSANAG00000024342-9556.627Aotus_nancymaae
YLR022C-7940.196ENSANAG00000037501-9540.594Aotus_nancymaae
YLR022C-9643.496ENSACLG00000018750sbds9643.496Astatotilapia_calliptera
YLR022C-9642.915ENSAMXG00000005361sbds9643.902Astyanax_mexicanus
YLR022C-9643.320ENSBTAG00000004051SBDS9644.082Bos_taurus
YLR022C-9141.631WBGene00021063sbds-18841.631Caenorhabditis_elegans
YLR022C-9643.320ENSCJAG00000041007SBDS9644.082Callithrix_jacchus
YLR022C-9641.296ENSCAFG00000010797SBDS9642.510Canis_familiaris
YLR022C-9642.449ENSCAFG00020005357SBDS9643.673Canis_lupus_dingo
YLR022C-9643.320ENSCHIG00000026854SBDS9644.082Capra_hircus
YLR022C-9643.320ENSTSYG00000033822SBDS9644.082Carlito_syrichta
YLR022C-6234.783ENSCAPG00000006634SBDS9634.146Cavia_aperea
YLR022C-9643.320ENSCPOG00000036143SBDS9644.082Cavia_porcellus
YLR022C-9643.320ENSCCAG00000020671SBDS9460.714Cebus_capucinus
YLR022C-9643.320ENSCATG00000039026SBDS9644.082Cercocebus_atys
YLR022C-6535.185ENSCLAG00000002113-9431.950Chinchilla_lanigera
YLR022C-9643.320ENSCLAG00000005721-9644.082Chinchilla_lanigera
YLR022C-9643.320ENSCSAG00000018275SBDS9644.082Chlorocebus_sabaeus
YLR022C-9640.891ENSCHOG00000003795SBDS9641.633Choloepus_hoffmanni
YLR022C-7148.023ENSCPBG00000014893SBDS9642.683Chrysemys_picta_bellii
YLR022C-9941.502ENSCSAVG00000011811-9841.502Ciona_savignyi
YLR022C-9642.915ENSCANG00000032368SBDS9644.082Colobus_angolensis_palliatus
YLR022C-6234.783ENSCGRG00001019886Sbds9634.337Cricetulus_griseus_chok1gshd
YLR022C-7940.196ENSCGRG00000009211Sbds9540.686Cricetulus_griseus_crigri
YLR022C-9644.309ENSCSEG00000005798sbds9644.309Cynoglossus_semilaevis
YLR022C-9441.949ENSCVAG00000001053sbds9243.882Cyprinodon_variegatus
YLR022C-9645.528ENSDARG00000027803sbds9645.528Danio_rerio
YLR022C-9643.320ENSDNOG00000041174SBDS9644.082Dasypus_novemcinctus
YLR022C-9641.700ENSDORG00000026218Sbds9642.857Dipodomys_ordii
YLR022C-8945.982FBgn0035714CG85499543.673Drosophila_melanogaster
YLR022C-7640.000ENSEBUG00000015780sbds8240.000Eptatretus_burgeri
YLR022C-9643.320ENSEASG00005008821SBDS9644.082Equus_asinus_asinus
YLR022C-9643.320ENSECAG00000008202SBDS9644.082Equus_caballus
YLR022C-7233.889ENSEEUG00000004768SBDS9632.161Erinaceus_europaeus
YLR022C-9643.496ENSELUG00000008382sbds9643.496Esox_lucius
YLR022C-9643.320ENSFCAG00000022142SBDS9643.673Felis_catus
YLR022C-9642.276ENSFALG00000013808SBDS9643.902Ficedula_albicollis
YLR022C-9643.320ENSFDAG00000018947-9644.082Fukomys_damarensis
YLR022C-9639.592ENSFHEG00000000708sbds9641.463Fundulus_heteroclitus
YLR022C-9642.276ENSGMOG00000018356sbds9542.276Gadus_morhua
YLR022C-7148.588ENSGALG00000027989SBDS9643.089Gallus_gallus
YLR022C-8941.410ENSGAFG00000014204sbds9641.410Gambusia_affinis
YLR022C-9641.870ENSGACG00000012697sbds9641.870Gasterosteus_aculeatus
YLR022C-5645.324ENSGAGG00000022402SBDS9439.904Gopherus_agassizii
YLR022C-7133.520ENSGGOG00000040023-9231.174Gorilla_gorilla
YLR022C-9643.496ENSHBUG00000002660sbds9643.496Haplochromis_burtoni
YLR022C-9643.673ENSHGLG00000009671SBDS9643.673Heterocephalus_glaber_female
YLR022C-9643.673ENSHGLG00100011332SBDS9643.673Heterocephalus_glaber_male
YLR022C-9643.089ENSHCOG00000018606sbds9643.089Hippocampus_comes
YLR022C-9641.463ENSIPUG00000006536sbds9643.089Ictalurus_punctatus
YLR022C-9642.449ENSJJAG00000012033-9642.449Jaculus_jaculus
YLR022C-9643.496ENSKMAG00000018542sbds9643.496Kryptolebias_marmoratus
YLR022C-9643.089ENSLBEG00000016687sbds9643.089Labrus_bergylta
YLR022C-9636.400ENSLACG00000018916SBDS9636.400Latimeria_chalumnae
YLR022C-9642.041ENSLOCG00000004073sbds9643.902Lepisosteus_oculatus
YLR022C-9642.857ENSLAFG00000008763SBDS9643.673Loxodonta_africana
YLR022C-9643.320ENSMFAG00000032620SBDS9644.082Macaca_fascicularis
YLR022C-9643.320ENSMMUG00000045653SBDS9644.082Macaca_mulatta
YLR022C-9643.320ENSMNEG00000031523SBDS9644.082Macaca_nemestrina
YLR022C-6147.771ENSMLEG00000036826SBDS7547.771Mandrillus_leucophaeus
YLR022C-9643.089ENSMAMG00000016062sbds9643.089Mastacembelus_armatus
YLR022C-9643.496ENSMZEG00005024385sbds9643.496Maylandia_zebra
YLR022C-7148.588ENSMGAG00000002119SBDS9643.089Meleagris_gallopavo
YLR022C-6648.780ENSMAUG00000022214-7248.780Mesocricetus_auratus
YLR022C-9643.320ENSMICG00000014366SBDS8166.234Microcebus_murinus
YLR022C-9642.683ENSMOCG00000011739Sbds9644.082Microtus_ochrogaster
YLR022C-7246.667ENSMMOG00000005061sbds7146.667Mola_mola
YLR022C-9642.041ENSMODG00000006644SBDS9643.902Monodelphis_domestica
YLR022C-9444.304ENSMALG00000010219sbds9244.304Monopterus_albus
YLR022C-9641.870MGP_CAROLIEiJ_G0027800Sbds10055.814Mus_caroli
YLR022C-9641.463ENSMUSG00000025337Sbds10055.814Mus_musculus
YLR022C-9641.870MGP_PahariEiJ_G0024384Sbds10055.814Mus_pahari
YLR022C-9641.463MGP_SPRETEiJ_G0028798Sbds10055.814Mus_spretus
YLR022C-6431.902ENSMPUG00000016192SBDS9034.356Mustela_putorius_furo
YLR022C-6934.637ENSMLUG00000013575SBDS9435.028Myotis_lucifugus
YLR022C-9642.276ENSNGAG00000012093Sbds9643.673Nannospalax_galili
YLR022C-9643.496ENSNBRG00000017027sbds9643.496Neolamprologus_brichardi
YLR022C-9643.320ENSNLEG00000013288SBDS9157.955Nomascus_leucogenys
YLR022C-9641.463ENSOPRG00000008721SBDS9642.857Ochotona_princeps
YLR022C-9632.245ENSODEG00000000137-8034.286Octodon_degus
YLR022C-9640.081ENSODEG00000019253-8040.816Octodon_degus
YLR022C-7037.714ENSODEG00000001116-9234.454Octodon_degus
YLR022C-9643.089ENSONIG00000005874sbds9643.089Oreochromis_niloticus
YLR022C-5747.552ENSOANG00000007674-9541.872Ornithorhynchus_anatinus
YLR022C-9642.510ENSOCUG00000003170SBDS9643.265Oryctolagus_cuniculus
YLR022C-9641.224ENSORLG00000023489sbds9842.400Oryzias_latipes
YLR022C-9642.041ENSORLG00020019282sbds9843.028Oryzias_latipes_hni
YLR022C-9642.041ENSORLG00015008005sbds9843.028Oryzias_latipes_hsok
YLR022C-9644.309ENSOMEG00000022747sbds9644.309Oryzias_melastigma
YLR022C-9642.915ENSOGAG00000009011-9643.673Otolemur_garnettii
YLR022C-9237.607ENSOGAG00000015036-9137.607Otolemur_garnettii
YLR022C-9643.320ENSOARG00000010609SBDS9644.082Ovis_aries
YLR022C-7149.718ENSPPAG00000043889-9643.673Pan_paniscus
YLR022C-9643.320ENSPPRG00000002307SBDS9643.673Panthera_pardus
YLR022C-9643.320ENSPTIG00000021308SBDS9643.673Panthera_tigris_altaica
YLR022C-7136.158ENSPTRG00000047744-9533.469Pan_troglodytes
YLR022C-7136.158ENSPTRG00000050835-9533.469Pan_troglodytes
YLR022C-9643.320ENSPTRG00000019254SBDS9644.082Pan_troglodytes
YLR022C-7149.718ENSPTRG00000048174-8846.269Pan_troglodytes
YLR022C-9643.320ENSPANG00000004078SBDS9643.673Papio_anubis
YLR022C-9642.041ENSPKIG00000006489sbds9643.089Paramormyrops_kingsleyae
YLR022C-7938.725ENSPSIG00000014603SBDS9440.594Pelodiscus_sinensis
YLR022C-9643.902ENSPMGG00000004246sbds9643.902Periophthalmus_magnuspinnatus
YLR022C-9642.276ENSPEMG00000008728Sbds9643.673Peromyscus_maniculatus_bairdii
YLR022C-9640.726ENSPCIG00000029718SBDS9642.683Phascolarctos_cinereus
YLR022C-9642.683ENSPFOG00000015837sbds9642.683Poecilia_formosa
YLR022C-9642.683ENSPLAG00000003641sbds9642.683Poecilia_latipinna
YLR022C-9642.683ENSPMEG00000019483sbds9642.683Poecilia_mexicana
YLR022C-9642.683ENSPREG00000018758sbds9642.683Poecilia_reticulata
YLR022C-9643.320ENSPPYG00000017513SBDS9644.082Pongo_abelii
YLR022C-9643.320ENSPCOG00000021098SBDS8166.234Propithecus_coquereli
YLR022C-9644.130ENSPVAG00000009369SBDS9644.130Pteropus_vampyrus
YLR022C-9643.089ENSPNYG00000022403sbds9643.089Pundamilia_nyererei
YLR022C-9643.496ENSPNAG00000001120sbds9643.496Pygocentrus_nattereri
YLR022C-9641.870ENSRNOG00000000888Sbds9642.857Rattus_norvegicus
YLR022C-9643.320ENSRBIG00000035557SBDS9644.082Rhinopithecus_bieti
YLR022C-9643.320ENSRROG00000040842-9644.082Rhinopithecus_roxellana
YLR022C-7145.763ENSRROG00000041986-6460.759Rhinopithecus_roxellana
YLR022C-8941.921ENSSBOG00000022460SBDS9542.731Saimiri_boliviensis_boliviensis
YLR022C-9635.102ENSSHAG00000010263SBDS9636.585Sarcophilus_harrisii
YLR022C-9642.449ENSSFOG00015001108sbds9643.902Scleropages_formosus
YLR022C-9643.089ENSSMAG00000020506sbds9643.089Scophthalmus_maximus
YLR022C-9642.276ENSSDUG00000001528sbds9642.276Seriola_dumerili
YLR022C-9642.276ENSSLDG00000003659sbds9642.276Seriola_lalandi_dorsalis
YLR022C-6149.673ENSSARG00000013132-10049.673Sorex_araneus
YLR022C-9641.633ENSSPUG00000002699SBDS9742.972Sphenodon_punctatus
YLR022C-9643.496ENSSPAG00000016419sbds9637.652Stegastes_partitus
YLR022C-9643.320ENSSSCG00000007732SBDS9644.082Sus_scrofa
YLR022C-9443.460ENSTRUG00000021443sbds9243.460Takifugu_rubripes
YLR022C-9442.616ENSTNIG00000019000sbds9242.616Tetraodon_nigroviridis
YLR022C-7143.503ENSTBEG00000001178SBDS9540.796Tupaia_belangeri
YLR022C-9642.449ENSUAMG00000001326SBDS9643.673Ursus_americanus
YLR022C-9642.449ENSUMAG00000015353SBDS9643.673Ursus_maritimus
YLR022C-9642.449ENSVVUG00000016478SBDS9643.673Vulpes_vulpes
YLR022C-9645.306ENSXETG00000010093sbds9645.122Xenopus_tropicalis
YLR022C-7946.465ENSXCOG00000010639sbds8646.465Xiphophorus_couchianus
YLR022C-9642.683ENSXMAG00000006065sbds9642.683Xiphophorus_maculatus

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