EuRBPDB

Description

Ensembl ID: YLR058C (Gene tree)
Gene ID: -
Gene Symbol: SHM2
Alias: SHMT2
Full Name: Cytosolic serine hydroxymethyltransferase%3B converts serine to glycine plus 5%2C10 methylenetetrahydrofolate%3B major isoform involved in generating precursors for purine%2C pyrimidine%2C amino acid%2C and lipid biosynthesis
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 1410
Position: chrXII: 257992-259401
Accession: S000004048
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YLR058C_mRNA	-	1410	-	YLR058C_mRNA	469 (aa)	-	P37291

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YLR058C	SHM2	98	54.212	FBgn0029823	Shmt	99	54.212	Drosophila_melanogaster
YLR058C	SHM2	96	55.727	ENSG00000182199	SHMT2	100	63.248	Homo_sapiens
YLR058C	SHM2	96	55.947	ENSMUSG00000025403	Shmt2	90	55.947	Mus_musculus