EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YLR059C (Gene tree)
Gene ID: -
Gene Symbol: REX2
Alias: YNT20
Full Name: 3'-5' RNA exonuclease%3B involved in 3'-end processing of U4 and U5 snRNAs%2C 5S and 5.8S rRNAs%2C and RNase P and RNase MRP RNA%3B localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants%3B RNase D exonuclease
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 810 bases
Position: chrXII:259738-260547
Accession: S000004049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YLR059C_mRNA	RNase_T	PF00929.24	1e-42	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YLR059C_mRNA	-	810	-	YLR059C_mRNA	269 (aa)	-	P54964

Gene Model

Click here to download YLR059C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YLR059C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YLR059C	REX2	67	44.134	ENSG00000076043	REXO2	89	43.429	Homo_sapiens
YLR059C	REX2	67	44.134	ENSAMEG00000013263	REXO2	73	43.956	Ailuropoda_melanoleuca
YLR059C	REX2	68	42.857	ENSACIG00000023553	smfn	94	42.857	Amphilophus_citrinellus
YLR059C	REX2	80	39.823	ENSAPEG00000012435	smfn	81	39.823	Amphiprion_percula
YLR059C	REX2	86	38.655	ENSATEG00000015385	smfn	77	39.189	Anabas_testudineus
YLR059C	REX2	67	42.541	ENSAPLG00000005045	REXO2	84	42.541	Anas_platyrhynchos
YLR059C	REX2	68	44.505	ENSACAG00000011631	REXO2	81	44.505	Anolis_carolinensis
YLR059C	REX2	67	44.134	ENSANAG00000020834	REXO2	73	43.956	Aotus_nancymaae
YLR059C	REX2	75	42.574	ENSACLG00000024566	smfn	95	41.711	Astatotilapia_calliptera
YLR059C	REX2	67	44.134	ENSBTAG00000005843	REXO2	73	43.956	Bos_taurus
YLR059C	REX2	67	36.813	WBGene00007429	C08B6.8	87	41.176	Caenorhabditis_elegans
YLR059C	REX2	67	44.134	ENSCJAG00000012434	REXO2	73	43.956	Callithrix_jacchus
YLR059C	REX2	67	43.575	ENSCAFG00000013511	REXO2	73	43.407	Canis_familiaris
YLR059C	REX2	67	44.134	ENSCAFG00020002513	REXO2	73	43.956	Canis_lupus_dingo
YLR059C	REX2	67	44.134	ENSCHIG00000009264	REXO2	73	43.956	Capra_hircus
YLR059C	REX2	67	44.134	ENSTSYG00000002237	REXO2	73	43.956	Carlito_syrichta
YLR059C	REX2	65	39.205	ENSTSYG00000027948	-	88	38.889	Carlito_syrichta
YLR059C	REX2	64	43.605	ENSCAPG00000006093	REXO2	89	43.429	Cavia_aperea
YLR059C	REX2	67	44.134	ENSCPOG00000010548	REXO2	73	43.956	Cavia_porcellus
YLR059C	REX2	67	44.134	ENSCCAG00000034979	REXO2	73	43.956	Cebus_capucinus
YLR059C	REX2	67	44.134	ENSCATG00000015278	REXO2	73	43.956	Cercocebus_atys
YLR059C	REX2	67	44.134	ENSCLAG00000011195	REXO2	74	43.956	Chinchilla_lanigera
YLR059C	REX2	67	44.134	ENSCSAG00000002754	REXO2	73	43.956	Chlorocebus_sabaeus
YLR059C	REX2	67	42.458	ENSCHOG00000000642	-	73	42.308	Choloepus_hoffmanni
YLR059C	REX2	65	47.727	ENSCING00000009858	-	81	47.727	Ciona_intestinalis
YLR059C	REX2	67	44.134	ENSCANG00000034756	REXO2	73	43.956	Colobus_angolensis_palliatus
YLR059C	REX2	67	44.134	ENSCGRG00001013673	-	85	43.956	Cricetulus_griseus_chok1gshd
YLR059C	REX2	67	43.017	ENSCGRG00001010922	-	85	42.857	Cricetulus_griseus_chok1gshd
YLR059C	REX2	67	44.134	ENSCGRG00001019814	-	73	43.956	Cricetulus_griseus_chok1gshd
YLR059C	REX2	67	44.134	ENSCGRG00000006235	Rexo2	73	43.956	Cricetulus_griseus_crigri
YLR059C	REX2	69	44.086	ENSCSEG00000007214	smfn	64	44.086	Cynoglossus_semilaevis
YLR059C	REX2	67	43.889	ENSCVAG00000012008	smfn	92	43.575	Cyprinodon_variegatus
YLR059C	REX2	71	42.188	ENSDARG00000009806	smfn	71	42.188	Danio_rerio
YLR059C	REX2	65	44.000	ENSDNOG00000046533	REXO2	80	44.000	Dasypus_novemcinctus
YLR059C	REX2	67	44.134	ENSDORG00000011255	Rexo2	73	43.956	Dipodomys_ordii
YLR059C	REX2	75	36.453	ENSDORG00000025142	-	74	38.462	Dipodomys_ordii
YLR059C	REX2	73	42.857	FBgn0039115	CG10214	87	42.857	Drosophila_melanogaster
YLR059C	REX2	75	37.931	ENSEBUG00000013964	REXO2	65	39.086	Eptatretus_burgeri
YLR059C	REX2	67	44.134	ENSEASG00005006674	REXO2	73	43.956	Equus_asinus_asinus
YLR059C	REX2	67	44.134	ENSECAG00000005988	REXO2	73	43.956	Equus_caballus
YLR059C	REX2	69	44.086	ENSELUG00000020072	smfn	62	44.086	Esox_lucius
YLR059C	REX2	67	44.134	ENSFCAG00000018632	REXO2	73	43.956	Felis_catus
YLR059C	REX2	65	42.614	ENSFALG00000010044	REXO2	83	42.614	Ficedula_albicollis
YLR059C	REX2	67	44.134	ENSFDAG00000011764	REXO2	73	43.956	Fukomys_damarensis
YLR059C	REX2	70	42.328	ENSGMOG00000006370	smfn	94	42.328	Gadus_morhua
YLR059C	REX2	68	43.407	ENSGALG00000035980	REXO2	75	43.407	Gallus_gallus
YLR059C	REX2	73	43.000	ENSGAFG00000015349	smfn	64	44.624	Gambusia_affinis
YLR059C	REX2	69	43.011	ENSGACG00000020096	smfn	88	43.011	Gasterosteus_aculeatus
YLR059C	REX2	68	42.308	ENSGAGG00000021126	REXO2	76	42.308	Gopherus_agassizii
YLR059C	REX2	67	44.134	ENSGGOG00000023267	REXO2	73	43.956	Gorilla_gorilla
YLR059C	REX2	67	43.575	ENSHGLG00000013556	REXO2	73	43.407	Heterocephalus_glaber_female
YLR059C	REX2	67	44.134	ENSHGLG00100005257	REXO2	73	43.956	Heterocephalus_glaber_male
YLR059C	REX2	65	43.429	ENSHCOG00000007122	smfn	94	43.429	Hippocampus_comes
YLR059C	REX2	69	43.548	ENSIPUG00000020440	rexo2	66	43.548	Ictalurus_punctatus
YLR059C	REX2	67	44.134	ENSSTOG00000012465	REXO2	73	43.956	Ictidomys_tridecemlineatus
YLR059C	REX2	68	32.418	ENSJJAG00000022605	-	66	32.418	Jaculus_jaculus
YLR059C	REX2	67	44.134	ENSJJAG00000013710	-	73	43.956	Jaculus_jaculus
YLR059C	REX2	72	42.132	ENSKMAG00000016795	smfn	90	36.923	Kryptolebias_marmoratus
YLR059C	REX2	67	44.134	ENSLBEG00000006021	smfn	90	44.134	Labrus_bergylta
YLR059C	REX2	68	39.560	ENSLACG00000018623	REXO2	72	39.560	Latimeria_chalumnae
YLR059C	REX2	74	42.211	ENSLOCG00000002389	smfn	91	42.211	Lepisosteus_oculatus
YLR059C	REX2	67	44.134	ENSLAFG00000012451	REXO2	86	38.967	Loxodonta_africana
YLR059C	REX2	67	44.134	ENSMFAG00000041155	REXO2	73	43.956	Macaca_fascicularis
YLR059C	REX2	67	44.134	ENSMMUG00000012269	REXO2	73	43.956	Macaca_mulatta
YLR059C	REX2	67	44.134	ENSMNEG00000033379	REXO2	73	43.956	Macaca_nemestrina
YLR059C	REX2	67	44.134	ENSMLEG00000036571	REXO2	73	43.956	Mandrillus_leucophaeus
YLR059C	REX2	75	41.951	ENSMAMG00000021209	smfn	67	42.708	Mastacembelus_armatus
YLR059C	REX2	75	42.574	ENSMZEG00005023224	-	90	38.272	Maylandia_zebra
YLR059C	REX2	75	42.574	ENSMZEG00005020730	REXO2	90	38.272	Maylandia_zebra
YLR059C	REX2	51	43.478	ENSMGAG00000003026	REXO2	84	43.478	Meleagris_gallopavo
YLR059C	REX2	67	44.134	ENSMAUG00000014576	Rexo2	73	43.956	Mesocricetus_auratus
YLR059C	REX2	67	44.134	ENSMICG00000010094	REXO2	73	43.956	Microcebus_murinus
YLR059C	REX2	68	43.956	ENSMOCG00000009016	Rexo2	73	43.956	Microtus_ochrogaster
YLR059C	REX2	92	35.827	ENSMMOG00000006430	smfn	91	35.827	Mola_mola
YLR059C	REX2	77	41.063	ENSMODG00000013913	REXO2	83	41.063	Monodelphis_domestica
YLR059C	REX2	72	43.005	ENSMALG00000018130	smfn	53	43.005	Monopterus_albus
YLR059C	REX2	75	41.379	MGP_CAROLIEiJ_G0032166	Rexo2	73	43.956	Mus_caroli
YLR059C	REX2	75	41.379	ENSMUSG00000032026	Rexo2	73	43.956	Mus_musculus
YLR059C	REX2	75	41.379	MGP_PahariEiJ_G0015034	Rexo2	73	43.956	Mus_pahari
YLR059C	REX2	75	41.379	MGP_SPRETEiJ_G0033305	Rexo2	73	43.956	Mus_spretus
YLR059C	REX2	67	44.134	ENSMPUG00000003947	REXO2	73	43.956	Mustela_putorius_furo
YLR059C	REX2	67	44.134	ENSMLUG00000009030	REXO2	73	43.956	Myotis_lucifugus
YLR059C	REX2	67	44.134	ENSNGAG00000008819	Rexo2	85	43.956	Nannospalax_galili
YLR059C	REX2	70	42.246	ENSNBRG00000006529	smfn	95	42.246	Neolamprologus_brichardi
YLR059C	REX2	67	44.134	ENSNLEG00000029745	REXO2	73	43.956	Nomascus_leucogenys
YLR059C	REX2	68	43.407	ENSMEUG00000011558	REXO2	80	43.407	Notamacropus_eugenii
YLR059C	REX2	64	43.605	ENSODEG00000009750	-	89	43.429	Octodon_degus
YLR059C	REX2	65	34.444	ENSODEG00000016046	-	83	34.444	Octodon_degus
YLR059C	REX2	75	42.574	ENSONIG00000001954	smfn	81	41.837	Oreochromis_niloticus
YLR059C	REX2	65	44.318	ENSOANG00000001754	REXO2	75	41.935	Ornithorhynchus_anatinus
YLR059C	REX2	67	44.134	ENSOCUG00000004274	REXO2	70	43.956	Oryctolagus_cuniculus
YLR059C	REX2	75	39.303	ENSORLG00000005119	smfn	60	40.415	Oryzias_latipes
YLR059C	REX2	75	39.303	ENSORLG00020010121	smfn	60	40.415	Oryzias_latipes_hni
YLR059C	REX2	74	40.796	ENSORLG00015015699	smfn	60	40.415	Oryzias_latipes_hsok
YLR059C	REX2	70	41.489	ENSOMEG00000016878	REXO2	66	41.489	Oryzias_melastigma
YLR059C	REX2	67	44.134	ENSOGAG00000016860	REXO2	73	43.956	Otolemur_garnettii
YLR059C	REX2	67	44.134	ENSOARG00000001040	REXO2	82	43.956	Ovis_aries
YLR059C	REX2	67	44.134	ENSPPAG00000039849	REXO2	73	43.956	Pan_paniscus
YLR059C	REX2	67	44.134	ENSPPRG00000007255	REXO2	73	43.956	Panthera_pardus
YLR059C	REX2	64	43.605	ENSPTIG00000015578	REXO2	89	43.429	Panthera_tigris_altaica
YLR059C	REX2	67	44.134	ENSPTRG00000004306	REXO2	73	43.956	Pan_troglodytes
YLR059C	REX2	67	44.134	ENSPANG00000010675	REXO2	73	43.956	Papio_anubis
YLR059C	REX2	87	38.462	ENSPKIG00000000911	smfn	85	38.462	Paramormyrops_kingsleyae
YLR059C	REX2	68	42.857	ENSPSIG00000005151	REXO2	63	42.857	Pelodiscus_sinensis
YLR059C	REX2	67	43.017	ENSPMGG00000007442	smfn	91	43.017	Periophthalmus_magnuspinnatus
YLR059C	REX2	67	36.264	ENSPEMG00000001421	Rexo2	72	36.216	Peromyscus_maniculatus_bairdii
YLR059C	REX2	88	38.397	ENSPCIG00000011227	REXO2	52	41.063	Phascolarctos_cinereus
YLR059C	REX2	78	41.014	ENSPFOG00000017861	smfn	88	45.161	Poecilia_formosa
YLR059C	REX2	65	43.182	ENSPLAG00000007327	REXO2	64	43.182	Poecilia_latipinna
YLR059C	REX2	69	44.624	ENSPMEG00000017343	smfn	64	44.624	Poecilia_mexicana
YLR059C	REX2	71	43.229	ENSPREG00000016438	smfn	66	43.229	Poecilia_reticulata
YLR059C	REX2	67	44.134	ENSPPYG00000003895	REXO2	73	43.956	Pongo_abelii
YLR059C	REX2	81	38.249	ENSPCAG00000005237	REXO2	89	38.182	Procavia_capensis
YLR059C	REX2	59	43.125	ENSPCOG00000027639	REXO2	78	43.125	Propithecus_coquereli
YLR059C	REX2	67	37.430	ENSPVAG00000005295	REXO2	74	37.363	Pteropus_vampyrus
YLR059C	REX2	75	42.574	ENSPNYG00000018401	smfn	90	38.272	Pundamilia_nyererei
YLR059C	REX2	75	40.099	ENSPNAG00000005290	smfn	72	40.099	Pygocentrus_nattereri
YLR059C	REX2	75	41.379	ENSRNOG00000018939	Rexo2	73	43.956	Rattus_norvegicus
YLR059C	REX2	67	44.134	ENSRBIG00000037809	REXO2	73	43.956	Rhinopithecus_bieti
YLR059C	REX2	67	44.134	ENSRROG00000038928	REXO2	73	43.956	Rhinopithecus_roxellana
YLR059C	REX2	67	44.134	ENSSBOG00000028651	REXO2	73	43.956	Saimiri_boliviensis_boliviensis
YLR059C	REX2	77	41.063	ENSSHAG00000008008	REXO2	83	41.063	Sarcophilus_harrisii
YLR059C	REX2	67	42.458	ENSSFOG00015022414	smfn	91	42.458	Scleropages_formosus
YLR059C	REX2	71	43.684	ENSSMAG00000003168	smfn	66	43.684	Scophthalmus_maximus
YLR059C	REX2	76	41.346	ENSSDUG00000015624	smfn	63	43.617	Seriola_dumerili
YLR059C	REX2	76	40.865	ENSSLDG00000014005	smfn	63	43.085	Seriola_lalandi_dorsalis
YLR059C	REX2	50	42.222	ENSSARG00000014530	REXO2	100	42.222	Sorex_araneus
YLR059C	REX2	51	41.176	ENSSPUG00000006005	REXO2	72	41.176	Sphenodon_punctatus
YLR059C	REX2	67	44.693	ENSSPAG00000001530	smfn	92	44.693	Stegastes_partitus
YLR059C	REX2	67	44.134	ENSSSCG00000015056	REXO2	73	43.956	Sus_scrofa
YLR059C	REX2	68	43.407	ENSTGUG00000000121	REXO2	74	43.407	Taeniopygia_guttata
YLR059C	REX2	73	45.685	ENSTRUG00000021529	smfn	75	42.788	Takifugu_rubripes
YLR059C	REX2	68	43.478	ENSTNIG00000008588	smfn	84	41.117	Tetraodon_nigroviridis
YLR059C	REX2	67	44.134	ENSTBEG00000017040	REXO2	73	43.956	Tupaia_belangeri
YLR059C	REX2	78	39.048	ENSTTRG00000014928	REXO2	73	43.956	Tursiops_truncatus
YLR059C	REX2	67	39.665	ENSUAMG00000019096	REXO2	78	43.125	Ursus_americanus
YLR059C	REX2	67	44.134	ENSUMAG00000003770	REXO2	73	43.956	Ursus_maritimus
YLR059C	REX2	64	33.140	ENSVPAG00000006301	REXO2	91	32.961	Vicugna_pacos
YLR059C	REX2	67	44.134	ENSVVUG00000025223	REXO2	74	43.956	Vulpes_vulpes
YLR059C	REX2	77	42.233	ENSXETG00000012648	rexo2	71	45.355	Xenopus_tropicalis
YLR059C	REX2	86	38.362	ENSXCOG00000018838	smfn	91	43.316	Xiphophorus_couchianus
YLR059C	REX2	72	43.077	ENSXMAG00000021125	smfn	60	43.299	Xiphophorus_maculatus