EuRBPDB

Description

Ensembl ID: YLR136C (Gene tree)
Gene ID: -
Gene Symbol: TIS11
Alias: CTH2
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 858
Position: chrXII:415801-416658
Accession: S000004126
RBP type: canonical RBP
Summary: mRNA-binding protein expressed during iron starvation%3B binds to a sequence element in the 3'-untranslated regions of specific mRNAs to mediate their degradation%3B involved in iron homeostasis%3B protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress%3B TIS11 has a paralog%2C CTH1%2C that arose from the whole genome duplication

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YLR136C_mRNA	zf-CCCH	PF00642.24	2.1e-16	1	2
YLR136C_mRNA	zf-CCCH	PF00642.24	2.1e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YLR136C_mRNA	-	858	-	YLR136C_mRNA	285 (aa)	-	P47977

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YLR136C	TIS11	88	42.466	YDR151C	-	90	42.808