EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YLR143W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 2058
Position: chrXII:427329-429386
Accession: S000004133
RBP type: canonical RBP
Summary: Diphthamide synthetase%3B catalyzes the last amidation step of diphthamide biosynthesis using ammonium and ATP%3B evolutionarily conserved in eukaryotes%3B dph6 mutants exhibit diphthine accumulation and resistance to sordarin%2C which is indicative of defects in diphthamide formation on EF2%3B green fluorescent protein (GFP)-tagged protein localizes to the cytoplasm%3B DPH6/YLR143W is not an essential gene

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YLR143W_mRNA	Ribonuc_L-PSP	PF01042.21	6.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YLR143W_mRNA	-	2058	-	YLR143W_mRNA	685 (aa)	-	Q12429

Gene Model

Click here to download YLR143W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YLR143W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YLR143W	-	83	33.786	ENSAPOG00000011305	dph6	80	33.786	Acanthochromis_polyacanthus
YLR143W	-	66	37.100	ENSAPEG00000016201	dph6	88	37.100	Amphiprion_percula
YLR143W	-	83	34.564	ENSATEG00000010892	dph6	80	34.564	Anabas_testudineus
YLR143W	-	77	36.232	ENSACAG00000029596	DPH6	82	34.861	Anolis_carolinensis
YLR143W	-	79	34.513	ENSACLG00000013133	dph6	81	34.175	Astatotilapia_calliptera
YLR143W	-	87	32.686	ENSAMXG00000014741	dph6	95	36.017	Astyanax_mexicanus
YLR143W	-	83	33.058	ENSCPBG00000023858	DPH6	72	44.348	Chrysemys_picta_bellii
YLR143W	-	77	34.909	ENSCING00000009826	-	95	35.753	Ciona_intestinalis
YLR143W	-	66	38.178	ENSCSEG00000004856	dph6	91	38.178	Cynoglossus_semilaevis
YLR143W	-	66	34.568	ENSDARG00000042839	dph6	91	34.774	Danio_rerio
YLR143W	-	83	33.444	ENSELUG00000001148	dph6	84	32.137	Esox_lucius
YLR143W	-	85	31.329	ENSFALG00000005671	DPH6	81	31.329	Ficedula_albicollis
YLR143W	-	83	33.051	ENSFHEG00000020233	dph6	80	33.051	Fundulus_heteroclitus
YLR143W	-	82	34.435	ENSGMOG00000009867	dph6	78	34.435	Gadus_morhua
YLR143W	-	83	32.131	ENSGALG00000020438	DPH6	79	32.131	Gallus_gallus
YLR143W	-	80	32.230	ENSGAFG00000019653	dph6	79	32.230	Gambusia_affinis
YLR143W	-	90	33.648	ENSGACG00000010500	dph6	85	33.648	Gasterosteus_aculeatus
YLR143W	-	85	33.120	ENSGAGG00000009638	DPH6	82	33.120	Gopherus_agassizii
YLR143W	-	84	34.007	ENSHBUG00000017591	dph6	81	34.007	Haplochromis_burtoni
YLR143W	-	66	35.319	ENSHCOG00000001351	dph6	95	35.010	Hippocampus_comes
YLR143W	-	83	34.083	ENSIPUG00000006675	dph6	79	34.083	Ictalurus_punctatus
YLR143W	-	66	37.901	ENSLBEG00000028338	dph6	93	37.901	Labrus_bergylta
YLR143W	-	87	31.502	ENSLOCG00000012210	dph6	83	31.502	Lepisosteus_oculatus
YLR143W	-	83	34.014	ENSMAMG00000005786	dph6	80	34.354	Mastacembelus_armatus
YLR143W	-	79	34.513	ENSMZEG00005002494	dph6	81	34.175	Maylandia_zebra
YLR143W	-	50	30.709	ENSMGAG00000012297	-	97	30.709	Meleagris_gallopavo
YLR143W	-	68	32.866	ENSMODG00000001333	-	93	32.866	Monodelphis_domestica
YLR143W	-	66	32.712	ENSNBRG00000023582	dph6	93	32.712	Neolamprologus_brichardi
YLR143W	-	79	34.215	ENSONIG00000001400	dph6	80	34.122	Oreochromis_niloticus
YLR143W	-	83	34.228	ENSORLG00000013143	dph6	97	36.327	Oryzias_latipes
YLR143W	-	83	34.396	ENSORLG00020017769	dph6	80	34.396	Oryzias_latipes_hni
YLR143W	-	83	33.841	ENSOMEG00000000356	dph6	84	33.841	Oryzias_melastigma
YLR143W	-	66	36.025	ENSPSIG00000007964	DPH6	98	36.025	Pelodiscus_sinensis
YLR143W	-	68	36.270	ENSPMGG00000022140	dph6	97	36.270	Periophthalmus_magnuspinnatus
YLR143W	-	83	33.390	ENSPFOG00000015094	dph6	80	33.107	Poecilia_formosa
YLR143W	-	57	33.251	ENSPLAG00000021283	-	56	33.251	Poecilia_latipinna
YLR143W	-	67	30.561	ENSPMEG00000004238	-	75	30.561	Poecilia_mexicana
YLR143W	-	66	34.927	ENSPNYG00000016746	dph6	92	34.927	Pundamilia_nyererei
YLR143W	-	83	34.518	ENSPNAG00000008737	dph6	79	34.518	Pygocentrus_nattereri
YLR143W	-	83	34.237	ENSSFOG00015010539	dph6	80	34.237	Scleropages_formosus
YLR143W	-	83	33.956	ENSSMAG00000018800	dph6	80	33.956	Scophthalmus_maximus
YLR143W	-	83	34.014	ENSSDUG00000015167	dph6	80	34.014	Seriola_dumerili
YLR143W	-	83	33.731	ENSSLDG00000021120	dph6	80	33.731	Seriola_lalandi_dorsalis
YLR143W	-	83	33.786	ENSSPAG00000015649	dph6	80	33.786	Stegastes_partitus
YLR143W	-	83	34.401	ENSTRUG00000014191	dph6	80	34.401	Takifugu_rubripes
YLR143W	-	83	32.027	ENSXETG00000012897	dph6	79	32.027	Xenopus_tropicalis
YLR143W	-	83	33.959	ENSXMAG00000009590	dph6	80	33.959	Xiphophorus_maculatus