EuRBPDB

Description

Ensembl ID: YLR192C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 798
Position: chrXII:538792-539589
Accession: S000004182
RBP type: canonical RBP
Summary: eIF3j component of translation initiation factor 3 (eIF3)%3B dual function protein involved in translation initiation as a substoichiometric component (eIF3j) of eIF3%3B required for 20S pre-rRNA processing%3B required at post-transcriptional step for efficient retrotransposition%3B absence decreases Ty1 Gag:GFP protein levels%3B binds eIF3 subunits Rpg1p%2C Prt1p and 18S rRNA%3B eIF3 also involved in programmed stop codon read through%3B human homolog EIF3J can complement yeast hcr1 mutant

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YLR192C_mRNA	eIF3_subunit	PF08597.10	2.6e-54	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YLR192C_mRNA	-	798	-	YLR192C_mRNA	265 (aa)	-	Q05775

Gene Model

Protein-Protein Interaction (PPI)