EuRBPDB

Description

Ensembl ID: YLR262C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 648
Position: chrXII:668244-668891
Accession: S000004252
RBP type: canonical RBP
Summary: Rab family GTPase%3B required for endosome-to-Golgii%2C intra-Golgi retrograde%2C and retrograde Golgi-to-ER transport%3B temporarily at the Golgi%2C dissociating into the cytosol on arrival of the late Golgi GTPase Ypt32p%3B Golgi-localized form is GTP bound%2C while cytosolic form is GDP-bound%3B required for delivery of Atg9p to the phagophore assembly site during autophagy under heat stress%2C with Ypt6p for starvation induced autophagy and for the CVT pathway%3B homolog of mammalian Rab6

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YLR262C_mRNA	MMR_HSR1	PF01926.23	7.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YLR262C_mRNA	-	648	-	YLR262C_mRNA	215 (aa)	-	Q99260

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YLR262C	-	95	33.810	YGL210W	-	94	33.810
YLR262C	-	90	36.548	YER031C	YPT31	87	36.548
YLR262C	-	95	36.842	YML001W	YPT7	96	36.842
YLR262C	-	83	30.000	YCR027C	RHB1	89	30.000
YLR262C	-	97	38.073	YOR089C	VPS21	99	38.073
YLR262C	-	76	35.465	YNL093W	-	76	35.465
YLR262C	-	81	42.857	YFL005W	SEC4	95	38.140
YLR262C	-	77	38.372	YBR264C	-	84	38.372
YLR262C	-	97	33.475	YKR014C	-	99	33.475