EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
YLR325C (Gene tree)
Gene ID
-
Gene Symbol
RPL38
Alias
-
Full Name
Ribosomal 60S subunit protein L38%3B homologous to mammalian ribosomal protein L38%2C no bacterial homolog
Gene Type
protein_coding
Species
Saccharomyces_cerevisiae
Status
confidence
Strand
Minus strand
Length
237 bases
Position
chrXII:781143-781379
Accession
S000004317
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
YLR325C_mRNARibosomal_L38ePF01781.182.1e-2711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26632259The RNA-binding proteomes from yeast to man harbour conserved enigmRBPsRIC.PAR_CL & yeast2015 Dec 3Beckmann BMDOI: 10.1038/ncomms10127
26595419Conserved mRNA-binding proteomes in eukaryotic organismsmRBPome & yeast2015 Nov 23Matia Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
YLR325C_mRNA-237-YLR325C_mRNA78 (aa)-P49167
Gene Model
Click here to download YLR325C's gene model file
Protein-Protein Interaction (PPI)

Clik here to download YLR325C's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
YLR325CRPL3810050.000ENSG00000172809RPL389950.000Homo_sapiens
YLR325CRPL3810050.000ENSAPOG00000015058rpl389950.000Acanthochromis_polyacanthus
YLR325CRPL389750.000ENSAMEG00000001269-9650.000Ailuropoda_melanoleuca
YLR325CRPL3810038.462ENSAMEG00000018646-9738.462Ailuropoda_melanoleuca
YLR325CRPL388850.725ENSACIG00000009353rpl388850.725Amphilophus_citrinellus
YLR325CRPL3810050.000ENSAOCG00000001669-9950.000Amphiprion_ocellaris
YLR325CRPL3810050.000ENSAPEG00000007742rpl389950.000Amphiprion_percula
YLR325CRPL3810050.000ENSATEG00000004864-9950.000Anabas_testudineus
YLR325CRPL389750.000ENSACAG00000014849RPL389650.000Anolis_carolinensis
YLR325CRPL3810050.000ENSANAG00000030554RPL389950.000Aotus_nancymaae
YLR325CRPL3810048.718ENSANAG00000007502-9948.718Aotus_nancymaae
YLR325CRPL3810050.000ENSACLG00000026657rpl389950.000Astatotilapia_calliptera
YLR325CRPL389150.704ENSAMXG00000017793RPL388950.704Astyanax_mexicanus
YLR325CRPL3810050.000ENSBTAG00000030164RPL389950.000Bos_taurus
YLR325CRPL3810051.282WBGene00004452rpl-389951.282Caenorhabditis_elegans
YLR325CRPL3810050.000ENSCJAG00000043541RPL389950.000Callithrix_jacchus
YLR325CRPL3810041.250ENSCAFG00020026527-9941.250Canis_lupus_dingo
YLR325CRPL389050.000ENSCAFG00020021803-7950.000Canis_lupus_dingo
YLR325CRPL388750.000ENSCAFG00020027279-7950.000Canis_lupus_dingo
YLR325CRPL389750.000ENSCHIG00000026897-9750.000Capra_hircus
YLR325CRPL3810037.179ENSTSYG00000025454-9837.179Carlito_syrichta
YLR325CRPL3810041.026ENSTSYG00000034714-9841.026Carlito_syrichta
YLR325CRPL3810050.000ENSCPOG00000008988RPL389950.000Cavia_porcellus
YLR325CRPL3810039.744ENSCCAG00000024034-6739.744Cebus_capucinus
YLR325CRPL3810050.000ENSCCAG00000021269-9950.000Cebus_capucinus
YLR325CRPL3810050.000ENSCATG00000022828-9950.000Cercocebus_atys
YLR325CRPL3810050.000ENSCATG00000044644RPL389950.000Cercocebus_atys
YLR325CRPL3810050.000ENSCLAG00000003126RPL389950.000Chinchilla_lanigera
YLR325CRPL3810050.000ENSCPBG00000010293RPL389950.000Chrysemys_picta_bellii
YLR325CRPL389652.000ENSCING00000023534-9752.000Ciona_intestinalis
YLR325CRPL3810051.282ENSCSAVG00000004353-9951.282Ciona_savignyi
YLR325CRPL3810050.000ENSCANG00000041844-9950.000Colobus_angolensis_palliatus
YLR325CRPL3810041.026ENSCANG00000030355-9841.026Colobus_angolensis_palliatus
YLR325CRPL389145.070ENSCGRG00001008388-9545.070Cricetulus_griseus_chok1gshd
YLR325CRPL3810052.564ENSCGRG00001023968-9852.564Cricetulus_griseus_chok1gshd
YLR325CRPL389149.296ENSCGRG00001006351-9849.296Cricetulus_griseus_chok1gshd
YLR325CRPL3810050.000ENSCGRG00001019446-9950.000Cricetulus_griseus_chok1gshd
YLR325CRPL389145.070ENSCGRG00000002673-9545.070Cricetulus_griseus_crigri
YLR325CRPL3810052.564ENSCGRG00000010296-9852.564Cricetulus_griseus_crigri
YLR325CRPL389948.052ENSCGRG00000013010-9748.052Cricetulus_griseus_crigri
YLR325CRPL389748.684ENSCGRG00000019703-9948.684Cricetulus_griseus_crigri
YLR325CRPL3810050.000ENSCSEG00000013755rpl389950.000Cynoglossus_semilaevis
YLR325CRPL3810050.000ENSCVAG00000020481rpl389950.000Cyprinodon_variegatus
YLR325CRPL3810050.000ENSDARG00000006413rpl389950.000Danio_rerio
YLR325CRPL389743.421ENSDARG00000111040LO018128.17743.421Danio_rerio
YLR325CRPL3810047.436ENSDNOG00000034870-9047.436Dasypus_novemcinctus
YLR325CRPL389649.333ENSDNOG00000004821-9949.333Dasypus_novemcinctus
YLR325CRPL3810050.000ENSDNOG00000047328RPL389650.000Dasypus_novemcinctus
YLR325CRPL3810042.308ENSDNOG00000040801-9742.308Dasypus_novemcinctus
YLR325CRPL3810050.000ENSDORG00000013146-9950.000Dipodomys_ordii
YLR325CRPL3810046.154ENSDORG00000028829-9946.154Dipodomys_ordii
YLR325CRPL389645.333FBgn0040007RpL389445.333Drosophila_melanogaster
YLR325CRPL388847.826ENSETEG00000001873-10047.826Echinops_telfairi
YLR325CRPL3810043.590ENSEBUG00000005571rpl3810043.590Eptatretus_burgeri
YLR325CRPL3810039.744ENSEASG00005014055-9839.744Equus_asinus_asinus
YLR325CRPL3810050.000ENSEASG00005018952-9950.000Equus_asinus_asinus
YLR325CRPL3810039.744ENSECAG00000037667-9839.744Equus_caballus
YLR325CRPL3810050.000ENSECAG00000018554RPL389950.000Equus_caballus
YLR325CRPL3810050.000ENSELUG00000016533rpl389950.000Esox_lucius
YLR325CRPL3810050.000ENSFCAG00000010851RPL389950.000Felis_catus
YLR325CRPL387946.774ENSFCAG00000013076-7846.774Felis_catus
YLR325CRPL389750.000ENSFALG00000012803RPL389350.000Ficedula_albicollis
YLR325CRPL3810050.000ENSFDAG00000015439RPL389950.000Fukomys_damarensis
YLR325CRPL3810050.000ENSFHEG00000008898rpl389950.000Fundulus_heteroclitus
YLR325CRPL3810050.000ENSGMOG00000005166rpl3810050.000Gadus_morhua
YLR325CRPL3810050.000ENSGALG00000001465RPL389950.000Gallus_gallus
YLR325CRPL3810050.000ENSGAFG00000011413rpl389950.000Gambusia_affinis
YLR325CRPL3810050.000ENSGACG00000003288rpl389050.000Gasterosteus_aculeatus
YLR325CRPL389150.704ENSGAGG00000013893-9450.704Gopherus_agassizii
YLR325CRPL3810050.000ENSGGOG00000000794RPL389950.000Gorilla_gorilla
YLR325CRPL3810050.000ENSHBUG00000008667-9950.000Haplochromis_burtoni
YLR325CRPL3810046.154ENSHGLG00000019788-8346.154Heterocephalus_glaber_female
YLR325CRPL3810050.000ENSHGLG00000008753RPL389950.000Heterocephalus_glaber_female
YLR325CRPL3810046.154ENSHGLG00000012920-9946.154Heterocephalus_glaber_female
YLR325CRPL389746.053ENSHGLG00100020574-9646.053Heterocephalus_glaber_male
YLR325CRPL389750.000ENSHGLG00100012735-8850.000Heterocephalus_glaber_male
YLR325CRPL3810046.154ENSHGLG00100014888-9946.154Heterocephalus_glaber_male
YLR325CRPL3810050.000ENSHCOG00000018583rpl389950.000Hippocampus_comes
YLR325CRPL3810050.000ENSIPUG00000000953rpl389950.000Ictalurus_punctatus
YLR325CRPL3810050.000ENSSTOG00000019394-9950.000Ictidomys_tridecemlineatus
YLR325CRPL3810044.872ENSJJAG00000012837-9944.872Jaculus_jaculus
YLR325CRPL3810050.000ENSJJAG00000005013-9950.000Jaculus_jaculus
YLR325CRPL389548.649ENSJJAG00000010774-9048.649Jaculus_jaculus
YLR325CRPL3810043.590ENSJJAG00000010719-9943.590Jaculus_jaculus
YLR325CRPL3810050.000ENSKMAG00000008360RPL389950.000Kryptolebias_marmoratus
YLR325CRPL3810050.000ENSLBEG00000027693rpl389950.000Labrus_bergylta
YLR325CRPL389650.667ENSLACG00000016913-8750.000Latimeria_chalumnae
YLR325CRPL389250.000ENSLACG00000017820-7750.000Latimeria_chalumnae
YLR325CRPL3810050.000ENSLOCG00000012842rpl389950.000Lepisosteus_oculatus
YLR325CRPL389750.000ENSLAFG00000000355RPL389650.000Loxodonta_africana
YLR325CRPL3810050.000ENSMFAG00000039785-9950.000Macaca_fascicularis
YLR325CRPL3810050.000ENSMFAG00000027351-9950.000Macaca_fascicularis
YLR325CRPL3810050.000ENSMMUG00000029087-9950.000Macaca_mulatta
YLR325CRPL389649.333ENSMMUG00000020582-9949.333Macaca_mulatta
YLR325CRPL3810050.000ENSMNEG00000044832RPL389950.000Macaca_nemestrina
YLR325CRPL3810050.000ENSMAMG00000003588RPL389950.000Mastacembelus_armatus
YLR325CRPL3810050.000ENSMZEG00005005092rpl389950.000Maylandia_zebra
YLR325CRPL3810050.000ENSMGAG00000006476-9650.000Meleagris_gallopavo
YLR325CRPL3810050.000ENSMAUG00000010487-9950.000Mesocricetus_auratus
YLR325CRPL3810050.000ENSMAUG00000021474-9950.000Mesocricetus_auratus
YLR325CRPL3810048.718ENSMAUG00000008765-9948.718Mesocricetus_auratus
YLR325CRPL3810046.154ENSMAUG00000008858-9946.154Mesocricetus_auratus
YLR325CRPL3810050.000ENSMICG00000008493-9950.000Microcebus_murinus
YLR325CRPL3810038.462ENSMICG00000031363-9838.462Microcebus_murinus
YLR325CRPL3810050.000ENSMOCG00000004072-9950.000Microtus_ochrogaster
YLR325CRPL3810050.000ENSMOCG00000001940-9950.000Microtus_ochrogaster
YLR325CRPL388655.224ENSMMOG00000020801rpl388855.224Mola_mola
YLR325CRPL389750.000ENSMODG00000006682-9650.000Monodelphis_domestica
YLR325CRPL3810041.026ENSMODG00000024626-9941.026Monodelphis_domestica
YLR325CRPL3810050.000MGP_CAROLIEiJ_G0017372Rpl389950.000Mus_caroli
YLR325CRPL3810050.000ENSMUSG00000057322Rpl389950.000Mus_musculus
YLR325CRPL3810050.000MGP_PahariEiJ_G0018502Rpl389950.000Mus_pahari
YLR325CRPL3810050.000MGP_SPRETEiJ_G0018218Rpl389950.000Mus_spretus
YLR325CRPL389750.000ENSMPUG00000014257RPL389350.000Mustela_putorius_furo
YLR325CRPL3810050.000ENSMLUG00000027315-9950.000Myotis_lucifugus
YLR325CRPL389750.000ENSMLUG00000022428-9450.000Myotis_lucifugus
YLR325CRPL389750.000ENSMLUG00000014454-9450.000Myotis_lucifugus
YLR325CRPL388842.029ENSNGAG00000014031-9142.029Nannospalax_galili
YLR325CRPL3810050.000ENSNGAG00000014393-9950.000Nannospalax_galili
YLR325CRPL3810042.308ENSNGAG00000018371-9342.308Nannospalax_galili
YLR325CRPL389644.000ENSNGAG00000012525-9444.000Nannospalax_galili
YLR325CRPL389644.000ENSNGAG00000013743-9444.000Nannospalax_galili
YLR325CRPL389150.704ENSNBRG00000007153RPL389750.704Neolamprologus_brichardi
YLR325CRPL3810048.718ENSNLEG00000031161-9948.718Nomascus_leucogenys
YLR325CRPL3810050.000ENSNLEG00000029031-9950.000Nomascus_leucogenys
YLR325CRPL3810048.718ENSNLEG00000029720-9948.718Nomascus_leucogenys
YLR325CRPL389748.684ENSNLEG00000034085-9748.684Nomascus_leucogenys
YLR325CRPL3810050.000ENSNLEG00000027546-9950.000Nomascus_leucogenys
YLR325CRPL388849.275ENSNLEG00000029022-8649.275Nomascus_leucogenys
YLR325CRPL389750.000ENSMEUG00000015915RPL389750.000Notamacropus_eugenii
YLR325CRPL389450.685ENSODEG00000018848-9150.685Octodon_degus
YLR325CRPL3810047.436ENSODEG00000020386-9947.436Octodon_degus
YLR325CRPL389042.857ENSODEG00000018853-9842.857Octodon_degus
YLR325CRPL3810037.179ENSODEG00000002911-9837.179Octodon_degus
YLR325CRPL3810050.000ENSONIG00000007988-9650.000Oreochromis_niloticus
YLR325CRPL3810047.436ENSOCUG00000021402-9947.436Oryctolagus_cuniculus
YLR325CRPL3810050.000ENSOCUG00000027837-9950.000Oryctolagus_cuniculus
YLR325CRPL3810051.282ENSOCUG00000021292-9951.282Oryctolagus_cuniculus
YLR325CRPL3810050.000ENSORLG00000026654-9950.000Oryzias_latipes
YLR325CRPL3810050.000ENSORLG00020002632-9950.000Oryzias_latipes_hni
YLR325CRPL3810050.000ENSORLG00015002112rpl389950.000Oryzias_latipes_hsok
YLR325CRPL3810050.000ENSOMEG00000006744-9950.000Oryzias_melastigma
YLR325CRPL3810050.000ENSOGAG00000027071-9950.000Otolemur_garnettii
YLR325CRPL389750.000ENSOGAG00000000002-9650.000Otolemur_garnettii
YLR325CRPL3810040.506ENSOGAG00000025432-9940.506Otolemur_garnettii
YLR325CRPL389746.053ENSOARG00000004432-9646.053Ovis_aries
YLR325CRPL388844.928ENSPPAG00000027648-9344.928Pan_paniscus
YLR325CRPL3810050.000ENSPPAG00000032390RPL389950.000Pan_paniscus
YLR325CRPL388347.692ENSPTIG00000011700-8147.692Panthera_tigris_altaica
YLR325CRPL3810050.000ENSPTRG00000023234RPL389950.000Pan_troglodytes
YLR325CRPL388844.928ENSPTRG00000051899-9344.928Pan_troglodytes
YLR325CRPL3810050.000ENSPANG00000019874RPL389950.000Papio_anubis
YLR325CRPL3810050.000ENSPKIG00000011849-9950.000Paramormyrops_kingsleyae
YLR325CRPL389750.000ENSPSIG00000009937RPL389650.000Pelodiscus_sinensis
YLR325CRPL389150.704ENSPMGG00000000958RPL387750.704Periophthalmus_magnuspinnatus
YLR325CRPL389050.000ENSPEMG00000020304-9050.000Peromyscus_maniculatus_bairdii
YLR325CRPL389045.714ENSPCIG00000023929-8845.714Phascolarctos_cinereus
YLR325CRPL3810044.872ENSPCIG00000014224-9044.872Phascolarctos_cinereus
YLR325CRPL3810048.718ENSPCIG00000030359-9948.718Phascolarctos_cinereus
YLR325CRPL389250.000ENSPFOG00000014623rpl388650.000Poecilia_formosa
YLR325CRPL3810050.000ENSPLAG00000006127rpl389950.000Poecilia_latipinna
YLR325CRPL3810050.000ENSPMEG00000013851rpl389950.000Poecilia_mexicana
YLR325CRPL388750.000ENSPREG00000009573rpl389250.000Poecilia_reticulata
YLR325CRPL3810050.000ENSPPYG00000008592RPL389950.000Pongo_abelii
YLR325CRPL3810050.000ENSPCAG00000009779-9950.000Procavia_capensis
YLR325CRPL3810050.000ENSPCOG00000021573RPL389950.000Propithecus_coquereli
YLR325CRPL3810050.000ENSPVAG00000017523RPL389950.000Pteropus_vampyrus
YLR325CRPL3810050.000ENSPNYG00000004306rpl389950.000Pundamilia_nyererei
YLR325CRPL3810050.000ENSPNAG00000004669rpl389950.000Pygocentrus_nattereri
YLR325CRPL3810043.590ENSRNOG00000031434AC098064.19743.590Rattus_norvegicus
YLR325CRPL3810050.000ENSRNOG00000030747LOC6904689950.000Rattus_norvegicus
YLR325CRPL3810046.154ENSRNOG00000033484AABR07039377.19746.154Rattus_norvegicus
YLR325CRPL3810050.000ENSRNOG00000048701Rpl389950.000Rattus_norvegicus
YLR325CRPL3810050.000ENSRNOG00000049047Rpl389950.000Rattus_norvegicus
YLR325CRPL3810050.000ENSRNOG00000033686LOC6859639950.000Rattus_norvegicus
YLR325CRPL3810050.000ENSRNOG00000029377LOC6827939950.000Rattus_norvegicus
YLR325CRPL3810048.718ENSRNOG00000032847AABR07060145.19948.718Rattus_norvegicus
YLR325CRPL3810046.154ENSRNOG00000033808AABR07032520.29746.154Rattus_norvegicus
YLR325CRPL3810050.000ENSRBIG00000041938-9950.000Rhinopithecus_bieti
YLR325CRPL3810050.000ENSRBIG00000018435-9950.000Rhinopithecus_bieti
YLR325CRPL3810050.000ENSRROG00000016331-9950.000Rhinopithecus_roxellana
YLR325CRPL3810050.000ENSRROG00000033547-9950.000Rhinopithecus_roxellana
YLR325CRPL3810050.000ENSRROG00000016928-9950.000Rhinopithecus_roxellana
YLR325CRPL3810050.000ENSSBOG00000033282-9950.000Saimiri_boliviensis_boliviensis
YLR325CRPL3810050.000ENSSBOG00000018963-9950.000Saimiri_boliviensis_boliviensis
YLR325CRPL389750.000ENSSHAG00000008646RPL389650.000Sarcophilus_harrisii
YLR325CRPL3810050.000ENSSFOG00015018340rpl389950.000Scleropages_formosus
YLR325CRPL3810050.000ENSSMAG00000006515rpl389950.000Scophthalmus_maximus
YLR325CRPL3810050.000ENSSDUG00000013434rpl389950.000Seriola_dumerili
YLR325CRPL389645.333ENSSLDG00000003586-9645.333Seriola_lalandi_dorsalis
YLR325CRPL389750.000ENSSLDG00000018263rpl389350.000Seriola_lalandi_dorsalis
YLR325CRPL3810050.000ENSSPAG00000003333rpl389950.000Stegastes_partitus
YLR325CRPL3810050.000ENSSSCG00000017239RPL389950.000Sus_scrofa
YLR325CRPL3810050.000ENSTRUG00000017965rpl389950.000Takifugu_rubripes
YLR325CRPL3810050.000ENSTNIG00000014452RPL389650.000Tetraodon_nigroviridis
YLR325CRPL3810042.308ENSTBEG00000007401-9942.308Tupaia_belangeri
YLR325CRPL389050.000ENSTTRG00000007499RPL389150.000Tursiops_truncatus
YLR325CRPL3810043.590ENSUAMG00000007997-9943.590Ursus_americanus
YLR325CRPL389645.333ENSUAMG00000004056-8545.333Ursus_americanus
YLR325CRPL389447.945ENSUAMG00000022397-9147.945Ursus_americanus
YLR325CRPL3810039.744ENSUMAG00000008392-9939.744Ursus_maritimus
YLR325CRPL3810043.590ENSUMAG00000004133-9943.590Ursus_maritimus
YLR325CRPL389250.000ENSUMAG00000007931-9450.000Ursus_maritimus
YLR325CRPL389644.000ENSUMAG00000023706-8544.000Ursus_maritimus
YLR325CRPL389748.684ENSVPAG00000001958RPL389748.684Vicugna_pacos
YLR325CRPL3810042.308ENSVVUG00000023863-9942.308Vulpes_vulpes
YLR325CRPL389750.000ENSVVUG00000009847-7650.000Vulpes_vulpes
YLR325CRPL3810050.000ENSXETG00000025319rpl389950.000Xenopus_tropicalis
YLR325CRPL388850.725ENSXCOG00000004072RPL388550.725Xiphophorus_couchianus
YLR325CRPL3810050.000ENSXMAG00000017217rpl389950.000Xiphophorus_maculatus

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