EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YLR336C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Essential nuclear protein%3B required for biogenesis of the small ribosomal subunit%3B has a possible role in the osmoregulatory glycerol response%3B putative homolog of human NOM1 which is implicated in acute myeloid leukemia
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 2700 bases
Position: chrXII:799697-802396
Accession: S000004328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YLR336C_mRNA	MA3	PF02847.17	8.5e-39	1	1
YLR336C_mRNA	MIF4G	PF02854.19	1.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YLR336C_mRNA	-	2700	-	YLR336C_mRNA	899 (aa)	-	Q06132

Gene Model

Click here to download YLR336C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YLR336C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YLR336C	-	57	32.058	ENSAPLG00000006585	NOM1	78	32.103	Anas_platyrhynchos
YLR336C	-	56	31.898	ENSACAG00000011192	NOM1	50	33.042	Anolis_carolinensis
YLR336C	-	55	30.556	ENSAMXG00000041486	nom1	51	30.388	Astyanax_mexicanus
YLR336C	-	54	30.400	ENSCLAG00000000267	NOM1	65	30.153	Chinchilla_lanigera
YLR336C	-	55	33.466	ENSCPBG00000018215	NOM1	52	33.068	Chrysemys_picta_bellii
YLR336C	-	53	30.579	ENSCGRG00000005405	Nom1	82	30.372	Cricetulus_griseus_crigri
YLR336C	-	54	30.321	ENSDARG00000060027	nom1	74	31.525	Danio_rerio
YLR336C	-	52	31.959	ENSFALG00000006904	NOM1	69	30.874	Ficedula_albicollis
YLR336C	-	56	33.333	ENSGALG00000006437	NOM1	62	32.337	Gallus_gallus
YLR336C	-	60	30.940	ENSGAGG00000014347	NOM1	67	30.887	Gopherus_agassizii
YLR336C	-	55	31.213	ENSMODG00000005177	NOM1	53	31.014	Monodelphis_domestica
YLR336C	-	56	30.885	ENSMALG00000008800	nom1	55	31.749	Monopterus_albus
YLR336C	-	50	31.749	ENSNBRG00000016429	nom1	72	31.221	Neolamprologus_brichardi
YLR336C	-	50	31.624	ENSONIG00000005958	nom1	56	31.489	Oreochromis_niloticus
YLR336C	-	50	30.538	ENSORLG00000010541	nom1	53	30.638	Oryzias_latipes
YLR336C	-	53	30.722	ENSOGAG00000001124	NOM1	72	30.722	Otolemur_garnettii
YLR336C	-	55	33.733	ENSPSIG00000017848	NOM1	75	32.735	Pelodiscus_sinensis
YLR336C	-	55	32.039	ENSPCIG00000027941	NOM1	51	31.845	Phascolarctos_cinereus
YLR336C	-	59	30.769	ENSSHAG00000017998	-	67	32.207	Sarcophilus_harrisii
YLR336C	-	50	30.719	ENSSMAG00000011047	nom1	54	30.652	Scophthalmus_maximus
YLR336C	-	59	30.018	ENSSPAG00000000953	nom1	58	30.275	Stegastes_partitus
YLR336C	-	52	31.368	ENSTGUG00000000702	-	66	30.375	Taeniopygia_guttata
YLR336C	-	55	31.845	ENSXETG00000021611	nom1	84	31.532	Xenopus_tropicalis
YLR336C	-	50	32.026	ENSXMAG00000002451	nom1	60	30.667	Xiphophorus_maculatus