EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YLR347C (Gene tree)
Gene ID: -
Gene Symbol: KAP95
Alias: RSL1
Full Name: Karyopherin beta%3B forms a complex with Srp1p/Kap60p%3B interacts with nucleoporins to mediate nuclear import of NLS-containing cargo proteins via the nuclear pore complex%3B regulates PC biosynthesis%3B GDP-to-GTP exchange factor for Gsp1p
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 2586 bases
Position: chrXII:823828-826413
Accession: S000004339
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YLR347C_mRNA	IBN_N	PF03810.19	8.1e-16	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
20844764	Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiae	MS & yeast	2010 Sep 10	Tsvetanova NG	DOI: 10.1371/journal.pone.0012671

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YLR347C_mRNA	-	2586	-	YLR347C_mRNA	861 (aa)	-	Q06142

Gene Model

Click here to download YLR347C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YLR347C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YLR347C	KAP95	99	33.788	ENSG00000108424	KPNB1	98	47.541	Homo_sapiens
YLR347C	KAP95	99	34.130	ENSAPOG00000020572	kpnb1	99	34.130	Acanthochromis_polyacanthus
YLR347C	KAP95	94	34.405	ENSAMEG00000004613	KPNB1	99	34.524	Ailuropoda_melanoleuca
YLR347C	KAP95	96	34.386	ENSACIG00000023130	kpnb1	99	34.386	Amphilophus_citrinellus
YLR347C	KAP95	99	34.130	ENSAOCG00000007048	kpnb1	99	34.130	Amphiprion_ocellaris
YLR347C	KAP95	99	34.130	ENSAPEG00000008270	kpnb1	99	34.130	Amphiprion_percula
YLR347C	KAP95	99	34.130	ENSATEG00000015139	kpnb1	99	34.130	Anabas_testudineus
YLR347C	KAP95	94	34.245	ENSAPLG00000010177	KPNB1	95	34.245	Anas_platyrhynchos
YLR347C	KAP95	99	33.902	ENSACAG00000007097	KPNB1	99	34.016	Anolis_carolinensis
YLR347C	KAP95	99	33.599	ENSANAG00000024932	-	99	33.599	Aotus_nancymaae
YLR347C	KAP95	99	34.130	ENSACLG00000015070	kpnb1	99	34.130	Astatotilapia_calliptera
YLR347C	KAP95	99	34.699	ENSAMXG00000041903	kpnb1	99	34.699	Astyanax_mexicanus
YLR347C	KAP95	99	33.902	ENSBTAG00000006586	KPNB1	99	34.016	Bos_taurus
YLR347C	KAP95	99	30.995	WBGene00002075	imb-1	97	30.995	Caenorhabditis_elegans
YLR347C	KAP95	99	33.788	ENSCJAG00000007834	KPNB1	99	33.902	Callithrix_jacchus
YLR347C	KAP95	99	33.902	ENSCAFG00000016678	KPNB1	99	34.016	Canis_familiaris
YLR347C	KAP95	99	33.902	ENSCAFG00020023205	KPNB1	99	34.016	Canis_lupus_dingo
YLR347C	KAP95	99	33.902	ENSCHIG00000014896	KPNB1	99	34.016	Capra_hircus
YLR347C	KAP95	94	34.446	ENSTSYG00000014472	KPNB1	96	34.446	Carlito_syrichta
YLR347C	KAP95	94	34.207	ENSCAPG00000014185	KPNB1	99	34.327	Cavia_aperea
YLR347C	KAP95	99	33.675	ENSCPOG00000006566	KPNB1	99	33.788	Cavia_porcellus
YLR347C	KAP95	99	30.995	ENSCCAG00000029263	-	99	30.995	Cebus_capucinus
YLR347C	KAP95	99	33.788	ENSCATG00000037124	KPNB1	99	33.902	Cercocebus_atys
YLR347C	KAP95	99	33.561	ENSCLAG00000017091	KPNB1	99	33.675	Chinchilla_lanigera
YLR347C	KAP95	99	33.788	ENSCSAG00000002605	KPNB1	99	33.902	Chlorocebus_sabaeus
YLR347C	KAP95	62	33.757	ENSCHOG00000010604	KPNB1	62	33.757	Choloepus_hoffmanni
YLR347C	KAP95	96	34.035	ENSCPBG00000027423	KPNB1	93	34.152	Chrysemys_picta_bellii
YLR347C	KAP95	99	32.619	ENSCING00000004639	-	99	32.619	Ciona_intestinalis
YLR347C	KAP95	99	31.271	ENSCSAVG00000008624	-	99	31.271	Ciona_savignyi
YLR347C	KAP95	75	35.435	ENSCANG00000013489	KPNB1	87	35.435	Colobus_angolensis_palliatus
YLR347C	KAP95	99	33.902	ENSCGRG00001016042	Kpnb1	99	34.016	Cricetulus_griseus_chok1gshd
YLR347C	KAP95	94	34.446	ENSCGRG00000013910	Kpnb1	99	34.565	Cricetulus_griseus_crigri
YLR347C	KAP95	96	34.629	ENSCSEG00000007991	kpnb1	99	34.976	Cynoglossus_semilaevis
YLR347C	KAP95	99	34.585	ENSDARG00000104889	kpnb1	99	34.585	Danio_rerio
YLR347C	KAP95	99	33.446	FBgn0262743	Fs(2)Ket	98	33.446	Drosophila_melanogaster
YLR347C	KAP95	98	32.566	ENSEBUG00000013869	kpnb1	98	32.566	Eptatretus_burgeri
YLR347C	KAP95	99	33.902	ENSEASG00005000805	KPNB1	99	34.016	Equus_asinus_asinus
YLR347C	KAP95	99	33.902	ENSECAG00000014560	KPNB1	99	34.016	Equus_caballus
YLR347C	KAP95	83	41.237	ENSEEUG00000005046	KPNB1	87	41.237	Erinaceus_europaeus
YLR347C	KAP95	99	34.130	ENSELUG00000015847	kpnb1	99	34.130	Esox_lucius
YLR347C	KAP95	99	33.902	ENSFCAG00000023994	KPNB1	99	34.016	Felis_catus
YLR347C	KAP95	95	34.120	ENSFDAG00000019923	KPNB1	99	34.446	Fukomys_damarensis
YLR347C	KAP95	99	34.130	ENSFHEG00000020199	kpnb1	99	34.130	Fundulus_heteroclitus
YLR347C	KAP95	94	33.693	ENSGMOG00000011607	kpnb1	99	32.916	Gadus_morhua
YLR347C	KAP95	99	33.561	ENSGALG00000036962	KPNB1	99	33.675	Gallus_gallus
YLR347C	KAP95	99	34.130	ENSGAFG00000000783	kpnb1	99	34.130	Gambusia_affinis
YLR347C	KAP95	99	32.995	ENSGACG00000014765	kpnb1	99	32.995	Gasterosteus_aculeatus
YLR347C	KAP95	93	34.462	ENSGAGG00000023737	KPNB1	90	34.462	Gopherus_agassizii
YLR347C	KAP95	99	33.788	ENSGGOG00000008089	KPNB1	99	33.902	Gorilla_gorilla
YLR347C	KAP95	99	34.130	ENSHBUG00000016826	kpnb1	99	34.130	Haplochromis_burtoni
YLR347C	KAP95	99	33.675	ENSHGLG00000014138	KPNB1	99	33.788	Heterocephalus_glaber_female
YLR347C	KAP95	94	34.207	ENSHGLG00100006572	KPNB1	99	34.327	Heterocephalus_glaber_male
YLR347C	KAP95	99	34.016	ENSHCOG00000002084	kpnb1	99	34.016	Hippocampus_comes
YLR347C	KAP95	98	33.760	ENSIPUG00000012402	kpnb1	95	33.760	Ictalurus_punctatus
YLR347C	KAP95	99	33.788	ENSSTOG00000007896	KPNB1	99	33.902	Ictidomys_tridecemlineatus
YLR347C	KAP95	99	33.788	ENSJJAG00000010909	Kpnb1	99	33.788	Jaculus_jaculus
YLR347C	KAP95	99	34.016	ENSKMAG00000001547	kpnb1	99	34.016	Kryptolebias_marmoratus
YLR347C	KAP95	95	34.958	ENSLBEG00000025794	kpnb1	97	34.404	Labrus_bergylta
YLR347C	KAP95	87	34.845	ENSLACG00000017620	KPNB1	99	34.845	Latimeria_chalumnae
YLR347C	KAP95	99	33.902	ENSLOCG00000013753	kpnb1	99	33.788	Lepisosteus_oculatus
YLR347C	KAP95	99	32.309	ENSLAFG00000001328	KPNB1	99	32.423	Loxodonta_africana
YLR347C	KAP95	94	34.327	ENSMFAG00000030197	KPNB1	99	34.446	Macaca_fascicularis
YLR347C	KAP95	94	34.327	ENSMMUG00000019760	KPNB1	95	34.327	Macaca_mulatta
YLR347C	KAP95	99	33.788	ENSMNEG00000040927	KPNB1	99	33.902	Macaca_nemestrina
YLR347C	KAP95	94	34.327	ENSMLEG00000038185	KPNB1	95	34.327	Mandrillus_leucophaeus
YLR347C	KAP95	99	34.243	ENSMAMG00000011036	kpnb1	99	34.243	Mastacembelus_armatus
YLR347C	KAP95	99	34.130	ENSMZEG00005004564	kpnb1	99	34.130	Maylandia_zebra
YLR347C	KAP95	51	41.071	ENSMGAG00000002770	-	92	41.071	Meleagris_gallopavo
YLR347C	KAP95	99	33.902	ENSMAUG00000006211	Kpnb1	99	34.016	Mesocricetus_auratus
YLR347C	KAP95	99	33.900	ENSMICG00000012059	KPNB1	84	33.900	Microcebus_murinus
YLR347C	KAP95	99	33.902	ENSMOCG00000003683	Kpnb1	99	34.016	Microtus_ochrogaster
YLR347C	KAP95	99	33.902	ENSMODG00000012505	KPNB1	99	33.902	Monodelphis_domestica
YLR347C	KAP95	99	34.243	ENSMALG00000000863	kpnb1	99	34.243	Monopterus_albus
YLR347C	KAP95	93	34.903	MGP_CAROLIEiJ_G0017050	Kpnb1	99	35.024	Mus_caroli
YLR347C	KAP95	99	33.902	ENSMUSG00000001440	Kpnb1	99	34.016	Mus_musculus
YLR347C	KAP95	99	33.864	ENSMPUG00000015220	KPNB1	99	33.864	Mustela_putorius_furo
YLR347C	KAP95	99	32.283	ENSMLUG00000014522	KPNB1	99	32.283	Myotis_lucifugus
YLR347C	KAP95	94	34.327	ENSNGAG00000017610	Kpnb1	99	34.446	Nannospalax_galili
YLR347C	KAP95	99	34.130	ENSNBRG00000019305	kpnb1	99	34.130	Neolamprologus_brichardi
YLR347C	KAP95	99	33.788	ENSNLEG00000001446	KPNB1	99	33.902	Nomascus_leucogenys
YLR347C	KAP95	99	32.537	ENSMEUG00000014284	KPNB1	99	32.537	Notamacropus_eugenii
YLR347C	KAP95	99	33.561	ENSODEG00000017287	KPNB1	99	33.675	Octodon_degus
YLR347C	KAP95	99	34.130	ENSONIG00000009269	kpnb1	99	34.130	Oreochromis_niloticus
YLR347C	KAP95	99	33.788	ENSOCUG00000015425	KPNB1	99	33.902	Oryctolagus_cuniculus
YLR347C	KAP95	99	34.471	ENSORLG00000019936	kpnb1	99	34.471	Oryzias_latipes
YLR347C	KAP95	99	34.471	ENSORLG00020021181	kpnb1	99	34.471	Oryzias_latipes_hni
YLR347C	KAP95	99	34.357	ENSORLG00015012177	kpnb1	99	34.357	Oryzias_latipes_hsok
YLR347C	KAP95	99	34.471	ENSOMEG00000021022	kpnb1	99	34.471	Oryzias_melastigma
YLR347C	KAP95	99	33.902	ENSOGAG00000006153	KPNB1	99	34.016	Otolemur_garnettii
YLR347C	KAP95	94	34.405	ENSOARG00000008469	KPNB1	96	34.524	Ovis_aries
YLR347C	KAP95	99	33.788	ENSPPAG00000028842	KPNB1	99	33.902	Pan_paniscus
YLR347C	KAP95	94	34.446	ENSPPRG00000022879	KPNB1	95	34.446	Panthera_pardus
YLR347C	KAP95	94	34.446	ENSPTIG00000006870	KPNB1	95	34.446	Panthera_tigris_altaica
YLR347C	KAP95	99	33.788	ENSPTRG00000009333	KPNB1	99	33.902	Pan_troglodytes
YLR347C	KAP95	99	33.788	ENSPANG00000022099	KPNB1	99	33.902	Papio_anubis
YLR347C	KAP95	99	33.675	ENSPKIG00000017563	kpnb1	99	34.016	Paramormyrops_kingsleyae
YLR347C	KAP95	94	34.327	ENSPSIG00000009775	KPNB1	99	34.446	Pelodiscus_sinensis
YLR347C	KAP95	99	32.955	ENSPMGG00000001041	kpnb1	92	33.182	Periophthalmus_magnuspinnatus
YLR347C	KAP95	99	33.902	ENSPEMG00000017783	Kpnb1	99	34.016	Peromyscus_maniculatus_bairdii
YLR347C	KAP95	99	32.880	ENSPMAG00000007117	kpnb1	99	33.107	Petromyzon_marinus
YLR347C	KAP95	99	33.902	ENSPCIG00000001034	KPNB1	99	33.902	Phascolarctos_cinereus
YLR347C	KAP95	99	34.130	ENSPFOG00000009014	kpnb1	99	34.130	Poecilia_formosa
YLR347C	KAP95	99	34.130	ENSPLAG00000010922	kpnb1	99	34.130	Poecilia_latipinna
YLR347C	KAP95	99	34.130	ENSPREG00000012268	kpnb1	99	34.130	Poecilia_reticulata
YLR347C	KAP95	99	33.788	ENSPPYG00000025935	KPNB1	99	33.902	Pongo_abelii
YLR347C	KAP95	64	33.670	ENSPCAG00000002526	KPNB1	65	33.670	Procavia_capensis
YLR347C	KAP95	99	33.902	ENSPCOG00000026259	KPNB1	99	34.016	Propithecus_coquereli
YLR347C	KAP95	99	33.902	ENSPVAG00000004910	KPNB1	99	34.016	Pteropus_vampyrus
YLR347C	KAP95	99	32.535	ENSPNYG00000017703	kpnb1	99	32.535	Pundamilia_nyererei
YLR347C	KAP95	98	32.683	ENSPNAG00000024047	kpnb1	97	32.683	Pygocentrus_nattereri
YLR347C	KAP95	99	33.902	ENSRNOG00000009275	Kpnb1	99	34.016	Rattus_norvegicus
YLR347C	KAP95	99	33.675	ENSRBIG00000002254	KPNB1	99	33.788	Rhinopithecus_bieti
YLR347C	KAP95	96	34.035	ENSRROG00000030419	KPNB1	97	34.035	Rhinopithecus_roxellana
YLR347C	KAP95	99	33.787	ENSSBOG00000030025	KPNB1	94	33.787	Saimiri_boliviensis_boliviensis
YLR347C	KAP95	94	34.364	ENSSHAG00000018214	KPNB1	98	34.364	Sarcophilus_harrisii
YLR347C	KAP95	99	34.016	ENSSFOG00015020000	kpnb1	99	34.016	Scleropages_formosus
YLR347C	KAP95	99	34.243	ENSSDUG00000016218	kpnb1	99	34.243	Seriola_dumerili
YLR347C	KAP95	96	34.386	ENSSLDG00000021549	kpnb1	96	34.386	Seriola_lalandi_dorsalis
YLR347C	KAP95	99	33.675	ENSSPUG00000017799	KPNB1	99	33.788	Sphenodon_punctatus
YLR347C	KAP95	99	34.243	ENSSPAG00000019346	kpnb1	99	34.243	Stegastes_partitus
YLR347C	KAP95	99	34.016	ENSSSCG00000017514	KPNB1	99	34.130	Sus_scrofa
YLR347C	KAP95	94	32.977	ENSTGUG00000003387	KPNB1	99	32.977	Taeniopygia_guttata
YLR347C	KAP95	99	34.243	ENSTRUG00000000542	kpnb1	99	34.243	Takifugu_rubripes
YLR347C	KAP95	99	34.016	ENSTNIG00000006494	kpnb1	99	34.016	Tetraodon_nigroviridis
YLR347C	KAP95	94	34.446	ENSTTRG00000004682	KPNB1	99	34.446	Tursiops_truncatus
YLR347C	KAP95	99	33.902	ENSUAMG00000025344	KPNB1	99	33.902	Ursus_americanus
YLR347C	KAP95	94	34.446	ENSUMAG00000016471	KPNB1	95	34.446	Ursus_maritimus
YLR347C	KAP95	87	40.164	ENSVPAG00000003675	KPNB1	86	40.164	Vicugna_pacos
YLR347C	KAP95	99	33.902	ENSVVUG00000003085	KPNB1	99	34.016	Vulpes_vulpes
YLR347C	KAP95	99	34.130	ENSXETG00000014717	kpnb1	99	34.130	Xenopus_tropicalis
YLR347C	KAP95	99	34.130	ENSXMAG00000018792	kpnb1	99	34.130	Xiphophorus_maculatus