EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YLR409C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 2820
Position: chrXII:934414-937233
Accession: S000004401
RBP type: canonical RBP
Summary: Subunit of U3-containing 90S preribosome and SSU processome complexes%3B involved in production of 18S rRNA and assembly of small ribosomal subunit%3B synthetic defect with STI1 Hsp90 cochaperone%3B human homolog linked to glaucoma%3B Small Subunit processome is also known as SSU processome

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YLR409C_mRNA	Utp21	PF04192.12	1.2e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YLR409C_mRNA	-	2820	-	YLR409C_mRNA	939 (aa)	-	Q06078

Gene Model

Click here to download YLR409C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YLR409C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YLR409C	-	94	31.884	ENSG00000134987	WDR36	95	31.884	Homo_sapiens
YLR409C	-	93	31.716	ENSAMEG00000012756	WDR36	89	31.716	Ailuropoda_melanoleuca
YLR409C	-	93	31.173	ENSACIG00000014835	wdr36	94	31.342	Amphilophus_citrinellus
YLR409C	-	93	30.391	ENSAOCG00000005280	wdr36	94	30.235	Amphiprion_ocellaris
YLR409C	-	93	30.357	ENSAPEG00000000335	wdr36	94	30.201	Amphiprion_percula
YLR409C	-	93	30.881	ENSATEG00000023085	wdr36	94	31.166	Anabas_testudineus
YLR409C	-	94	31.884	ENSANAG00000018849	WDR36	95	31.884	Aotus_nancymaae
YLR409C	-	93	31.292	ENSACLG00000007577	wdr36	94	31.685	Astatotilapia_calliptera
YLR409C	-	94	30.100	ENSAMXG00000006706	wdr36	97	30.079	Astyanax_mexicanus
YLR409C	-	89	30.359	ENSBTAG00000005489	WDR36	91	30.476	Bos_taurus
YLR409C	-	93	31.412	ENSBTAG00000053476	WDR36	94	31.412	Bos_taurus
YLR409C	-	94	31.884	ENSCJAG00000016277	WDR36	89	31.884	Callithrix_jacchus
YLR409C	-	93	31.271	ENSCAFG00000007387	WDR36	95	31.271	Canis_familiaris
YLR409C	-	94	31.368	ENSCAFG00020013444	WDR36	95	31.180	Canis_lupus_dingo
YLR409C	-	93	31.638	ENSCHIG00000026685	WDR36	94	31.638	Capra_hircus
YLR409C	-	93	31.757	ENSTSYG00000003163	WDR36	94	31.757	Carlito_syrichta
YLR409C	-	93	31.946	ENSCPOG00000014638	WDR36	94	31.946	Cavia_porcellus
YLR409C	-	94	32.103	ENSCCAG00000035644	WDR36	95	32.103	Cebus_capucinus
YLR409C	-	94	31.884	ENSCATG00000035085	WDR36	92	31.884	Cercocebus_atys
YLR409C	-	93	31.721	ENSCLAG00000005745	WDR36	93	31.721	Chinchilla_lanigera
YLR409C	-	94	31.884	ENSCSAG00000014980	WDR36	92	31.884	Chlorocebus_sabaeus
YLR409C	-	71	32.477	ENSCHOG00000011273	WDR36	71	32.477	Choloepus_hoffmanni
YLR409C	-	94	30.820	ENSCPBG00000013928	WDR36	98	31.092	Chrysemys_picta_bellii
YLR409C	-	94	32.151	ENSCANG00000034270	WDR36	92	32.151	Colobus_angolensis_palliatus
YLR409C	-	94	32.040	ENSCGRG00001012983	Wdr36	96	32.135	Cricetulus_griseus_chok1gshd
YLR409C	-	88	31.429	ENSCGRG00000013589	Wdr36	94	31.673	Cricetulus_griseus_crigri
YLR409C	-	93	31.027	ENSCVAG00000022841	wdr36	94	31.229	Cyprinodon_variegatus
YLR409C	-	94	30.425	ENSDARG00000004774	wdr36	94	30.425	Danio_rerio
YLR409C	-	93	32.316	ENSDNOG00000004563	WDR36	94	32.316	Dasypus_novemcinctus
YLR409C	-	97	31.398	ENSDORG00000005468	-	97	31.398	Dipodomys_ordii
YLR409C	-	79	32.267	ENSETEG00000016513	WDR36	77	32.267	Echinops_telfairi
YLR409C	-	93	32.369	ENSEASG00005015708	WDR36	94	32.369	Equus_asinus_asinus
YLR409C	-	93	32.481	ENSECAG00000017001	WDR36	94	32.481	Equus_caballus
YLR409C	-	95	31.538	ENSEEUG00000008078	WDR36	93	31.270	Erinaceus_europaeus
YLR409C	-	93	31.011	ENSELUG00000003875	wdr36	95	30.984	Esox_lucius
YLR409C	-	92	31.937	ENSFCAG00000022572	WDR36	94	31.987	Felis_catus
YLR409C	-	93	31.982	ENSFDAG00000009199	WDR36	93	31.982	Fukomys_damarensis
YLR409C	-	63	36.264	ENSFHEG00000006019	wdr36	81	36.264	Fundulus_heteroclitus
YLR409C	-	54	33.399	ENSGMOG00000009386	wdr36	78	33.399	Gadus_morhua
YLR409C	-	93	31.342	ENSGACG00000015461	wdr36	94	31.342	Gasterosteus_aculeatus
YLR409C	-	93	30.580	ENSGAGG00000016861	WDR36	93	30.701	Gopherus_agassizii
YLR409C	-	94	31.884	ENSGGOG00000026914	WDR36	89	31.884	Gorilla_gorilla
YLR409C	-	93	30.033	ENSHBUG00000010472	wdr36	98	30.715	Haplochromis_burtoni
YLR409C	-	93	31.757	ENSHGLG00000008804	WDR36	93	31.757	Heterocephalus_glaber_female
YLR409C	-	93	31.757	ENSHGLG00100004891	WDR36	93	31.757	Heterocephalus_glaber_male
YLR409C	-	94	31.215	ENSIPUG00000017751	wdr36	95	31.215	Ictalurus_punctatus
YLR409C	-	94	31.828	ENSSTOG00000014672	WDR36	84	31.828	Ictidomys_tridecemlineatus
YLR409C	-	93	31.159	ENSJJAG00000023683	-	96	31.159	Jaculus_jaculus
YLR409C	-	70	32.244	ENSKMAG00000015303	wdr36	93	32.244	Kryptolebias_marmoratus
YLR409C	-	93	31.096	ENSLBEG00000020493	wdr36	94	31.278	Labrus_bergylta
YLR409C	-	94	30.488	ENSLACG00000009326	WDR36	95	30.488	Latimeria_chalumnae
YLR409C	-	93	32.207	ENSLAFG00000009957	WDR36	93	32.320	Loxodonta_africana
YLR409C	-	94	31.884	ENSMFAG00000001782	WDR36	92	31.884	Macaca_fascicularis
YLR409C	-	94	31.773	ENSMMUG00000004670	WDR36	95	31.773	Macaca_mulatta
YLR409C	-	94	31.884	ENSMNEG00000037202	WDR36	92	31.884	Macaca_nemestrina
YLR409C	-	94	31.884	ENSMLEG00000041259	WDR36	95	31.884	Mandrillus_leucophaeus
YLR409C	-	92	30.743	ENSMAMG00000012989	wdr36	99	31.081	Mastacembelus_armatus
YLR409C	-	93	31.327	ENSMZEG00005023368	wdr36	94	31.798	Maylandia_zebra
YLR409C	-	79	33.333	ENSMAUG00000018806	Wdr36	92	33.333	Mesocricetus_auratus
YLR409C	-	94	32.000	ENSMICG00000000645	WDR36	90	32.000	Microcebus_murinus
YLR409C	-	94	31.486	ENSMOCG00000012782	Wdr36	96	31.327	Microtus_ochrogaster
YLR409C	-	77	32.038	ENSMMOG00000021162	wdr36	89	30.322	Mola_mola
YLR409C	-	94	30.812	ENSMODG00000015652	WDR36	94	30.812	Monodelphis_domestica
YLR409C	-	94	31.451	MGP_CAROLIEiJ_G0022079	Wdr36	96	31.229	Mus_caroli
YLR409C	-	94	31.672	ENSMUSG00000038299	Wdr36	96	31.451	Mus_musculus
YLR409C	-	93	31.874	MGP_PahariEiJ_G0018813	Wdr36	95	31.874	Mus_pahari
YLR409C	-	94	31.451	MGP_SPRETEiJ_G0022991	Wdr36	96	31.451	Mus_spretus
YLR409C	-	93	31.732	ENSMPUG00000012646	WDR36	94	31.732	Mustela_putorius_furo
YLR409C	-	95	32.088	ENSMLUG00000002381	WDR36	95	32.088	Myotis_lucifugus
YLR409C	-	93	31.638	ENSNGAG00000015392	Wdr36	93	31.638	Nannospalax_galili
YLR409C	-	93	31.305	ENSNBRG00000005131	wdr36	96	31.602	Neolamprologus_brichardi
YLR409C	-	94	32.107	ENSNLEG00000011395	WDR36	95	31.884	Nomascus_leucogenys
YLR409C	-	52	30.045	ENSOPRG00000001327	-	60	30.045	Ochotona_princeps
YLR409C	-	93	32.095	ENSODEG00000002759	WDR36	93	32.095	Octodon_degus
YLR409C	-	93	31.626	ENSONIG00000012551	wdr36	94	32.135	Oreochromis_niloticus
YLR409C	-	94	30.435	ENSOANG00000015157	WDR36	94	30.435	Ornithorhynchus_anatinus
YLR409C	-	93	31.869	ENSOCUG00000003129	WDR36	94	31.869	Oryctolagus_cuniculus
YLR409C	-	93	30.478	ENSORLG00000019652	wdr36	94	30.527	Oryzias_latipes
YLR409C	-	93	30.357	ENSORLG00020018961	wdr36	94	30.405	Oryzias_latipes_hni
YLR409C	-	95	30.205	ENSORLG00015007362	wdr36	97	30.250	Oryzias_latipes_hsok
YLR409C	-	93	31.910	ENSOGAG00000000608	WDR36	93	31.910	Otolemur_garnettii
YLR409C	-	93	31.638	ENSOARG00000018968	WDR36	93	31.057	Ovis_aries
YLR409C	-	94	31.996	ENSPPAG00000023560	WDR36	95	31.996	Pan_paniscus
YLR409C	-	92	32.009	ENSPPRG00000005832	WDR36	94	32.058	Panthera_pardus
YLR409C	-	92	31.896	ENSPTIG00000009401	WDR36	94	31.946	Panthera_tigris_altaica
YLR409C	-	94	31.996	ENSPTRG00000017128	WDR36	89	31.996	Pan_troglodytes
YLR409C	-	94	31.884	ENSPANG00000004679	WDR36	92	31.884	Papio_anubis
YLR409C	-	89	31.062	ENSPKIG00000025589	wdr36	96	31.192	Paramormyrops_kingsleyae
YLR409C	-	94	30.168	ENSPSIG00000011688	WDR36	95	30.279	Pelodiscus_sinensis
YLR409C	-	93	31.342	ENSPMGG00000006948	wdr36	94	31.342	Periophthalmus_magnuspinnatus
YLR409C	-	94	31.783	ENSPEMG00000017285	Wdr36	95	31.783	Peromyscus_maniculatus_bairdii
YLR409C	-	93	31.243	ENSPCIG00000004387	WDR36	94	31.368	Phascolarctos_cinereus
YLR409C	-	93	30.950	ENSPFOG00000001899	wdr36	94	31.229	Poecilia_formosa
YLR409C	-	93	31.069	ENSPLAG00000008165	wdr36	98	31.348	Poecilia_latipinna
YLR409C	-	93	30.726	ENSPMEG00000014702	wdr36	94	31.003	Poecilia_mexicana
YLR409C	-	83	30.692	ENSPREG00000017144	wdr36	93	31.004	Poecilia_reticulata
YLR409C	-	94	31.773	ENSPPYG00000015679	WDR36	95	31.773	Pongo_abelii
YLR409C	-	60	42.512	ENSPCAG00000015799	WDR36	58	42.512	Procavia_capensis
YLR409C	-	83	32.131	ENSPCOG00000020442	WDR36	82	32.131	Propithecus_coquereli
YLR409C	-	94	31.672	ENSPVAG00000001900	WDR36	90	31.672	Pteropus_vampyrus
YLR409C	-	93	31.069	ENSPNYG00000011708	wdr36	94	31.461	Pundamilia_nyererei
YLR409C	-	94	31.375	ENSRNOG00000027355	Wdr36	96	31.375	Rattus_norvegicus
YLR409C	-	94	31.347	ENSRBIG00000040788	WDR36	92	31.678	Rhinopithecus_bieti
YLR409C	-	78	32.267	ENSRROG00000042369	WDR36	93	32.267	Rhinopithecus_roxellana
YLR409C	-	94	31.884	ENSSBOG00000031972	WDR36	89	31.884	Saimiri_boliviensis_boliviensis
YLR409C	-	87	30.404	ENSSHAG00000003687	WDR36	94	30.523	Sarcophilus_harrisii
YLR409C	-	94	30.199	ENSSFOG00015011783	wdr36	95	30.357	Scleropages_formosus
YLR409C	-	92	30.068	ENSSMAG00000008869	wdr36	94	30.891	Scophthalmus_maximus
YLR409C	-	86	32.348	ENSSARG00000014158	WDR36	86	32.348	Sorex_araneus
YLR409C	-	94	30.667	ENSSPUG00000015643	WDR36	95	30.667	Sphenodon_punctatus
YLR409C	-	93	30.692	ENSSPAG00000011530	wdr36	94	30.976	Stegastes_partitus
YLR409C	-	93	32.095	ENSSSCG00000014199	WDR36	94	32.095	Sus_scrofa
YLR409C	-	94	32.075	ENSTRUG00000008438	wdr36	94	32.251	Takifugu_rubripes
YLR409C	-	93	30.856	ENSTNIG00000013251	wdr36	94	30.984	Tetraodon_nigroviridis
YLR409C	-	73	32.761	ENSTBEG00000013126	WDR36	79	32.761	Tupaia_belangeri
YLR409C	-	93	31.046	ENSTTRG00000000590	WDR36	89	31.046	Tursiops_truncatus
YLR409C	-	93	31.834	ENSUAMG00000016133	WDR36	94	31.716	Ursus_americanus
YLR409C	-	93	31.834	ENSUMAG00000015661	WDR36	94	31.716	Ursus_maritimus
YLR409C	-	93	31.306	ENSVPAG00000011242	WDR36	88	31.306	Vicugna_pacos
YLR409C	-	93	30.743	ENSVVUG00000012684	WDR36	94	31.181	Vulpes_vulpes
YLR409C	-	94	31.153	ENSXETG00000011004	wdr36	94	31.340	Xenopus_tropicalis
YLR409C	-	67	31.761	ENSXCOG00000000434	wdr36	81	31.761	Xiphophorus_couchianus
YLR409C	-	93	30.838	ENSXMAG00000005092	wdr36	94	31.116	Xiphophorus_maculatus