EuRBPDB

Description

Ensembl ID: YLR430W (Gene tree)
Gene ID: -
Gene Symbol: SEN1
Alias: CIK3|NRD2
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 6696
Position: chrXII:993434-1000129
Accession: S000004422
RBP type: canonical RBP
Summary: ATP-dependent 5' to 3' RNA/DNA and DNA helicase%3B subunit of the exosome-associated Nrd1p complex that mediates 3' end formation of snRNAs%2C snoRNAs%2C CUTs and some mRNAs%3B helicase-independent role in transcription-coupled repair%3B coordinates replication with transcription%2C associating with moving forks and preventing errors that occur when forks encounter transcribed regions%3B homolog of Senataxin%2C implicated in Ataxia-Oculomotor Apraxia 2 and a dominant form of juvenile ALS

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YLR430W_mRNA	SEN1_N	PF12726.7	1.5e-207	1	1
YLR430W_mRNA	UvrD-helicase	PF00580.21	9.6e-07	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YLR430W_mRNA	-	6696	-	YLR430W_mRNA	2231 (aa)	-	Q00416

Gene Model

Protein-Protein Interaction (PPI)