EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: YML080W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Dihydrouridine synthase%3B member of a widespread family of conserved proteins including Smm1p%2C Dus3p%2C and Dus4p%3B modifies pre-tRNA(Phe) at U17
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1272 bases
Position: chrXIII:108806-110077
Accession: S000004545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YML080W_mRNA	Dus	PF01207.17	4.9e-95	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
21124907	A screen for RNA binding proteins in yeast indicates dual functions for many enzymes	ProtoArray & yeast	2010 Nov 11	DOI: 10.1371/journal.pone.0015499

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YML080W_mRNA	-	1272	-	YML080W_mRNA	423 (aa)	-	P53759

Gene Model

Click here to download YML080W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YML080W's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YML080W	-	55	31.197	YLR405W	-	62	31.197

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YML080W	-	87	44.086	ENSG00000169718	DUS1L	100	52.439	Homo_sapiens
YML080W	-	83	37.784	ENSAPOG00000007899	dus1l	77	37.784	Acanthochromis_polyacanthus
YML080W	-	90	43.797	ENSAMEG00000017313	DUS1L	76	43.797	Ailuropoda_melanoleuca
YML080W	-	72	47.896	ENSACIG00000013505	dus1l	61	47.588	Amphilophus_citrinellus
YML080W	-	87	43.968	ENSAOCG00000023872	dus1l	69	43.968	Amphiprion_ocellaris
YML080W	-	87	43.968	ENSAPEG00000021394	dus1l	69	43.968	Amphiprion_percula
YML080W	-	95	42.469	ENSATEG00000009144	dus1l	79	42.469	Anabas_testudineus
YML080W	-	91	41.206	ENSAPLG00000001965	DUS1L	75	41.206	Anas_platyrhynchos
YML080W	-	93	41.966	ENSACAG00000009945	DUS1L	83	41.966	Anolis_carolinensis
YML080W	-	87	44.355	ENSANAG00000030037	DUS1L	73	44.355	Aotus_nancymaae
YML080W	-	95	42.857	ENSACLG00000004307	dus1l	77	42.857	Astatotilapia_calliptera
YML080W	-	87	44.205	ENSAMXG00000031331	dus1l	71	46.084	Astyanax_mexicanus
YML080W	-	93	44.118	ENSBTAG00000047760	DUS1L	79	44.118	Bos_taurus
YML080W	-	84	40.872	WBGene00009452	F36A2.2	65	40.872	Caenorhabditis_elegans
YML080W	-	87	44.086	ENSCJAG00000018104	-	87	48.254	Callithrix_jacchus
YML080W	-	85	42.061	ENSCJAG00000011502	-	70	42.061	Callithrix_jacchus
YML080W	-	90	44.388	ENSCAFG00000005952	DUS1L	76	44.388	Canis_familiaris
YML080W	-	90	44.388	ENSCAFG00020010251	DUS1L	82	44.388	Canis_lupus_dingo
YML080W	-	93	44.363	ENSCHIG00000019382	DUS1L	74	44.363	Capra_hircus
YML080W	-	87	43.935	ENSTSYG00000010792	DUS1L	72	43.935	Carlito_syrichta
YML080W	-	90	42.559	ENSCPOG00000030880	DUS1L	76	42.559	Cavia_porcellus
YML080W	-	87	44.086	ENSCCAG00000032592	DUS1L	72	44.086	Cebus_capucinus
YML080W	-	87	43.817	ENSCATG00000039553	DUS1L	72	43.817	Cercocebus_atys
YML080W	-	97	40.976	ENSCLAG00000014832	DUS1L	80	40.976	Chinchilla_lanigera
YML080W	-	87	43.817	ENSCSAG00000002157	DUS1L	72	43.817	Chlorocebus_sabaeus
YML080W	-	96	42.271	ENSCPBG00000011543	DUS1L	78	42.271	Chrysemys_picta_bellii
YML080W	-	87	47.439	ENSCING00000007479	-	75	47.439	Ciona_intestinalis
YML080W	-	57	52.500	ENSCING00000022313	-	98	52.500	Ciona_intestinalis
YML080W	-	87	43.850	ENSCSAVG00000001475	-	78	43.850	Ciona_savignyi
YML080W	-	87	40.054	ENSCSAVG00000000712	-	89	40.054	Ciona_savignyi
YML080W	-	87	44.355	ENSCANG00000040274	DUS1L	72	44.355	Colobus_angolensis_palliatus
YML080W	-	87	43.666	ENSCGRG00001021324	Dus1l	74	43.666	Cricetulus_griseus_chok1gshd
YML080W	-	87	43.666	ENSCGRG00000015480	Dus1l	72	43.666	Cricetulus_griseus_crigri
YML080W	-	95	41.769	ENSCSEG00000013675	dus1l	51	41.769	Cynoglossus_semilaevis
YML080W	-	72	49.186	ENSCVAG00000010146	dus1l	75	49.186	Cyprinodon_variegatus
YML080W	-	90	44.503	ENSDARG00000089260	dus1l	71	44.503	Danio_rerio
YML080W	-	55	53.814	ENSDNOG00000040876	-	97	53.975	Dasypus_novemcinctus
YML080W	-	69	40.614	ENSDORG00000028758	Dus1l	71	39.739	Dipodomys_ordii
YML080W	-	87	45.968	FBgn0031238	CG3645	68	46.237	Drosophila_melanogaster
YML080W	-	87	44.324	ENSETEG00000013903	DUS1L	71	44.324	Echinops_telfairi
YML080W	-	85	39.276	ENSEBUG00000001370	dus1l	86	39.276	Eptatretus_burgeri
YML080W	-	90	43.878	ENSEASG00005005886	DUS1L	76	43.878	Equus_asinus_asinus
YML080W	-	90	43.878	ENSECAG00000017904	DUS1L	77	43.878	Equus_caballus
YML080W	-	53	30.165	ENSEEUG00000014275	-	78	30.165	Erinaceus_europaeus
YML080W	-	88	43.467	ENSELUG00000011137	dus1l	84	43.467	Esox_lucius
YML080W	-	93	43.564	ENSFCAG00000011683	DUS1L	76	43.564	Felis_catus
YML080W	-	96	40.811	ENSFALG00000011707	DUS1L	79	40.811	Ficedula_albicollis
YML080W	-	87	44.562	ENSFDAG00000007140	DUS1L	73	44.562	Fukomys_damarensis
YML080W	-	90	44.216	ENSFHEG00000002025	dus1l	74	45.187	Fundulus_heteroclitus
YML080W	-	87	45.238	ENSGMOG00000008030	dus1l	79	45.238	Gadus_morhua
YML080W	-	96	41.007	ENSGALG00000034115	DUS1L	79	41.007	Gallus_gallus
YML080W	-	87	45.308	ENSGAFG00000006321	dus1l	69	45.308	Gambusia_affinis
YML080W	-	93	42.105	ENSGACG00000005403	dus1l	83	42.462	Gasterosteus_aculeatus
YML080W	-	91	42.000	ENSGAGG00000016657	DUS1L	76	42.000	Gopherus_agassizii
YML080W	-	87	44.355	ENSGGOG00000011636	DUS1L	72	44.355	Gorilla_gorilla
YML080W	-	95	42.365	ENSHBUG00000009512	dus1l	77	42.365	Haplochromis_burtoni
YML080W	-	87	43.127	ENSHGLG00000010316	DUS1L	73	43.085	Heterocephalus_glaber_female
YML080W	-	87	43.127	ENSHGLG00100009264	DUS1L	72	43.127	Heterocephalus_glaber_male
YML080W	-	90	42.119	ENSHCOG00000007433	dus1l	72	42.119	Hippocampus_comes
YML080W	-	88	46.791	ENSIPUG00000014839	dus1l	81	45.122	Ictalurus_punctatus
YML080W	-	87	42.857	ENSSTOG00000003787	DUS1L	72	42.857	Ictidomys_tridecemlineatus
YML080W	-	88	43.316	ENSJJAG00000020218	Dus1l	74	43.316	Jaculus_jaculus
YML080W	-	88	44.385	ENSKMAG00000014147	dus1l	70	44.385	Kryptolebias_marmoratus
YML080W	-	87	44.772	ENSLBEG00000021685	dus1l	70	44.772	Labrus_bergylta
YML080W	-	96	42.054	ENSLACG00000011348	DUS1L	78	42.054	Latimeria_chalumnae
YML080W	-	87	45.822	ENSLOCG00000012342	dus1l	70	45.822	Lepisosteus_oculatus
YML080W	-	87	44.652	ENSLAFG00000003230	DUS1L	72	44.652	Loxodonta_africana
YML080W	-	87	43.817	ENSMFAG00000001187	DUS1L	72	43.817	Macaca_fascicularis
YML080W	-	87	43.817	ENSMMUG00000012803	DUS1L	75	55.941	Macaca_mulatta
YML080W	-	87	43.817	ENSMNEG00000010573	DUS1L	72	43.817	Macaca_nemestrina
YML080W	-	56	54.237	ENSMLEG00000035767	DUS1L	59	53.498	Mandrillus_leucophaeus
YML080W	-	98	42.482	ENSMAMG00000001703	dus1l	77	42.857	Mastacembelus_armatus
YML080W	-	95	42.857	ENSMZEG00005023163	dus1l	77	42.857	Maylandia_zebra
YML080W	-	92	40.704	ENSMGAG00000005146	DUS1L	75	40.704	Meleagris_gallopavo
YML080W	-	87	43.935	ENSMAUG00000015152	Dus1l	72	43.935	Mesocricetus_auratus
YML080W	-	87	43.164	ENSMICG00000010159	DUS1L	72	43.164	Microcebus_murinus
YML080W	-	87	42.049	ENSMOCG00000018377	Dus1l	75	42.049	Microtus_ochrogaster
YML080W	-	95	41.769	ENSMMOG00000005580	dus1l	82	41.769	Mola_mola
YML080W	-	89	44.619	ENSMODG00000003351	DUS1L	71	44.619	Monodelphis_domestica
YML080W	-	96	42.892	ENSMALG00000002013	dus1l	77	42.892	Monopterus_albus
YML080W	-	87	43.733	MGP_CAROLIEiJ_G0017546	Dus1l	99	56.970	Mus_caroli
YML080W	-	87	43.733	ENSMUSG00000025155	Dus1l	99	56.970	Mus_musculus
YML080W	-	87	43.467	MGP_PahariEiJ_G0018673	Dus1l	99	56.364	Mus_pahari
YML080W	-	87	43.733	MGP_SPRETEiJ_G0018390	Dus1l	99	56.970	Mus_spretus
YML080W	-	70	41.806	ENSMLUG00000016577	DUS1L	67	41.806	Myotis_lucifugus
YML080W	-	87	42.513	ENSNGAG00000018676	Dus1l	72	42.513	Nannospalax_galili
YML080W	-	87	39.785	ENSNLEG00000014021	DUS1L	70	39.785	Nomascus_leucogenys
YML080W	-	87	40.107	ENSMEUG00000004630	DUS1L	72	40.107	Notamacropus_eugenii
YML080W	-	87	43.666	ENSODEG00000007777	DUS1L	75	43.666	Octodon_degus
YML080W	-	93	44.557	ENSONIG00000006234	dus1l	75	44.557	Oreochromis_niloticus
YML080W	-	88	44.297	ENSORLG00000017223	dus1l	73	47.531	Oryzias_latipes
YML080W	-	55	54.430	ENSORLG00020018056	dus1l	79	54.430	Oryzias_latipes_hni
YML080W	-	87	45.040	ENSORLG00015010473	dus1l	66	45.040	Oryzias_latipes_hsok
YML080W	-	89	45.119	ENSOMEG00000012607	dus1l	70	45.119	Oryzias_melastigma
YML080W	-	87	43.085	ENSOGAG00000005494	DUS1L	73	43.085	Otolemur_garnettii
YML080W	-	93	44.363	ENSOARG00000017277	DUS1L	79	44.363	Ovis_aries
YML080W	-	87	44.086	ENSPPAG00000027029	DUS1L	72	44.086	Pan_paniscus
YML080W	-	90	44.388	ENSPPRG00000012135	DUS1L	78	44.388	Panthera_pardus
YML080W	-	55	56.466	ENSPTIG00000021001	DUS1L	60	56.466	Panthera_tigris_altaica
YML080W	-	87	44.086	ENSPTRG00000039913	-	72	44.086	Pan_troglodytes
YML080W	-	87	43.817	ENSPANG00000018945	DUS1L	72	43.817	Papio_anubis
YML080W	-	97	41.889	ENSPKIG00000009901	dus1l	84	41.889	Paramormyrops_kingsleyae
YML080W	-	91	40.704	ENSPSIG00000009963	DUS1L	76	40.351	Pelodiscus_sinensis
YML080W	-	93	42.611	ENSPMGG00000005015	dus1l	76	42.611	Periophthalmus_magnuspinnatus
YML080W	-	87	43.666	ENSPEMG00000011610	Dus1l	78	43.666	Peromyscus_maniculatus_bairdii
YML080W	-	93	44.000	ENSPCIG00000023887	DUS1L	75	44.000	Phascolarctos_cinereus
YML080W	-	87	45.040	ENSPFOG00000019577	dus1l	69	45.040	Poecilia_formosa
YML080W	-	87	45.040	ENSPLAG00000021350	dus1l	69	45.040	Poecilia_latipinna
YML080W	-	87	45.040	ENSPMEG00000000698	dus1l	69	45.040	Poecilia_mexicana
YML080W	-	87	45.040	ENSPREG00000007263	dus1l	69	45.040	Poecilia_reticulata
YML080W	-	87	44.624	ENSPPYG00000008767	DUS1L	72	44.624	Pongo_abelii
YML080W	-	87	43.968	ENSPCOG00000021919	DUS1L	72	43.968	Propithecus_coquereli
YML080W	-	93	43.842	ENSPVAG00000002524	DUS1L	79	43.842	Pteropus_vampyrus
YML080W	-	95	43.103	ENSPNYG00000022627	dus1l	85	43.103	Pundamilia_nyererei
YML080W	-	97	42.615	ENSPNAG00000014263	dus1l	83	40.436	Pygocentrus_nattereri
YML080W	-	87	43.164	ENSRNOG00000047905	Dus1l	78	43.164	Rattus_norvegicus
YML080W	-	87	44.086	ENSRBIG00000034870	DUS1L	72	44.086	Rhinopithecus_bieti
YML080W	-	87	44.086	ENSRROG00000036079	DUS1L	72	44.086	Rhinopithecus_roxellana
YML080W	-	87	44.892	ENSSBOG00000021620	DUS1L	74	44.892	Saimiri_boliviensis_boliviensis
YML080W	-	89	44.619	ENSSHAG00000005402	DUS1L	71	44.619	Sarcophilus_harrisii
YML080W	-	88	45.161	ENSSFOG00015023351	dus1l	78	45.161	Scleropages_formosus
YML080W	-	88	43.850	ENSSMAG00000016562	dus1l	70	43.850	Scophthalmus_maximus
YML080W	-	88	44.385	ENSSDUG00000023398	dus1l	70	44.385	Seriola_dumerili
YML080W	-	88	44.385	ENSSLDG00000011548	dus1l	70	44.385	Seriola_lalandi_dorsalis
YML080W	-	87	44.415	ENSSPUG00000006796	DUS1L	67	44.415	Sphenodon_punctatus
YML080W	-	96	35.351	ENSSPAG00000008618	dus1l	79	35.351	Stegastes_partitus
YML080W	-	90	43.878	ENSSSCG00000040352	DUS1L	76	43.878	Sus_scrofa
YML080W	-	96	41.050	ENSTGUG00000003700	DUS1L	79	41.050	Taeniopygia_guttata
YML080W	-	90	42.078	ENSTRUG00000011243	dus1l	77	42.078	Takifugu_rubripes
YML080W	-	88	43.316	ENSTNIG00000013994	dus1l	77	43.316	Tetraodon_nigroviridis
YML080W	-	87	45.576	ENSTTRG00000001583	DUS1L	72	45.576	Tursiops_truncatus
YML080W	-	90	43.878	ENSUAMG00000022847	DUS1L	76	43.878	Ursus_americanus
YML080W	-	93	42.647	ENSUMAG00000016749	DUS1L	74	42.105	Ursus_maritimus
YML080W	-	90	44.388	ENSVVUG00000001205	DUS1L	85	40.092	Vulpes_vulpes
YML080W	-	83	45.352	ENSXETG00000019654	dus1l	69	45.352	Xenopus_tropicalis
YML080W	-	87	45.040	ENSXCOG00000009784	dus1l	71	45.040	Xiphophorus_couchianus
YML080W	-	87	44.772	ENSXMAG00000005147	dus1l	69	44.772	Xiphophorus_maculatus