EuRBPDB

Description

Ensembl ID: YML117W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Putative RNA-binding protein%3B associates with mRNAs encoding cell wall proteins in high-throughput studies%3B deletion mutants display increased sensitivity to some cell wall disrupting agents%3B expression negatively regulated by cAMP
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 3405 bases
Position: chrXIII:34243-37647
Accession: S000004585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YML117W_mRNA	RRM	PF10378.9	7.2e-22	1	1
YML117W_mRNA	Nab6_mRNP_bdg	PF10567.9	1.7e-129	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl.PAR_CL & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468
20844764	Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiae	MS & yeast	2010 Sep 10	Tsvetanova NG	DOI: 10.1371/journal.pone.0012671

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YML117W_mRNA	-	3405	-	YML117W_mRNA	1134 (aa)	-	Q03735

Gene Model

Protein-Protein Interaction (PPI)