EuRBPDB

Description

Ensembl ID: YMR039C (Gene tree)
Gene ID: -
Gene Symbol: SUB1
Alias: TSP1
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 879
Position: chrXIII:348644-349522
Accession: S000004642
RBP type: canonical RBP
Summary: Transcriptional regulator%3B facilitates elongation through factors that modify RNAP II%3B role in peroxide resistance involving Rad2p%3B role in nonhomologous end-joining (NHEJ) of ds breaks in plasmid DNA%2C but not chromosomal DNA%3B role in the hyperosmotic stress response through polymerase recruitment at RNAP II and RNAP III genes%3B negatively regulates sporulation%3B protein abundance increases in response to DNA replication stress%3B functionally complemented by human SUB1 (PC4)

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YMR039C_mRNA	PC4	PF02229.16	2e-22	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
21124907	A screen for RNA binding proteins in yeast indicates dual functions for many enzymes	ProtoArray & yeast	2010 Nov 11	DOI: 10.1371/journal.pone.0015499

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YMR039C_mRNA	-	879	-	YMR039C_mRNA	292 (aa)	-	P54000

Gene Model

Protein-Protein Interaction (PPI)