EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YMR093W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Nucleolar protein%3B component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1542 bases
Position: chrXIII:454015-455556
Accession: S000004699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YMR093W_mRNA	UTP15_C	PF09384.10	2.9e-44	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YMR093W_mRNA	-	1542	-	YMR093W_mRNA	513 (aa)	-	Q04305

Gene Model

Click here to download YMR093W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YMR093W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YMR093W	-	99	31.008	ENSG00000164338	UTP15	100	33.333	Homo_sapiens
YMR093W	-	97	30.952	ENSAPOG00000005857	utp15	91	30.952	Acanthochromis_polyacanthus
YMR093W	-	99	30.250	ENSAMEG00000011501	UTP15	95	30.250	Ailuropoda_melanoleuca
YMR093W	-	97	31.953	ENSACIG00000018915	utp15	91	31.953	Amphilophus_citrinellus
YMR093W	-	97	31.151	ENSAOCG00000023576	utp15	91	31.151	Amphiprion_ocellaris
YMR093W	-	97	30.952	ENSAPEG00000016524	utp15	91	30.952	Amphiprion_percula
YMR093W	-	97	31.349	ENSATEG00000021278	utp15	91	31.558	Anabas_testudineus
YMR093W	-	93	31.263	ENSAPLG00000008503	UTP15	93	31.263	Anas_platyrhynchos
YMR093W	-	99	30.948	ENSACAG00000009351	UTP15	96	31.141	Anolis_carolinensis
YMR093W	-	99	31.202	ENSANAG00000033884	UTP15	95	31.202	Aotus_nancymaae
YMR093W	-	96	32.335	ENSACLG00000010164	utp15	84	32.335	Astatotilapia_calliptera
YMR093W	-	99	30.620	ENSAMXG00000034085	utp15	95	30.620	Astyanax_mexicanus
YMR093W	-	97	31.014	ENSBTAG00000006843	UTP15	92	31.014	Bos_taurus
YMR093W	-	99	31.008	ENSCJAG00000016617	UTP15	95	31.008	Callithrix_jacchus
YMR093W	-	99	31.081	ENSCAFG00020017037	UTP15	96	31.081	Canis_lupus_dingo
YMR093W	-	99	30.814	ENSCHIG00000016936	UTP15	94	30.814	Capra_hircus
YMR093W	-	99	30.695	ENSTSYG00000008265	UTP15	95	30.695	Carlito_syrichta
YMR093W	-	99	31.008	ENSCPOG00000006669	UTP15	95	31.008	Cavia_porcellus
YMR093W	-	99	31.202	ENSCCAG00000033397	UTP15	95	31.202	Cebus_capucinus
YMR093W	-	99	31.008	ENSCATG00000008006	UTP15	95	31.008	Cercocebus_atys
YMR093W	-	99	31.081	ENSCLAG00000016531	UTP15	95	31.081	Chinchilla_lanigera
YMR093W	-	99	30.814	ENSCSAG00000015499	UTP15	95	30.814	Chlorocebus_sabaeus
YMR093W	-	58	34.343	ENSCHOG00000013907	UTP15	55	34.343	Choloepus_hoffmanni
YMR093W	-	99	31.712	ENSCPBG00000000540	UTP15	94	31.712	Chrysemys_picta_bellii
YMR093W	-	96	35.060	ENSCING00000005314	-	95	35.060	Ciona_intestinalis
YMR093W	-	99	30.814	ENSCANG00000034698	UTP15	95	30.814	Colobus_angolensis_palliatus
YMR093W	-	99	30.695	ENSCGRG00001013836	Utp15	93	30.695	Cricetulus_griseus_chok1gshd
YMR093W	-	99	30.695	ENSCGRG00000002234	Utp15	93	30.695	Cricetulus_griseus_crigri
YMR093W	-	99	30.268	ENSCSEG00000019924	utp15	94	30.268	Cynoglossus_semilaevis
YMR093W	-	97	31.548	ENSCVAG00000019484	utp15	91	31.548	Cyprinodon_variegatus
YMR093W	-	99	31.783	ENSDARG00000002720	utp15	95	31.783	Danio_rerio
YMR093W	-	99	30.116	ENSDNOG00000043156	UTP15	95	30.116	Dasypus_novemcinctus
YMR093W	-	99	31.274	ENSDORG00000004399	Utp15	95	31.274	Dipodomys_ordii
YMR093W	-	96	32.079	FBgn0023527	CG3071	90	32.079	Drosophila_melanogaster
YMR093W	-	86	35.484	ENSETEG00000013977	UTP15	83	35.484	Echinops_telfairi
YMR093W	-	99	31.274	ENSEASG00005018111	UTP15	95	31.274	Equus_asinus_asinus
YMR093W	-	99	31.274	ENSECAG00000019428	UTP15	95	31.274	Equus_caballus
YMR093W	-	79	37.455	ENSEEUG00000010048	UTP15	82	37.455	Erinaceus_europaeus
YMR093W	-	97	31.213	ENSELUG00000004259	utp15	91	31.213	Esox_lucius
YMR093W	-	99	30.695	ENSFCAG00000026085	UTP15	95	30.695	Felis_catus
YMR093W	-	99	30.116	ENSFALG00000010206	UTP15	86	30.116	Ficedula_albicollis
YMR093W	-	99	30.620	ENSFDAG00000006305	UTP15	95	30.814	Fukomys_damarensis
YMR093W	-	97	31.518	ENSGMOG00000007251	utp15	93	31.961	Gadus_morhua
YMR093W	-	99	30.502	ENSGALG00000013510	UTP15	94	30.502	Gallus_gallus
YMR093W	-	97	30.754	ENSGAFG00000017377	utp15	91	30.754	Gambusia_affinis
YMR093W	-	97	30.556	ENSGACG00000004300	utp15	91	30.556	Gasterosteus_aculeatus
YMR093W	-	99	31.712	ENSGAGG00000006599	UTP15	99	32.553	Gopherus_agassizii
YMR093W	-	99	31.008	ENSGGOG00000003301	UTP15	95	31.008	Gorilla_gorilla
YMR093W	-	97	31.944	ENSHBUG00000000370	utp15	91	31.944	Haplochromis_burtoni
YMR093W	-	99	30.620	ENSHGLG00100005426	UTP15	95	30.620	Heterocephalus_glaber_male
YMR093W	-	99	30.174	ENSHCOG00000006823	utp15	93	30.174	Hippocampus_comes
YMR093W	-	99	31.395	ENSIPUG00000004917	utp15	95	31.395	Ictalurus_punctatus
YMR093W	-	99	30.680	ENSSTOG00000027733	UTP15	93	30.680	Ictidomys_tridecemlineatus
YMR093W	-	97	31.361	ENSKMAG00000004713	utp15	91	31.361	Kryptolebias_marmoratus
YMR093W	-	97	30.754	ENSLBEG00000024186	utp15	91	30.754	Labrus_bergylta
YMR093W	-	99	31.021	ENSLACG00000003219	UTP15	94	31.021	Latimeria_chalumnae
YMR093W	-	100	32.567	ENSLOCG00000011049	utp15	98	32.567	Lepisosteus_oculatus
YMR093W	-	99	31.660	ENSLAFG00000002596	UTP15	93	31.660	Loxodonta_africana
YMR093W	-	99	30.814	ENSMFAG00000031908	UTP15	95	30.814	Macaca_fascicularis
YMR093W	-	99	30.814	ENSMMUG00000023514	UTP15	95	30.814	Macaca_mulatta
YMR093W	-	99	30.814	ENSMNEG00000032169	UTP15	95	30.814	Macaca_nemestrina
YMR093W	-	99	31.202	ENSMLEG00000038816	UTP15	95	31.202	Mandrillus_leucophaeus
YMR093W	-	97	31.755	ENSMAMG00000013321	utp15	90	31.944	Mastacembelus_armatus
YMR093W	-	97	32.143	ENSMZEG00005010536	utp15	91	32.143	Maylandia_zebra
YMR093W	-	99	30.888	ENSMAUG00000018838	Utp15	93	30.888	Mesocricetus_auratus
YMR093W	-	99	30.814	ENSMICG00000011813	-	95	31.202	Microcebus_murinus
YMR093W	-	88	33.935	ENSMICG00000037267	-	86	33.935	Microcebus_murinus
YMR093W	-	99	31.202	ENSMOCG00000000493	Utp15	93	31.202	Microtus_ochrogaster
YMR093W	-	97	31.944	ENSMMOG00000012931	utp15	92	31.944	Mola_mola
YMR093W	-	93	30.977	ENSMODG00000001789	UTP15	91	30.632	Monodelphis_domestica
YMR093W	-	96	31.349	ENSMALG00000021353	utp15	90	31.349	Monopterus_albus
YMR093W	-	99	30.309	ENSMUSG00000041747	Utp15	93	30.309	Mus_musculus
YMR093W	-	99	30.309	MGP_PahariEiJ_G0015893	Utp15	93	30.309	Mus_pahari
YMR093W	-	99	30.116	MGP_SPRETEiJ_G0019700	Utp15	93	30.116	Mus_spretus
YMR093W	-	99	30.695	ENSMPUG00000005850	UTP15	95	30.695	Mustela_putorius_furo
YMR093W	-	99	31.660	ENSMLUG00000008483	UTP15	96	31.660	Myotis_lucifugus
YMR093W	-	99	30.233	ENSNGAG00000022574	Utp15	95	30.233	Nannospalax_galili
YMR093W	-	97	32.347	ENSNBRG00000020654	utp15	91	32.347	Neolamprologus_brichardi
YMR093W	-	95	31.250	ENSNLEG00000004753	UTP15	96	31.250	Nomascus_leucogenys
YMR093W	-	79	31.695	ENSMEUG00000002833	UTP15	73	31.695	Notamacropus_eugenii
YMR093W	-	99	31.395	ENSOPRG00000012979	UTP15	95	31.395	Ochotona_princeps
YMR093W	-	97	31.287	ENSODEG00000001962	UTP15	92	31.287	Octodon_degus
YMR093W	-	97	31.953	ENSONIG00000014323	utp15	91	31.953	Oreochromis_niloticus
YMR093W	-	88	32.026	ENSOANG00000008695	UTP15	96	32.026	Ornithorhynchus_anatinus
YMR093W	-	99	30.814	ENSOCUG00000000617	UTP15	95	30.814	Oryctolagus_cuniculus
YMR093W	-	96	30.876	ENSORLG00000002095	utp15	90	30.876	Oryzias_latipes
YMR093W	-	96	30.677	ENSORLG00020006632	utp15	90	30.677	Oryzias_latipes_hni
YMR093W	-	96	30.279	ENSORLG00015016375	utp15	90	30.279	Oryzias_latipes_hsok
YMR093W	-	99	30.000	ENSOMEG00000016645	utp15	93	30.000	Oryzias_melastigma
YMR093W	-	99	30.502	ENSOGAG00000000388	UTP15	95	30.502	Otolemur_garnettii
YMR093W	-	99	30.620	ENSPPAG00000031829	UTP15	94	30.620	Pan_paniscus
YMR093W	-	99	30.695	ENSPPRG00000003745	UTP15	95	30.695	Panthera_pardus
YMR093W	-	99	30.368	ENSPTIG00000014484	UTP15	95	30.368	Panthera_tigris_altaica
YMR093W	-	99	30.814	ENSPTRG00000016982	UTP15	95	30.814	Pan_troglodytes
YMR093W	-	99	30.814	ENSPANG00000009302	UTP15	95	30.814	Papio_anubis
YMR093W	-	99	32.171	ENSPKIG00000019386	utp15	94	32.171	Paramormyrops_kingsleyae
YMR093W	-	99	30.739	ENSPSIG00000014028	UTP15	94	30.739	Pelodiscus_sinensis
YMR093W	-	99	31.335	ENSPMGG00000013060	utp15	92	31.335	Periophthalmus_magnuspinnatus
YMR093W	-	99	30.888	ENSPEMG00000012771	Utp15	93	30.888	Peromyscus_maniculatus_bairdii
YMR093W	-	99	30.814	ENSPCIG00000027448	UTP15	96	30.814	Phascolarctos_cinereus
YMR093W	-	97	30.178	ENSPFOG00000014446	utp15	90	30.178	Poecilia_formosa
YMR093W	-	99	30.192	ENSPLAG00000014623	utp15	91	30.556	Poecilia_latipinna
YMR093W	-	99	30.000	ENSPMEG00000020067	utp15	90	30.357	Poecilia_mexicana
YMR093W	-	99	30.368	ENSPREG00000010394	utp15	93	30.368	Poecilia_reticulata
YMR093W	-	99	30.814	ENSPPYG00000015550	UTP15	95	30.814	Pongo_abelii
YMR093W	-	86	36.452	ENSPCAG00000012880	UTP15	83	36.452	Procavia_capensis
YMR093W	-	88	36.530	ENSPVAG00000007162	UTP15	83	36.530	Pteropus_vampyrus
YMR093W	-	97	31.944	ENSPNYG00000007278	utp15	91	31.944	Pundamilia_nyererei
YMR093W	-	99	31.008	ENSPNAG00000025612	utp15	95	31.008	Pygocentrus_nattereri
YMR093W	-	99	30.620	ENSRROG00000034462	UTP15	95	30.620	Rhinopithecus_roxellana
YMR093W	-	99	31.008	ENSSBOG00000035374	UTP15	95	31.008	Saimiri_boliviensis_boliviensis
YMR093W	-	99	31.395	ENSSHAG00000013388	UTP15	94	31.395	Sarcophilus_harrisii
YMR093W	-	97	32.540	ENSSFOG00015015712	utp15	91	32.540	Scleropages_formosus
YMR093W	-	97	30.556	ENSSMAG00000007133	utp15	91	30.556	Scophthalmus_maximus
YMR093W	-	97	31.746	ENSSDUG00000022792	utp15	91	31.746	Seriola_dumerili
YMR093W	-	97	31.548	ENSSLDG00000003254	utp15	91	31.548	Seriola_lalandi_dorsalis
YMR093W	-	95	30.346	ENSSPUG00000000063	UTP15	95	30.346	Sphenodon_punctatus
YMR093W	-	99	30.577	ENSSPAG00000008124	utp15	93	30.577	Stegastes_partitus
YMR093W	-	97	31.683	ENSSSCG00000014068	UTP15	92	31.683	Sus_scrofa
YMR093W	-	99	30.116	ENSTGUG00000005903	UTP15	94	30.116	Taeniopygia_guttata
YMR093W	-	99	31.589	ENSTRUG00000020924	utp15	96	31.589	Takifugu_rubripes
YMR093W	-	97	31.693	ENSTNIG00000015387	utp15	93	31.693	Tetraodon_nigroviridis
YMR093W	-	93	31.470	ENSTBEG00000009170	UTP15	93	31.470	Tupaia_belangeri
YMR093W	-	99	31.274	ENSTTRG00000007294	UTP15	94	31.274	Tursiops_truncatus
YMR093W	-	99	30.888	ENSUAMG00000019538	UTP15	99	32.088	Ursus_americanus
YMR093W	-	99	30.888	ENSUMAG00000007568	UTP15	95	30.888	Ursus_maritimus
YMR093W	-	97	31.881	ENSVPAG00000009611	UTP15	93	31.881	Vicugna_pacos
YMR093W	-	99	31.081	ENSVVUG00000007505	UTP15	95	31.081	Vulpes_vulpes
YMR093W	-	99	31.660	ENSXETG00000016821	utp15	95	31.660	Xenopus_tropicalis
YMR093W	-	97	30.754	ENSXCOG00000001529	utp15	91	30.754	Xiphophorus_couchianus
YMR093W	-	99	30.192	ENSXMAG00000014206	utp15	91	30.556	Xiphophorus_maculatus