EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
YMR142C (Gene tree)
Gene ID
-
Gene Symbol
RPL13B
Alias
-
Full Name
Ribosomal 60S subunit protein L13B%3B not essential for viability%3B homologous to mammalian ribosomal protein L13%2C no bacterial homolog%3B RPL13B has a paralog%2C RPL13A%2C that arose from the whole genome duplication
Gene Type
protein_coding
Species
Saccharomyces_cerevisiae
Status
confidence
Strand
Minus strand
Length
1002 bases
Position
chrXIII:550206-551207
Accession
S000004750
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
YMR142C_mRNARibosomal_L13ePF01294.187e-6811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26632259The RNA-binding proteomes from yeast to man harbour conserved enigmRBPsRIC.PAR_CL & yeast2015 Dec 3Beckmann BMDOI: 10.1038/ncomms10127
26595419Conserved mRNA-binding proteomes in eukaryotic organismsmRBPome & yeast2015 Nov 23Matia Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
YMR142C_mRNA-600-YMR142C_mRNA199 (aa)-P40212
Gene Model
Click here to download YMR142C's gene model file
Protein-Protein Interaction (PPI)

Clik here to download YMR142C's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
YMR142CRPL13B10098.995YDL082WRPL13A10098.995
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
YMR142CRPL13B10049.057ENSG00000167526RPL1310056.349Homo_sapiens
YMR142CRPL13B10050.711ENSAPOG00000010933rpl139249.485Acanthochromis_polyacanthus
YMR142CRPL13B10042.180ENSAMEG00000001111RPL139139.691Ailuropoda_melanoleuca
YMR142CRPL13B10050.472ENSACIG00000000422rpl139248.969Amphilophus_citrinellus
YMR142CRPL13B10050.711ENSAOCG00000014635rpl139249.485Amphiprion_ocellaris
YMR142CRPL13B10050.711ENSAPEG00000011271rpl139249.485Amphiprion_percula
YMR142CRPL13B10049.763ENSATEG00000004902rpl139448.168Anabas_testudineus
YMR142CRPL13B10050.237ENSACAG00000017072RPL139248.454Anolis_carolinensis
YMR142CRPL13B10049.528ENSANAG00000030539RPL139248.205Aotus_nancymaae
YMR142CRPL13B10050.000ENSACLG00000001642rpl139248.454Astatotilapia_calliptera
YMR142CRPL13B10049.528ENSAMXG00000006495rpl139248.205Astyanax_mexicanus
YMR142CRPL13B10050.472ENSBTAG00000012044RPL136649.231Bos_taurus
YMR142CRPL13B10045.024ENSBTAG00000033143-9243.523Bos_taurus
YMR142CRPL13B9649.510WBGene00004425rpl-139347.668Caenorhabditis_elegans
YMR142CRPL13B10049.528ENSCJAG00000009672-9248.205Callithrix_jacchus
YMR142CRPL13B9948.571ENSCJAG00000016268-9247.423Callithrix_jacchus
YMR142CRPL13B10049.528ENSCAFG00000019840RPL139248.205Canis_familiaris
YMR142CRPL13B7337.821ENSCAFG00020024795-6634.532Canis_lupus_dingo
YMR142CRPL13B10049.528ENSCAFG00020005125RPL139248.205Canis_lupus_dingo
YMR142CRPL13B10050.472ENSCHIG00000001441-9249.231Capra_hircus
YMR142CRPL13B10043.842ENSCHIG00000026795-8441.935Capra_hircus
YMR142CRPL13B9745.894ENSCHIG00000017227-8447.692Capra_hircus
YMR142CRPL13B10050.000ENSTSYG00000027423RPL139248.718Carlito_syrichta
YMR142CRPL13B10049.528ENSCPOG00000027348RPL139248.205Cavia_porcellus
YMR142CRPL13B10049.528ENSCCAG00000024248RPL139248.205Cebus_capucinus
YMR142CRPL13B10049.528ENSCATG00000042426RPL139248.205Cercocebus_atys
YMR142CRPL13B9941.463ENSCATG00000038806-8840.741Cercocebus_atys
YMR142CRPL13B10049.528ENSCLAG00000003801RPL139248.205Chinchilla_lanigera
YMR142CRPL13B10049.057ENSCSAG00000000476-9247.692Chlorocebus_sabaeus
YMR142CRPL13B10047.867ENSCPBG00000013618RPL139246.392Chrysemys_picta_bellii
YMR142CRPL13B9949.282ENSCING00000002582-8849.223Ciona_intestinalis
YMR142CRPL13B9747.959ENSCSAVG00000007075-9447.027Ciona_savignyi
YMR142CRPL13B6647.552ENSCANG00000028258RPL136845.238Colobus_angolensis_palliatus
YMR142CRPL13B10048.815ENSCGRG00001022563Rpl139247.423Cricetulus_griseus_chok1gshd
YMR142CRPL13B10041.509ENSCGRG00001023328-9241.711Cricetulus_griseus_chok1gshd
YMR142CRPL13B8436.313ENSCGRG00000016503-8138.571Cricetulus_griseus_crigri
YMR142CRPL13B10048.341ENSCGRG00000014556Rpl139247.423Cricetulus_griseus_crigri
YMR142CRPL13B10050.711ENSCSEG00000008346rpl139249.485Cynoglossus_semilaevis
YMR142CRPL13B10051.185ENSCVAG00000019742rpl139250.000Cyprinodon_variegatus
YMR142CRPL13B10050.000ENSDARG00000099380rpl139753.896Danio_rerio
YMR142CRPL13B10049.528ENSDNOG00000034247RPL139248.205Dasypus_novemcinctus
YMR142CRPL13B7948.538ENSDORG00000028330Rpl138246.809Dipodomys_ordii
YMR142CRPL13B9745.673FBgn0011272RpL138944.388Drosophila_melanogaster
YMR142CRPL13B6839.416ENSETEG00000004518-7339.416Echinops_telfairi
YMR142CRPL13B6757.037ENSETEG00000015057-6357.037Echinops_telfairi
YMR142CRPL13B10046.445ENSEBUG00000000730rpl139245.876Eptatretus_burgeri
YMR142CRPL13B9933.668ENSEEUG00000006113-6333.582Erinaceus_europaeus
YMR142CRPL13B6754.074ENSEEUG00000011190-9654.074Erinaceus_europaeus
YMR142CRPL13B10050.239ENSELUG00000014509rpl139248.168Esox_lucius
YMR142CRPL13B8636.264ENSFCAG00000029961-9334.066Felis_catus
YMR142CRPL13B10049.057ENSFCAG00000003338RPL139247.692Felis_catus
YMR142CRPL13B10048.113ENSFALG00000003173RPL139246.667Ficedula_albicollis
YMR142CRPL13B10049.528ENSFDAG00000011310RPL139248.205Fukomys_damarensis
YMR142CRPL13B10051.185ENSFHEG00000006122rpl139250.000Fundulus_heteroclitus
YMR142CRPL13B10049.289ENSGMOG00000002752rpl139248.454Gadus_morhua
YMR142CRPL13B10048.815ENSGALG00000006179RPL139247.423Gallus_gallus
YMR142CRPL13B10050.000ENSGAFG00000017260rpl139149.180Gambusia_affinis
YMR142CRPL13B10049.057ENSGACG00000015752rpl139248.454Gasterosteus_aculeatus
YMR142CRPL13B10048.341ENSGAGG00000003371RPL139246.907Gopherus_agassizii
YMR142CRPL13B10042.512ENSGGOG00000026762-9140.526Gorilla_gorilla
YMR142CRPL13B8249.153ENSGGOG00000025427RPL138046.809Gorilla_gorilla
YMR142CRPL13B10049.528ENSHBUG00000013579rpl139247.938Haplochromis_burtoni
YMR142CRPL13B10049.528ENSHGLG00000010880RPL139248.205Heterocephalus_glaber_female
YMR142CRPL13B10049.528ENSHGLG00100018449RPL139248.205Heterocephalus_glaber_male
YMR142CRPL13B10048.815ENSHCOG00000002997rpl139247.423Hippocampus_comes
YMR142CRPL13B10050.943ENSIPUG00000009775rpl139249.744Ictalurus_punctatus
YMR142CRPL13B10049.057ENSSTOG00000011963RPL139244.330Ictidomys_tridecemlineatus
YMR142CRPL13B10049.528ENSJJAG00000014012Rpl139248.205Jaculus_jaculus
YMR142CRPL13B10042.180ENSJJAG00000000236-6549.254Jaculus_jaculus
YMR142CRPL13B10050.000ENSKMAG00000006540rpl139248.454Kryptolebias_marmoratus
YMR142CRPL13B10050.237ENSLBEG00000026455rpl139248.969Labrus_bergylta
YMR142CRPL13B5441.176ENSLACG00000005311-8635.294Latimeria_chalumnae
YMR142CRPL13B8040.571ENSLACG00000002299-6839.716Latimeria_chalumnae
YMR142CRPL13B10049.763ENSLACG00000013768rpl139248.454Latimeria_chalumnae
YMR142CRPL13B5937.500ENSLACG00000014843-8335.714Latimeria_chalumnae
YMR142CRPL13B5047.525ENSLACG00000001306-6150.617Latimeria_chalumnae
YMR142CRPL13B10050.237ENSLOCG00000004063rpl139249.485Lepisosteus_oculatus
YMR142CRPL13B10050.000ENSLAFG00000004054RPL139248.718Loxodonta_africana
YMR142CRPL13B10040.000ENSMFAG00000046109-8838.830Macaca_fascicularis
YMR142CRPL13B10049.528ENSMFAG00000027717-9248.205Macaca_fascicularis
YMR142CRPL13B10049.528ENSMMUG00000017928RPL139248.205Macaca_mulatta
YMR142CRPL13B9940.976ENSMMUG00000038060-8840.212Macaca_mulatta
YMR142CRPL13B9940.488ENSMNEG00000030483-8839.683Macaca_nemestrina
YMR142CRPL13B10037.864ENSMLEG00000036728-5255.814Mandrillus_leucophaeus
YMR142CRPL13B9939.706ENSMLEG00000033776-8838.830Mandrillus_leucophaeus
YMR142CRPL13B10050.711ENSMAMG00000021552rpl139249.485Mastacembelus_armatus
YMR142CRPL13B10050.000ENSMZEG00005014343rpl139248.454Maylandia_zebra
YMR142CRPL13B8348.023ENSMGAG00000008027RPL137945.000Meleagris_gallopavo
YMR142CRPL13B10046.698ENSMAUG00000016802-9245.128Mesocricetus_auratus
YMR142CRPL13B6757.037ENSMAUG00000020543-9753.247Mesocricetus_auratus
YMR142CRPL13B10048.585ENSMICG00000043954-9247.179Microcebus_murinus
YMR142CRPL13B6757.037ENSMICG00000027620-7857.037Microcebus_murinus
YMR142CRPL13B10049.528ENSMOCG00000009058-9248.205Microtus_ochrogaster
YMR142CRPL13B10044.019ENSMOCG00000016985-6348.507Microtus_ochrogaster
YMR142CRPL13B10040.566ENSMOCG00000011602-9137.113Microtus_ochrogaster
YMR142CRPL13B10048.585ENSMOCG00000002216-9247.179Microtus_ochrogaster
YMR142CRPL13B10047.549ENSMOCG00000021875-9145.989Microtus_ochrogaster
YMR142CRPL13B10050.472ENSMMOG00000016577rpl139248.969Mola_mola
YMR142CRPL13B10049.057ENSMODG00000003663RPL139247.423Monodelphis_domestica
YMR142CRPL13B10050.000ENSMALG00000020934rpl139248.454Monopterus_albus
YMR142CRPL13B10049.528MGP_CAROLIEiJ_G0031676Rpl139248.205Mus_caroli
YMR142CRPL13B10049.528ENSMUSG00000000740Rpl139248.205Mus_musculus
YMR142CRPL13B10049.528MGP_PahariEiJ_G0023274Rpl139248.205Mus_pahari
YMR142CRPL13B10049.528MGP_SPRETEiJ_G0032794Rpl139248.205Mus_spretus
YMR142CRPL13B9446.231MGP_SPRETEiJ_G0031839-7645.361Mus_spretus
YMR142CRPL13B10049.528ENSMLUG00000010950RPL138648.205Myotis_lucifugus
YMR142CRPL13B10049.528ENSNGAG00000018467Rpl139248.205Nannospalax_galili
YMR142CRPL13B8140.116ENSNGAG00000014655-6441.270Nannospalax_galili
YMR142CRPL13B8337.791ENSNGAG00000012072-7534.815Nannospalax_galili
YMR142CRPL13B10050.000ENSNBRG00000011031rpl139248.718Neolamprologus_brichardi
YMR142CRPL13B10040.097ENSNLEG00000028759-9238.220Nomascus_leucogenys
YMR142CRPL13B10049.057ENSNLEG00000015774RPL139247.692Nomascus_leucogenys
YMR142CRPL13B10050.000ENSODEG00000004235-9248.718Octodon_degus
YMR142CRPL13B10045.972ENSODEG00000019351-9244.845Octodon_degus
YMR142CRPL13B10048.113ENSODEG00000020384-9246.667Octodon_degus
YMR142CRPL13B10048.585ENSODEG00000019915-9247.179Octodon_degus
YMR142CRPL13B10049.528ENSODEG00000019458-9248.205Octodon_degus
YMR142CRPL13B10049.289ENSODEG00000019297-9247.938Octodon_degus
YMR142CRPL13B10050.000ENSONIG00000005934rpl139248.718Oreochromis_niloticus
YMR142CRPL13B10048.815ENSOANG00000006729RPL139247.423Ornithorhynchus_anatinus
YMR142CRPL13B10047.393ENSOCUG00000024415-9245.876Oryctolagus_cuniculus
YMR142CRPL13B10046.919ENSOCUG00000022399-9245.361Oryctolagus_cuniculus
YMR142CRPL13B10045.972ENSOCUG00000007536-9243.814Oryctolagus_cuniculus
YMR142CRPL13B10050.237ENSORLG00000007654rpl139248.969Oryzias_latipes
YMR142CRPL13B10050.237ENSORLG00020009960rpl139248.969Oryzias_latipes_hni
YMR142CRPL13B10050.237ENSORLG00015008108rpl139648.691Oryzias_latipes_hsok
YMR142CRPL13B10050.711ENSOMEG00000001728rpl139449.223Oryzias_melastigma
YMR142CRPL13B10049.057ENSOGAG00000026444RPL139247.692Otolemur_garnettii
YMR142CRPL13B10048.113ENSOARG00000003957-6547.692Ovis_aries
YMR142CRPL13B8248.864ENSPPAG00000029415-8046.809Pan_paniscus
YMR142CRPL13B9947.761ENSPPAG00000042590-8846.486Pan_paniscus
YMR142CRPL13B10042.523ENSPPAG00000041631-9240.609Pan_paniscus
YMR142CRPL13B10049.057ENSPPRG00000003949RPL139247.692Panthera_pardus
YMR142CRPL13B7737.500ENSPPRG00000006057-7535.294Panthera_pardus
YMR142CRPL13B6043.511ENSPTIG00000010985RPL137440.351Panthera_tigris_altaica
YMR142CRPL13B7737.500ENSPTIG00000014719-7535.294Panthera_tigris_altaica
YMR142CRPL13B10042.056ENSPTRG00000047911-9240.609Pan_troglodytes
YMR142CRPL13B10048.020ENSPTRG00000041770-9246.486Pan_troglodytes
YMR142CRPL13B10049.057ENSPTRG00000008480RPL139247.692Pan_troglodytes
YMR142CRPL13B10049.528ENSPANG00000031667RPL139248.205Papio_anubis
YMR142CRPL13B10049.289ENSPKIG00000001789rpl139248.454Paramormyrops_kingsleyae
YMR142CRPL13B10047.867ENSPSIG00000015634RPL139246.392Pelodiscus_sinensis
YMR142CRPL13B10050.711ENSPMGG00000006067rpl139249.485Periophthalmus_magnuspinnatus
YMR142CRPL13B10049.528ENSPEMG00000010342Rpl139248.205Peromyscus_maniculatus_bairdii
YMR142CRPL13B10050.711ENSPFOG00000013435rpl139249.485Poecilia_formosa
YMR142CRPL13B10050.711ENSPLAG00000004085rpl139249.485Poecilia_latipinna
YMR142CRPL13B10050.711ENSPMEG00000015599rpl139249.485Poecilia_mexicana
YMR142CRPL13B10050.237ENSPREG00000023190rpl139248.969Poecilia_reticulata
YMR142CRPL13B10049.528ENSPCAG00000015461RPL139248.205Procavia_capensis
YMR142CRPL13B10049.057ENSPCOG00000024647RPL139247.692Propithecus_coquereli
YMR142CRPL13B10047.393ENSPVAG00000015130RPL139245.876Pteropus_vampyrus
YMR142CRPL13B10049.528ENSPNYG00000013189rpl139247.938Pundamilia_nyererei
YMR142CRPL13B10050.472ENSPNAG00000002916rpl139249.231Pygocentrus_nattereri
YMR142CRPL13B10047.887ENSRNOG00000029227AABR07054469.19246.429Rattus_norvegicus
YMR142CRPL13B10049.528ENSRNOG00000055911LOC1003612599248.205Rattus_norvegicus
YMR142CRPL13B10050.000ENSRNOG00000015335Rpl139248.718Rattus_norvegicus
YMR142CRPL13B10049.057ENSRNOG00000061438LOC1003604919247.692Rattus_norvegicus
YMR142CRPL13B9945.972ENSRNOG00000059545AC114446.19243.814Rattus_norvegicus
YMR142CRPL13B9940.196ENSRBIG00000010434-8139.362Rhinopithecus_bieti
YMR142CRPL13B10049.528ENSRBIG00000031937RPL139248.205Rhinopithecus_bieti
YMR142CRPL13B10049.528ENSRROG00000036999-9248.205Rhinopithecus_roxellana
YMR142CRPL13B9940.196ENSRROG00000025626-8139.362Rhinopithecus_roxellana
YMR142CRPL13B10049.528ENSSBOG00000028589-9248.205Saimiri_boliviensis_boliviensis
YMR142CRPL13B10040.000ENSSBOG00000019618-9237.895Saimiri_boliviensis_boliviensis
YMR142CRPL13B10050.472ENSSFOG00015019594rpl139249.231Scleropages_formosus
YMR142CRPL13B10050.472ENSSMAG00000021443rpl139249.231Scophthalmus_maximus
YMR142CRPL13B10050.711ENSSDUG00000001262rpl139249.485Seriola_dumerili
YMR142CRPL13B10050.711ENSSLDG00000021182rpl139249.485Seriola_lalandi_dorsalis
YMR142CRPL13B8746.774ENSSLDG00000007067-8546.448Seriola_lalandi_dorsalis
YMR142CRPL13B6757.778ENSSPUG00000006904RPL137557.778Sphenodon_punctatus
YMR142CRPL13B10050.711ENSSPAG00000020434rpl139249.485Stegastes_partitus
YMR142CRPL13B9939.512ENSSSCG00000003723-6341.791Sus_scrofa
YMR142CRPL13B9337.056ENSSSCG00000007813-9537.113Sus_scrofa
YMR142CRPL13B9835.149ENSSSCG00000029020-8632.432Sus_scrofa
YMR142CRPL13B10039.706ENSSSCG00000036198-9039.884Sus_scrofa
YMR142CRPL13B9837.374ENSSSCG00000033294-8639.412Sus_scrofa
YMR142CRPL13B10050.943ENSSSCG00000024974RPL139249.744Sus_scrofa
YMR142CRPL13B10046.698ENSTGUG00000007874RPL139245.128Taeniopygia_guttata
YMR142CRPL13B10050.943ENSTRUG00000021170rpl139249.744Takifugu_rubripes
YMR142CRPL13B10050.472ENSTNIG00000009349rpl139248.969Tetraodon_nigroviridis
YMR142CRPL13B10050.472ENSTTRG00000004374RPL139249.231Tursiops_truncatus
YMR142CRPL13B10049.057ENSUAMG00000020363RPL139247.692Ursus_americanus
YMR142CRPL13B5243.478ENSVPAG00000000569-8942.342Vicugna_pacos
YMR142CRPL13B10045.755ENSVVUG00000003839-9142.268Vulpes_vulpes
YMR142CRPL13B8933.508ENSVVUG00000005779-5836.585Vulpes_vulpes
YMR142CRPL13B10046.919ENSXETG00000019835rpl139245.876Xenopus_tropicalis
YMR142CRPL13B10050.711ENSXCOG00000011315rpl139249.485Xiphophorus_couchianus
YMR142CRPL13B10050.711ENSXMAG00000003221rpl139249.485Xiphophorus_maculatus

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