EuRBPDB

Description

Ensembl ID: YMR186W (Gene tree)
Gene ID: -
Gene Symbol: HSC82
Alias: HSP90
Full Name: Cytoplasmic chaperone of the Hsp90 family%3B plays a role in determining prion variants%3B redundant in function and nearly identical with Hsp82p%2C and together they are essential%3B expressed constitutively at 10-fold higher basal levels than HSP82 and induced 2-3 fold by heat shock%3B contains two acid-rich unstructured regions that promote the solubility of chaperone-substrate complexes%3B HSC82 has a paralog%2C HSP82%2C that arose from the whole genome duplication
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 2118
Position: chrXIII: 632355-634472
Accession: S000004798
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
20844764	Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiae	MS & yeast	2010 Sep 10	Tsvetanova NG	DOI: 10.1371/journal.pone.0012671

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YMR186W_mRNA	-	2118	-	YMR186W_mRNA	705 (aa)	-	P15108

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YMR186W	HSC82	99	62.147	WBGene00000915	daf-21	99	62.288	Caenorhabditis_elegans
YMR186W	HSC82	99	60.000	FBgn0001233	Hsp83	99	60.280	Drosophila_melanogaster
YMR186W	HSC82	94	34.493	FBgn0026761	Trap1	90	34.348	Drosophila_melanogaster
YMR186W	HSC82	99	60.251	ENSG00000080824	HSP90AA1	73	86.842	Homo_sapiens
YMR186W	HSC82	99	61.150	ENSG00000096384	HSP90AB1	61	60.762	Homo_sapiens
YMR186W	HSC82	96	48.980	ENSG00000166598	HSP90B1	100	64.583	Homo_sapiens
YMR186W	HSC82	86	45.411	ENSG00000126602	TRAP1	93	45.411	Homo_sapiens
YMR186W	HSC82	99	60.306	ENSMUSG00000021270	Hsp90aa1	92	70.811	Mus_musculus
YMR186W	HSC82	99	61.571	ENSMUSG00000023944	Hsp90ab1	91	87.500	Mus_musculus
YMR186W	HSC82	95	48.684	ENSMUSG00000020048	Hsp90b1	89	49.398	Mus_musculus
YMR186W	HSC82	86	43.961	ENSMUSG00000005981	Trap1	86	43.961	Mus_musculus
YMR186W	HSC82	100	96.901	YPL240C	HSP82	100	96.901	Saccharomyces_cerevisiae