EuRBPDB

Description

Ensembl ID: YMR194W (Gene tree)
Gene ID: -
Gene Symbol: RPL36A
Alias: RPL39B
Full Name: Ribosomal 60S subunit protein L36A%3B N-terminally acetylated%3B binds to 5.8 S rRNA%3B homologous to mammalian ribosomal protein L36%2C no bacterial homolog%3B RPL36A has a paralog%2C RPL36B%2C that arose from the whole genome duplication
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 766 bases
Position: chrXIII:651145-651910
Accession: S000004807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YMR194W_mRNA	Ribosomal_L36e	PF01158.18	2.9e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YMR194W_mRNA	-	303	-	YMR194W_mRNA	100 (aa)	-	P05745

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YMR194W	RPL36A	100	98.000	YPL249C-A	RPL36B	100	98.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YMR194W	RPL36A	94	48.936	WBGene00004450	rpl-36	90	48.936	Caenorhabditis_elegans
YMR194W	RPL36A	93	49.462	ENSCING00000012007	-	95	49.462	Ciona_intestinalis
YMR194W	RPL36A	99	48.485	ENSCSAVG00000005153	-	96	48.485	Ciona_savignyi
YMR194W	RPL36A	99	41.284	FBgn0002579	RpL36	95	41.284	Drosophila_melanogaster
YMR194W	RPL36A	95	50.526	ENSSLDG00000002939	-	83	50.526	Seriola_lalandi_dorsalis