EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
YMR260C (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
Translation initiation factor eIF1A%3B essential protein that forms a complex with Sui1p (eIF1) and the 40S ribosomal subunit and scans for the start codon%3B C-terminus associates with Fun12p (eIF5B)%3B N terminus interacts with eIF2 and eIF3
Gene Type
protein_coding
Species
Saccharomyces_cerevisiae
Status
confidence
Strand
Minus strand
Length
462 bases
Position
chrXIII:789378-789839
Accession
S000004873
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
YMR260C_mRNAeIF-1aPF01176.191.8e-2011
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26632259The RNA-binding proteomes from yeast to man harbour conserved enigmRBPsRIC.PAR_CL & yeast2015 Dec 3Beckmann BMDOI: 10.1038/ncomms10127
26595419Conserved mRNA-binding proteomes in eukaryotic organismsmRBPome & yeast2015 Nov 23Matia Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
YMR260C_mRNA-462-YMR260C_mRNA153 (aa)-P38912
Gene Model
Click here to download YMR260C's gene model file
Protein-Protein Interaction (PPI)

Clik here to download YMR260C's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
YMR260C-8665.649ENSG00000198692EIF1AY8165.517Homo_sapiens
YMR260C-8665.649ENSG00000173674EIF1AX8667.000Homo_sapiens
YMR260C-8657.252ENSAPOG00000017330eif1axb7356.034Acanthochromis_polyacanthus
YMR260C-8665.649ENSAPOG00000005336eif1axb8165.517Acanthochromis_polyacanthus
YMR260C-8465.891ENSAMEG00000016604EIF1AX8265.517Ailuropoda_melanoleuca
YMR260C-8657.252ENSACIG00000009147eif1axb6856.034Amphilophus_citrinellus
YMR260C-8665.649ENSAOCG00000018986eif1axb8165.517Amphiprion_ocellaris
YMR260C-8665.649ENSAPEG00000005361eif1axb8165.517Amphiprion_percula
YMR260C-8665.649ENSATEG00000021109eif1axb7365.517Anabas_testudineus
YMR260C-8665.649ENSACAG00000012660-8165.517Anolis_carolinensis
YMR260C-6468.367ENSANAG00000036820-8367.677Aotus_nancymaae
YMR260C-9648.299ENSANAG00000029064-8347.009Aotus_nancymaae
YMR260C-8665.649ENSANAG00000030856EIF1AX8667.000Aotus_nancymaae
YMR260C-6561.616ENSANAG00000029127-8661.000Aotus_nancymaae
YMR260C-8665.649ENSACLG00000015402eif1axb8165.517Astatotilapia_calliptera
YMR260C-8664.885ENSAMXG00000032495eif1axb8164.655Astyanax_mexicanus
YMR260C-8665.649ENSAMXG00000031325eif1axa8165.517Astyanax_mexicanus
YMR260C-8665.649ENSBTAG00000017633EIF1AX8165.517Bos_taurus
YMR260C-8665.649ENSCJAG00000005371EIF1AX8766.667Callithrix_jacchus
YMR260C-8665.649ENSCAFG00000032071EIF1AX8165.517Canis_familiaris
YMR260C-8665.649ENSCAFG00020004588EIF1AX8165.517Canis_lupus_dingo
YMR260C-8665.649ENSCHIG00000021471EIF1AX8165.517Capra_hircus
YMR260C-6944.860ENSCHIG00000000406-8346.392Capra_hircus
YMR260C-8665.649ENSTSYG00000012460EIF1AX8667.000Carlito_syrichta
YMR260C-8663.359ENSCAPG00000006533-8162.931Cavia_aperea
YMR260C-7957.025ENSCAPG00000006145-8258.095Cavia_aperea
YMR260C-8659.542ENSCAPG00000002546-8158.621Cavia_aperea
YMR260C-9163.571ENSCAPG00000005844-8164.655Cavia_aperea
YMR260C-8665.649ENSCPOG00000039205-8165.517Cavia_porcellus
YMR260C-6567.677ENSCCAG00000020517-8667.000Cebus_capucinus
YMR260C-8661.832ENSCCAG00000026888-8162.609Cebus_capucinus
YMR260C-8665.649ENSCCAG00000020815EIF1AY8165.517Cebus_capucinus
YMR260C-8665.649ENSCATG00000033237EIF1AX8667.000Cercocebus_atys
YMR260C-8657.252ENSCATG00000029207-7856.034Cercocebus_atys
YMR260C-8665.649ENSCLAG00000000709EIF1AX8165.517Chinchilla_lanigera
YMR260C-8665.649ENSCSAG00000018313EIF1AY8165.517Chlorocebus_sabaeus
YMR260C-8665.649ENSCSAG00000014562EIF1AX8165.517Chlorocebus_sabaeus
YMR260C-8665.649ENSCHOG00000008111EIF1AX8165.517Choloepus_hoffmanni
YMR260C-8665.649ENSCPBG00000006126EIF1AY8165.517Chrysemys_picta_bellii
YMR260C-9259.286ENSCING00000006224-5466.667Ciona_intestinalis
YMR260C-5166.667ENSCSAVG00000004949-5366.667Ciona_savignyi
YMR260C-8665.649ENSCANG00000013429EIF1AX8667.000Colobus_angolensis_palliatus
YMR260C-7154.128ENSCGRG00001012123-8553.636Cricetulus_griseus_chok1gshd
YMR260C-8664.122ENSCGRG00001005357Eif1a8163.793Cricetulus_griseus_chok1gshd
YMR260C-8665.649ENSCGRG00001022852-8165.517Cricetulus_griseus_chok1gshd
YMR260C-8267.200ENSCGRG00000015188-7065.517Cricetulus_griseus_crigri
YMR260C-8664.122ENSCGRG00000018882Eif1a8163.793Cricetulus_griseus_crigri
YMR260C-7154.128ENSCGRG00000000728-8553.636Cricetulus_griseus_crigri
YMR260C-9560.000ENSCSEG00000015312eif1axb8360.833Cynoglossus_semilaevis
YMR260C-8665.649ENSCVAG00000016422eif1axb8165.517Cyprinodon_variegatus
YMR260C-8664.885ENSDARG00000057912eif1axb8164.655Danio_rerio
YMR260C-10061.438ENSDARG00000029003eif1axa8165.517Danio_rerio
YMR260C-8665.649ENSDNOG00000045675EIF1AX8165.517Dasypus_novemcinctus
YMR260C-8267.200ENSDORG00000011536-8465.517Dipodomys_ordii
YMR260C-8664.885ENSDORG00000030047-8164.655Dipodomys_ordii
YMR260C-9561.486FBgn0026250eIF1A7865.254Drosophila_melanogaster
YMR260C-9557.534ENSETEG00000020091-8160.345Echinops_telfairi
YMR260C-5668.235ENSETEG00000009320-8169.565Echinops_telfairi
YMR260C-8464.341ENSETEG00000001849-8263.793Echinops_telfairi
YMR260C-8467.188ENSEBUG00000008167EIF1AY7767.857Eptatretus_burgeri
YMR260C-8665.649ENSEASG00005014703EIF1AX8165.517Equus_asinus_asinus
YMR260C-8666.412ENSEASG00005009834EIF1AY8467.000Equus_asinus_asinus
YMR260C-8665.649ENSECAG00000006469EIF1AX8165.517Equus_caballus
YMR260C-8651.908ENSEEUG00000007518EIF1AX8150.000Erinaceus_europaeus
YMR260C-8667.176ENSELUG00000021070IF1AX8167.241Esox_lucius
YMR260C-8667.176ENSELUG00000012432eif1ax6869.697Esox_lucius
YMR260C-8665.649ENSFCAG00000035249EIF1AX8667.000Felis_catus
YMR260C-5967.033ENSFALG00000004207EIF1AY8866.304Ficedula_albicollis
YMR260C-8665.649ENSFDAG00000011608-8165.517Fukomys_damarensis
YMR260C-9748.322ENSFDAG00000010943-7050.862Fukomys_damarensis
YMR260C-8665.649ENSFHEG00000006145eif1axb8165.517Fundulus_heteroclitus
YMR260C-8665.649ENSGMOG00000004469eif1axb8165.517Gadus_morhua
YMR260C-8665.649ENSGALG00000016410EIF1AY8165.517Gallus_gallus
YMR260C-8665.649ENSGAFG00000004972eif1axb8165.517Gambusia_affinis
YMR260C-8665.649ENSGACG00000012829eif1axb8165.517Gasterosteus_aculeatus
YMR260C-8665.649ENSGAGG00000023700EIF1AY8667.000Gopherus_agassizii
YMR260C-7963.636ENSGGOG00000043430-8462.931Gorilla_gorilla
YMR260C-7963.636ENSGGOG00000037004-8462.931Gorilla_gorilla
YMR260C-8665.649ENSGGOG00000012186-8667.000Gorilla_gorilla
YMR260C-8665.649ENSHBUG00000011962eif1axb8165.517Haplochromis_burtoni
YMR260C-8665.649ENSHGLG00000001280EIF1AX8165.517Heterocephalus_glaber_female
YMR260C-8265.079ENSHGLG00100018032-8365.517Heterocephalus_glaber_male
YMR260C-7167.890ENSHGLG00100008297-7767.273Heterocephalus_glaber_male
YMR260C-8267.200ENSHGLG00100001863-8465.517Heterocephalus_glaber_male
YMR260C-8665.649ENSHGLG00100020787-8165.517Heterocephalus_glaber_male
YMR260C-8665.649ENSHCOG00000007746eif1axb6665.517Hippocampus_comes
YMR260C-8664.885ENSIPUG00000021259EIF1AX8164.655Ictalurus_punctatus
YMR260C-8664.885ENSIPUG00000013916-8164.655Ictalurus_punctatus
YMR260C-8665.649ENSSTOG00000026117EIF1AX8165.517Ictidomys_tridecemlineatus
YMR260C-8664.122ENSJJAG00000011849-8163.793Jaculus_jaculus
YMR260C-6464.286ENSJJAG00000021591-8263.636Jaculus_jaculus
YMR260C-7458.407ENSJJAG00000021929-7359.794Jaculus_jaculus
YMR260C-8664.122ENSJJAG00000014189-8163.793Jaculus_jaculus
YMR260C-8664.885ENSJJAG00000016949-8165.517Jaculus_jaculus
YMR260C-8665.649ENSKMAG00000011900eif1axb6865.517Kryptolebias_marmoratus
YMR260C-8665.649ENSLBEG00000017217eif1axb8667.000Labrus_bergylta
YMR260C-8665.649ENSLOCG00000003622eif1axb7665.517Lepisosteus_oculatus
YMR260C-8663.636ENSLAFG00000007016EIF1AX8165.517Loxodonta_africana
YMR260C-8665.649ENSMFAG00000000439-8667.000Macaca_fascicularis
YMR260C-8665.649ENSMMUG00000043715EIF1AY8165.517Macaca_mulatta
YMR260C-8465.891ENSMMUG00000000193EIF1AX8667.000Macaca_mulatta
YMR260C-8665.649ENSMNEG00000035197EIF1AX8667.000Macaca_nemestrina
YMR260C-8655.725ENSMLEG00000043398-7855.172Mandrillus_leucophaeus
YMR260C-8665.649ENSMLEG00000031392EIF1AX8667.000Mandrillus_leucophaeus
YMR260C-8665.649ENSMAMG00000008210eif1axb8165.517Mastacembelus_armatus
YMR260C-8665.649ENSMZEG00005020621eif1axb8165.517Maylandia_zebra
YMR260C-8267.200ENSMGAG00000014664EIF1AY8365.517Meleagris_gallopavo
YMR260C-8665.649ENSMAUG00000012396-8165.517Mesocricetus_auratus
YMR260C-8664.122ENSMAUG00000019719-8163.793Mesocricetus_auratus
YMR260C-8665.649ENSMICG00000004110EIF1AX8667.000Microcebus_murinus
YMR260C-8665.649ENSMOCG00000013551-8165.517Microtus_ochrogaster
YMR260C-8665.649ENSMMOG00000013111eif1axb6465.517Mola_mola
YMR260C-8661.832ENSMODG00000024822-8162.069Monodelphis_domestica
YMR260C-8665.649ENSMODG00000027820-8165.517Monodelphis_domestica
YMR260C-8665.649ENSMALG00000017651eif1axb8165.517Monopterus_albus
YMR260C-8664.122MGP_CAROLIEiJ_G0022256Eif1a8163.793Mus_caroli
YMR260C-8665.649MGP_CAROLIEiJ_G0033531-8165.517Mus_caroli
YMR260C-8665.649ENSMUSG00000067194Eif1ax8165.517Mus_musculus
YMR260C-8662.595ENSMUSG00000114075Gm163688162.931Mus_musculus
YMR260C-8662.595ENSMUSG00000113971Gm20228162.069Mus_musculus
YMR260C-9161.429ENSMUSG00000113201Gm219368162.069Mus_musculus
YMR260C-8663.359ENSMUSG00000096619Gm20358162.931Mus_musculus
YMR260C-8663.359ENSMUSG00000095724Gm213198163.793Mus_musculus
YMR260C-8661.069ENSMUSG00000096049Gm20758160.345Mus_musculus
YMR260C-8664.885ENSMUSG00000093847Gm50398164.655Mus_musculus
YMR260C-8662.595ENSMUSG00000095717Gm20568162.069Mus_musculus
YMR260C-8663.359ENSMUSG00000092019Gm40278162.931Mus_musculus
YMR260C-8661.832ENSMUSG00000096803Gm68038161.207Mus_musculus
YMR260C-8662.595ENSMUSG00000079029Gm56628162.069Mus_musculus
YMR260C-8663.359ENSMUSG00000072905Gm20168162.931Mus_musculus
YMR260C-8663.359ENSMUSG00000079031BB2874698162.931Mus_musculus
YMR260C-8664.122ENSMUSG00000057561Eif1a8163.793Mus_musculus
YMR260C-8663.359ENSMUSG00000079034Gm83008162.931Mus_musculus
YMR260C-8664.122ENSMUSG00000113805Gm57888163.793Mus_musculus
YMR260C-8663.359ENSMUSG00000095799Gm83328162.931Mus_musculus
YMR260C-8665.649MGP_PahariEiJ_G0032070-8165.517Mus_pahari
YMR260C-5365.432MGP_PahariEiJ_G0015759-8664.634Mus_pahari
YMR260C-8065.854MGP_SPRETEiJ_G0023167-8666.355Mus_spretus
YMR260C-8665.649MGP_SPRETEiJ_G0034701-8165.517Mus_spretus
YMR260C-8659.542MGP_SPRETEiJ_G0014754-8158.621Mus_spretus
YMR260C-8267.200ENSMPUG00000003337EIF1AX8265.517Mustela_putorius_furo
YMR260C-8665.649ENSMLUG00000029101-8165.517Myotis_lucifugus
YMR260C-8662.121ENSMLUG00000022390-8662.069Myotis_lucifugus
YMR260C-8665.649ENSMLUG00000012977-8165.517Myotis_lucifugus
YMR260C-8665.649ENSNGAG00000018551-8165.517Nannospalax_galili
YMR260C-8651.145ENSNGAG00000015087-7353.922Nannospalax_galili
YMR260C-8664.122ENSNGAG00000016970Eif1a8163.793Nannospalax_galili
YMR260C-6358.333ENSNGAG00000014156-8058.333Nannospalax_galili
YMR260C-8665.649ENSNBRG00000008321eif1axb8165.517Neolamprologus_brichardi
YMR260C-8665.649ENSNLEG00000009913-8667.000Nomascus_leucogenys
YMR260C-8244.000ENSMEUG00000010732-8540.517Notamacropus_eugenii
YMR260C-8067.213ENSODEG00000020083-7267.925Octodon_degus
YMR260C-8643.939ENSODEG00000017860-7244.118Octodon_degus
YMR260C-8665.649ENSODEG00000017687-8165.517Octodon_degus
YMR260C-8665.649ENSONIG00000008209eif1axb8165.517Oreochromis_niloticus
YMR260C-8267.200ENSOANG00000013689EIF1AX8365.517Ornithorhynchus_anatinus
YMR260C-8267.200ENSOCUG00000013646-8365.517Oryctolagus_cuniculus
YMR260C-8664.885ENSOCUG00000010188-8164.655Oryctolagus_cuniculus
YMR260C-8665.649ENSORLG00000002444eif1axb8165.517Oryzias_latipes
YMR260C-8665.649ENSORLG00020013074eif1axb8165.517Oryzias_latipes_hni
YMR260C-8665.649ENSORLG00015010034eif1axb8667.000Oryzias_latipes_hsok
YMR260C-7955.372ENSOMEG00000018980-6754.286Oryzias_melastigma
YMR260C-8462.791ENSOGAG00000024358-7863.717Otolemur_garnettii
YMR260C-8657.252ENSOGAG00000028712-8058.621Otolemur_garnettii
YMR260C-8256.000ENSOGAG00000033839-7857.658Otolemur_garnettii
YMR260C-8267.200ENSOGAG00000008182-8165.517Otolemur_garnettii
YMR260C-8665.649ENSOARG00000015373EIF1AX8165.517Ovis_aries
YMR260C-8665.649ENSPPAG00000033962EIF1AX8667.000Pan_paniscus
YMR260C-8665.649ENSPPRG00000008180-8667.000Panthera_pardus
YMR260C-8665.649ENSPTIG00000012582-8667.000Panthera_tigris_altaica
YMR260C-8665.649ENSPTIG00000002401-8165.517Panthera_tigris_altaica
YMR260C-7267.273ENSPTRG00000021728-7867.010Pan_troglodytes
YMR260C-8666.412ENSPTRG00000022504EIF1AY8166.379Pan_troglodytes
YMR260C-8665.649ENSPANG00000030224-8667.000Papio_anubis
YMR260C-8661.069ENSPANG00000035342-8060.345Papio_anubis
YMR260C-8665.649ENSPKIG00000019062EIF1AX8367.000Paramormyrops_kingsleyae
YMR260C-8665.649ENSPKIG00000012288eif1axa6665.517Paramormyrops_kingsleyae
YMR260C-8267.200ENSPSIG00000004858EIF1AY8165.517Pelodiscus_sinensis
YMR260C-7565.217ENSPMGG00000008528eif1axb7465.657Periophthalmus_magnuspinnatus
YMR260C-8665.649ENSPCIG00000007615EIF1AX8165.517Phascolarctos_cinereus
YMR260C-8665.649ENSPFOG00000002363eif1axb8165.517Poecilia_formosa
YMR260C-8665.649ENSPLAG00000011773eif1axb8165.517Poecilia_latipinna
YMR260C-8665.649ENSPMEG00000005293eif1axb8165.517Poecilia_mexicana
YMR260C-8665.649ENSPREG00000011381eif1axb8167.000Poecilia_reticulata
YMR260C-8665.649ENSPPYG00000020176EIF1AX8165.517Pongo_abelii
YMR260C-8252.800ENSPCAG00000009150EIF1AX8450.000Procavia_capensis
YMR260C-8665.649ENSPCOG00000020014-8667.000Propithecus_coquereli
YMR260C-8664.122ENSPVAG00000003521EIF1AX8063.793Pteropus_vampyrus
YMR260C-8665.649ENSPNYG00000024270eif1axb8165.517Pundamilia_nyererei
YMR260C-8664.885ENSPNAG00000021235eif1axb8164.655Pygocentrus_nattereri
YMR260C-6266.316ENSPNAG00000010444-7165.625Pygocentrus_nattereri
YMR260C-8664.122ENSRNOG00000031421Eif1a8163.793Rattus_norvegicus
YMR260C-8665.649ENSRNOG00000005736Eif1ax8165.517Rattus_norvegicus
YMR260C-6066.304ENSRBIG00000035786-8167.105Rhinopithecus_bieti
YMR260C-6567.677ENSRBIG00000028406-8767.000Rhinopithecus_bieti
YMR260C-8665.649ENSRROG00000042555EIF1AX8667.000Rhinopithecus_roxellana
YMR260C-8665.649ENSRROG00000016917EIF1AY8165.517Rhinopithecus_roxellana
YMR260C-8665.649ENSSBOG00000031558EIF1AX8667.000Saimiri_boliviensis_boliviensis
YMR260C-9848.667ENSSBOG00000029580-8250.000Saimiri_boliviensis_boliviensis
YMR260C-8267.200ENSSHAG00000010995EIF1AX8265.517Sarcophilus_harrisii
YMR260C-8665.649ENSSFOG00015013214EIF1AX8165.517Scleropages_formosus
YMR260C-8665.649ENSSFOG00015017238eif1ax8165.517Scleropages_formosus
YMR260C-8664.122ENSSMAG00000009834eif1axb8163.793Scophthalmus_maximus
YMR260C-8665.649ENSSDUG00000004342eif1axb8165.517Seriola_dumerili
YMR260C-8665.649ENSSLDG00000008477eif1axb8165.517Seriola_lalandi_dorsalis
YMR260C-8659.542ENSSARG00000013528EIF1AX8158.621Sorex_araneus
YMR260C-8665.649ENSSPUG00000018499EIF1AY8667.000Sphenodon_punctatus
YMR260C-8665.649ENSSPAG00000017728eif1axb8165.517Stegastes_partitus
YMR260C-8665.649ENSSSCG00000032223EIF1AX8165.517Sus_scrofa
YMR260C-8665.649ENSSSCG00000037509-7965.517Sus_scrofa
YMR260C-6967.925ENSTGUG00000007524EIF1AX9066.667Taeniopygia_guttata
YMR260C-8667.939ENSTRUG00000007017eif1axb8068.103Takifugu_rubripes
YMR260C-8368.504ENSTNIG00000004558eif1axb7769.369Tetraodon_nigroviridis
YMR260C-8262.698ENSTBEG00000017492EIF1AX8460.684Tupaia_belangeri
YMR260C-8661.069ENSTTRG00000002012EIF1AX8160.345Tursiops_truncatus
YMR260C-8665.649ENSUAMG00000023272-6865.517Ursus_americanus
YMR260C-8658.088ENSUAMG00000028107-7757.143Ursus_americanus
YMR260C-8365.354ENSUMAG00000010717-7764.655Ursus_maritimus
YMR260C-8664.885ENSUMAG00000019373-8164.655Ursus_maritimus
YMR260C-8267.200ENSVPAG00000009927EIF1AX8465.517Vicugna_pacos
YMR260C-8665.649ENSVVUG00000030364-6065.517Vulpes_vulpes
YMR260C-8665.649ENSVVUG00000013024EIF1AX8165.517Vulpes_vulpes
YMR260C-7168.807ENSXETG00000025347eif1ax8165.517Xenopus_tropicalis
YMR260C-8665.649ENSXCOG00000015604eif1axb7465.517Xiphophorus_couchianus
YMR260C-8665.649ENSXMAG00000021594EIF1AY8165.517Xiphophorus_maculatus

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