EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YNL001W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 1161
Position: chrXIV:627456-628616
Accession: S000004946
RBP type: canonical RBP
Summary: Protein that facilitates ribosomal subunit dissociation%3B Dom34-Hbs1 complex and Rli1p have roles in dissociating inactive ribosomes to facilitate translation restart%2C particularly ribosomes stalled in 3' UTRs%3B required for RNA cleavage in no-go decay%2C but reports conflict on endonuclease activity%3B Pelota ortholog%3B protein abundance increases in response to DNA replication stress%3B DOM34 has a paralog%2C YCL001W-B%2C that arose from the whole genome duplication

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YNL001W_mRNA	eRF1_2	PF03464.15	1.4e-32	1	1
YNL001W_mRNA	eRF1_3	PF03465.15	2.8e-25	1	1
YNL001W_mRNA	eRF1_1	PF03463.15	4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YNL001W_mRNA	-	1161	-	YNL001W_mRNA	386 (aa)	-	P33309

Gene Model

Click here to download YNL001W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YNL001W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YNL001W	-	99	34.447	ENSG00000152684	PELO	98	34.447	Homo_sapiens
YNL001W	-	99	32.905	ENSAPOG00000023072	pelo	98	32.905	Acanthochromis_polyacanthus
YNL001W	-	98	35.325	ENSAMEG00000007734	PELO	98	35.325	Ailuropoda_melanoleuca
YNL001W	-	97	31.300	ENSACIG00000014386	pelo	98	31.510	Amphilophus_citrinellus
YNL001W	-	99	32.905	ENSAOCG00000023717	pelo	98	32.905	Amphiprion_ocellaris
YNL001W	-	99	32.905	ENSAPEG00000011235	pelo	98	32.905	Amphiprion_percula
YNL001W	-	97	33.421	ENSATEG00000019550	pelo	97	33.421	Anabas_testudineus
YNL001W	-	75	31.507	ENSAPLG00000013265	PELO	97	31.507	Anas_platyrhynchos
YNL001W	-	97	34.211	ENSACAG00000004352	PELO	98	34.115	Anolis_carolinensis
YNL001W	-	99	34.615	ENSANAG00000014096	PELO	99	34.615	Aotus_nancymaae
YNL001W	-	97	32.895	ENSACLG00000010305	pelo	97	32.895	Astatotilapia_calliptera
YNL001W	-	97	33.069	ENSAMXG00000020299	pelo	96	33.158	Astyanax_mexicanus
YNL001W	-	98	34.115	ENSBTAG00000003268	PELO	97	34.115	Bos_taurus
YNL001W	-	97	30.769	WBGene00011280	pelo-1	97	30.769	Caenorhabditis_elegans
YNL001W	-	99	34.615	ENSCJAG00000035190	PELO	99	34.615	Callithrix_jacchus
YNL001W	-	98	35.325	ENSCAFG00020023234	PELO	98	35.325	Canis_lupus_dingo
YNL001W	-	98	34.115	ENSCHIG00000016410	PELO	97	34.115	Capra_hircus
YNL001W	-	98	34.805	ENSTSYG00000005203	PELO	98	34.805	Carlito_syrichta
YNL001W	-	98	34.805	ENSCPOG00000027406	PELO	98	34.805	Cavia_porcellus
YNL001W	-	99	34.615	ENSCCAG00000035600	PELO	99	34.615	Cebus_capucinus
YNL001W	-	99	34.872	ENSCATG00000011829	PELO	99	34.872	Cercocebus_atys
YNL001W	-	98	34.545	ENSCLAG00000005043	PELO	98	34.545	Chinchilla_lanigera
YNL001W	-	99	34.872	ENSCSAG00000016692	PELO	99	34.872	Chlorocebus_sabaeus
YNL001W	-	98	34.805	ENSCHOG00000000523	PELO	98	34.805	Choloepus_hoffmanni
YNL001W	-	97	34.211	ENSCPBG00000007544	PELO	98	34.115	Chrysemys_picta_bellii
YNL001W	-	98	35.065	ENSCING00000001979	-	99	35.025	Ciona_intestinalis
YNL001W	-	95	34.865	ENSCSAVG00000006158	-	94	34.865	Ciona_savignyi
YNL001W	-	99	34.872	ENSCANG00000023382	PELO	99	34.872	Colobus_angolensis_palliatus
YNL001W	-	98	34.465	ENSCGRG00001024665	Pelo	99	34.615	Cricetulus_griseus_chok1gshd
YNL001W	-	98	34.726	ENSCGRG00000004570	Pelo	99	34.872	Cricetulus_griseus_crigri
YNL001W	-	98	33.246	ENSCSEG00000008807	pelo	97	33.246	Cynoglossus_semilaevis
YNL001W	-	98	32.987	ENSCVAG00000016082	pelo	98	32.987	Cyprinodon_variegatus
YNL001W	-	94	32.065	ENSDARG00000055477	pelo	94	32.065	Danio_rerio
YNL001W	-	95	35.027	ENSDNOG00000036721	PELO	95	35.027	Dasypus_novemcinctus
YNL001W	-	98	35.325	ENSDORG00000016689	Pelo	98	35.325	Dipodomys_ordii
YNL001W	-	93	33.425	FBgn0011207	pelo	92	33.424	Drosophila_melanogaster
YNL001W	-	72	35.294	ENSEBUG00000004955	pelo	96	36.190	Eptatretus_burgeri
YNL001W	-	98	35.065	ENSEASG00005013348	PELO	98	35.065	Equus_asinus_asinus
YNL001W	-	97	32.275	ENSELUG00000023229	pelo	97	32.275	Esox_lucius
YNL001W	-	98	35.065	ENSFCAG00000032341	PELO	98	35.065	Felis_catus
YNL001W	-	99	34.447	ENSFALG00000004559	PELO	99	34.447	Ficedula_albicollis
YNL001W	-	73	31.469	ENSFDAG00000002076	PELO	87	31.469	Fukomys_damarensis
YNL001W	-	99	32.468	ENSFHEG00000009769	pelo	98	32.432	Fundulus_heteroclitus
YNL001W	-	98	32.632	ENSGMOG00000005849	pelo	97	32.804	Gadus_morhua
YNL001W	-	98	32.208	ENSGAFG00000019350	pelo	98	32.208	Gambusia_affinis
YNL001W	-	97	32.895	ENSGACG00000007245	pelo	97	32.895	Gasterosteus_aculeatus
YNL001W	-	97	34.211	ENSGAGG00000004018	PELO	98	34.115	Gopherus_agassizii
YNL001W	-	99	34.872	ENSGGOG00000012635	PELO	99	34.872	Gorilla_gorilla
YNL001W	-	97	32.895	ENSHBUG00000005866	pelo	97	32.895	Haplochromis_burtoni
YNL001W	-	98	34.805	ENSHGLG00000005932	PELO	98	34.805	Heterocephalus_glaber_female
YNL001W	-	98	33.766	ENSHGLG00100017627	PELO	98	33.766	Heterocephalus_glaber_male
YNL001W	-	97	32.105	ENSHCOG00000016782	pelo	97	32.105	Hippocampus_comes
YNL001W	-	96	32.440	ENSIPUG00000020627	pelo	94	32.440	Ictalurus_punctatus
YNL001W	-	98	34.545	ENSSTOG00000027378	PELO	98	34.545	Ictidomys_tridecemlineatus
YNL001W	-	98	33.854	ENSJJAG00000015032	Pelo	98	33.854	Jaculus_jaculus
YNL001W	-	99	32.208	ENSKMAG00000021305	pelo	97	32.208	Kryptolebias_marmoratus
YNL001W	-	97	33.158	ENSLBEG00000022399	pelo	97	33.158	Labrus_bergylta
YNL001W	-	98	35.065	ENSLAFG00000020551	PELO	98	35.065	Loxodonta_africana
YNL001W	-	99	34.872	ENSMFAG00000000651	PELO	99	34.872	Macaca_fascicularis
YNL001W	-	99	34.872	ENSMMUG00000039101	PELO	99	34.872	Macaca_mulatta
YNL001W	-	99	34.872	ENSMNEG00000035538	PELO	99	34.872	Macaca_nemestrina
YNL001W	-	99	34.872	ENSMLEG00000039113	PELO	99	34.872	Mandrillus_leucophaeus
YNL001W	-	97	33.333	ENSMAMG00000013260	pelo	97	33.421	Mastacembelus_armatus
YNL001W	-	97	32.895	ENSMZEG00005014258	pelo	97	32.895	Maylandia_zebra
YNL001W	-	99	34.872	ENSMAUG00000009770	Pelo	99	34.872	Mesocricetus_auratus
YNL001W	-	98	34.805	ENSMICG00000044040	PELO	98	34.805	Microcebus_murinus
YNL001W	-	98	34.805	ENSMOCG00000017554	Pelo	98	34.805	Microtus_ochrogaster
YNL001W	-	98	33.594	ENSMMOG00000001324	pelo	98	33.594	Mola_mola
YNL001W	-	99	32.987	ENSMALG00000008194	pelo	97	32.987	Monopterus_albus
YNL001W	-	98	34.545	MGP_CAROLIEiJ_G0018915	Pelo	98	34.545	Mus_caroli
YNL001W	-	98	34.286	ENSMUSG00000042275	Pelo	98	34.286	Mus_musculus
YNL001W	-	98	34.545	MGP_PahariEiJ_G0015985	Pelo	98	34.545	Mus_pahari
YNL001W	-	98	34.286	MGP_SPRETEiJ_G0019793	Pelo	98	34.286	Mus_spretus
YNL001W	-	98	35.156	ENSMLUG00000024132	PELO	98	35.156	Myotis_lucifugus
YNL001W	-	99	35.309	ENSNGAG00000019331	Pelo	99	35.309	Nannospalax_galili
YNL001W	-	97	32.368	ENSNBRG00000011799	pelo	97	32.368	Neolamprologus_brichardi
YNL001W	-	99	34.872	ENSNLEG00000035970	PELO	99	34.872	Nomascus_leucogenys
YNL001W	-	98	33.854	ENSMEUG00000005468	PELO	98	33.854	Notamacropus_eugenii
YNL001W	-	98	34.031	ENSOPRG00000018793	PELO	99	34.031	Ochotona_princeps
YNL001W	-	98	35.065	ENSODEG00000017579	PELO	98	35.065	Octodon_degus
YNL001W	-	96	32.533	ENSONIG00000011511	pelo	98	32.987	Oreochromis_niloticus
YNL001W	-	98	34.635	ENSOCUG00000023902	PELO	98	34.635	Oryctolagus_cuniculus
YNL001W	-	97	32.895	ENSORLG00000005827	pelo	97	32.895	Oryzias_latipes
YNL001W	-	97	33.158	ENSORLG00020016456	pelo	97	33.158	Oryzias_latipes_hni
YNL001W	-	97	33.158	ENSORLG00015014447	pelo	97	33.158	Oryzias_latipes_hsok
YNL001W	-	98	33.333	ENSOMEG00000021567	pelo	98	33.333	Oryzias_melastigma
YNL001W	-	98	35.065	ENSOGAG00000027940	PELO	98	35.065	Otolemur_garnettii
YNL001W	-	98	34.115	ENSOARG00000008324	PELO	97	34.115	Ovis_aries
YNL001W	-	99	34.872	ENSPPAG00000038951	PELO	99	34.872	Pan_paniscus
YNL001W	-	98	35.065	ENSPPRG00000018800	PELO	98	35.065	Panthera_pardus
YNL001W	-	98	35.065	ENSPTIG00000019988	PELO	98	35.065	Panthera_tigris_altaica
YNL001W	-	99	34.190	ENSPTRG00000034409	PELO	98	34.190	Pan_troglodytes
YNL001W	-	99	34.872	ENSPANG00000010902	PELO	99	34.872	Papio_anubis
YNL001W	-	94	33.152	ENSPKIG00000015190	pelo	94	33.152	Paramormyrops_kingsleyae
YNL001W	-	97	34.474	ENSPSIG00000004971	PELO	98	34.375	Pelodiscus_sinensis
YNL001W	-	66	30.502	ENSPMGG00000014561	pelo	92	30.502	Periophthalmus_magnuspinnatus
YNL001W	-	98	34.545	ENSPEMG00000015584	Pelo	98	34.545	Peromyscus_maniculatus_bairdii
YNL001W	-	98	35.156	ENSPCIG00000004880	PELO	98	35.156	Phascolarctos_cinereus
YNL001W	-	98	32.727	ENSPFOG00000007277	pelo	98	32.727	Poecilia_formosa
YNL001W	-	98	32.727	ENSPLAG00000020787	pelo	98	32.727	Poecilia_latipinna
YNL001W	-	98	32.727	ENSPMEG00000016964	pelo	98	32.727	Poecilia_mexicana
YNL001W	-	98	32.727	ENSPREG00000023071	pelo	98	32.727	Poecilia_reticulata
YNL001W	-	98	34.987	ENSPPYG00000015451	PELO	95	35.128	Pongo_abelii
YNL001W	-	98	34.805	ENSPCOG00000021178	PELO	98	34.805	Propithecus_coquereli
YNL001W	-	97	32.895	ENSPNYG00000017325	pelo	97	32.895	Pundamilia_nyererei
YNL001W	-	97	32.804	ENSPNAG00000012458	pelo	98	32.727	Pygocentrus_nattereri
YNL001W	-	98	35.065	ENSRNOG00000061128	Pelo	98	35.065	Rattus_norvegicus
YNL001W	-	99	34.872	ENSRBIG00000007299	PELO	99	34.872	Rhinopithecus_bieti
YNL001W	-	99	34.872	ENSRROG00000035507	PELO	99	34.872	Rhinopithecus_roxellana
YNL001W	-	99	34.615	ENSSBOG00000036140	PELO	99	34.615	Saimiri_boliviensis_boliviensis
YNL001W	-	62	40.167	ENSSHAG00000010770	PELO	98	40.167	Sarcophilus_harrisii
YNL001W	-	98	32.199	ENSSFOG00015013399	pelo	97	32.368	Scleropages_formosus
YNL001W	-	98	32.812	ENSSMAG00000017171	pelo	98	32.812	Scophthalmus_maximus
YNL001W	-	99	33.247	ENSSDUG00000022938	pelo	97	33.247	Seriola_dumerili
YNL001W	-	99	31.948	ENSSLDG00000017884	pelo	97	31.948	Seriola_lalandi_dorsalis
YNL001W	-	97	34.211	ENSSPUG00000005545	PELO	98	34.115	Sphenodon_punctatus
YNL001W	-	98	32.199	ENSSPAG00000008501	pelo	97	32.368	Stegastes_partitus
YNL001W	-	98	34.545	ENSSSCG00000016884	PELO	98	34.545	Sus_scrofa
YNL001W	-	99	33.933	ENSTGUG00000002416	PELO	99	33.933	Taeniopygia_guttata
YNL001W	-	97	33.158	ENSTRUG00000005809	pelo	97	33.158	Takifugu_rubripes
YNL001W	-	98	32.723	ENSTNIG00000018937	pelo	97	32.723	Tetraodon_nigroviridis
YNL001W	-	98	34.545	ENSTTRG00000001857	PELO	98	34.545	Tursiops_truncatus
YNL001W	-	98	35.325	ENSUAMG00000002535	PELO	98	35.325	Ursus_americanus
YNL001W	-	98	35.325	ENSUMAG00000005809	PELO	98	35.325	Ursus_maritimus
YNL001W	-	98	34.805	ENSVPAG00000001113	PELO	98	34.805	Vicugna_pacos
YNL001W	-	98	35.325	ENSVVUG00000025499	PELO	98	35.325	Vulpes_vulpes
YNL001W	-	82	35.938	ENSXETG00000018368	pelo	98	35.692	Xenopus_tropicalis
YNL001W	-	98	32.987	ENSXMAG00000018474	pelo	98	32.987	Xiphophorus_maculatus